RNA–Protein interactions for RNA: ENST00000217381.2

SNTA1-201, Transcript of syntrophin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTA1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTA1-201ENST00000217381 NISCHQ9Y2I1 1504 aa50.81■■■■■ 5.72
SNTA1-201ENST00000217381 CCDC180Q9P1Z9 1646 aa43.44■■■■■ 4.55
SNTA1-201ENST00000217381 ZCCHC6Q5VYS8 1495 aaKnown RBP42.99■■■■■ 4.47
SNTA1-201ENST00000217381 SHROOM4Q9ULL8 1493 aa42.83■■■■■ 4.45
SNTA1-201ENST00000217381 SUPT5HO00267 1087 aaKnown RBP41.89■■■■■ 4.3
SNTA1-201ENST00000217381 DCAF1Q9Y4B6 1507 aa41.82■■■■■ 4.29
SNTA1-201ENST00000217381 DCAF8L2P0C7V8 631 aa41.71■■■■■ 4.27
SNTA1-201ENST00000217381 CHIC1Q5VXU3 224 aa40.87■■■■■ 4.13
SNTA1-201ENST00000217381 MYO15BQ96JP2 1530 aa40.75■■■■■ 4.11
SNTA1-201ENST00000217381 ABCC9O60706 1549 aa40.61■■■■■ 4.09
SNTA1-201ENST00000217381 SCRIBQ14160 1630 aa40.48■■■■■ 4.07
SNTA1-201ENST00000217381 NACADO15069 1562 aa40.13■■■■■ 4.01
SNTA1-201ENST00000217381 RSF1Q96T23 1441 aaPredicted RBP40.07■■■■■ 4.01
SNTA1-201ENST00000217381 RB1CC1Q8TDY2 1594 aa39.65■■■■□ 3.94
SNTA1-201ENST00000217381 HRCP23327 699 aa39.62■■■■□ 3.93
SNTA1-201ENST00000217381 CECR2Q9BXF3 1484 aa39.57■■■■□ 3.92
SNTA1-201ENST00000217381 LOC105371045A0A1W2PR82 267 aa39.54■■■■□ 3.92
SNTA1-201ENST00000217381 PCGF6Q9BYE7 350 aa39.49■■■■□ 3.91
SNTA1-201ENST00000217381 MROH2BQ7Z745 1585 aa39.46■■■■□ 3.91
SNTA1-201ENST00000217381 WIZO95785 1651 aa39.24■■■■□ 3.87
SNTA1-201ENST00000217381 TRIM41Q8WV44 630 aa39.09■■■■□ 3.85
SNTA1-201ENST00000217381 BAZ1AQ9NRL2 1556 aaPredicted RBP39.06■■■■□ 3.84
SNTA1-201ENST00000217381 UNC13AQ9UPW8 1703 aa39■■■■□ 3.83
SNTA1-201ENST00000217381 TRIM26Q12899 539 aaPredicted RBP38.85■■■■□ 3.81
SNTA1-201ENST00000217381 EIF4G1Q04637 1599 aaKnown RBP38.8■■■■□ 3.8
SNTA1-201ENST00000217381 SMARCA4P51532 1647 aa38.78■■■■□ 3.8
SNTA1-201ENST00000217381 TOP2AP11388 1531 aaKnown RBP38.68■■■■□ 3.78
SNTA1-201ENST00000217381 PPARGC1BQ86YN6 1023 aaKnown RBP38.67■■■■□ 3.78
SNTA1-201ENST00000217381 FAM9AQ8IZU1 332 aaPredicted RBP38.66■■■■□ 3.78
SNTA1-201ENST00000217381 BICRAQ9NZM4 1560 aa38.48■■■■□ 3.75
SNTA1-201ENST00000217381 SMARCA2P51531 1590 aa38.46■■■■□ 3.75
SNTA1-201ENST00000217381 CCDC88BA6NC98 1476 aa38.42■■■■□ 3.74
SNTA1-201ENST00000217381 PABPN1Q86U42 306 aaKnown RBP eCLIP38.37■■■■□ 3.73
SNTA1-201ENST00000217381 EHMT2Q96KQ7 1210 aa38.23■■■■□ 3.71
SNTA1-201ENST00000217381 ABCC8Q09428 1581 aa38.23■■■■□ 3.71
SNTA1-201ENST00000217381 PEG3Q9GZU2 1588 aa38.13■■■■□ 3.69
SNTA1-201ENST00000217381 ZEB1P37275 1124 aaPredicted RBP38.04■■■■□ 3.68
SNTA1-201ENST00000217381 SOGA1O94964 1423 aa37.79■■■■□ 3.64
SNTA1-201ENST00000217381 ATAD2BQ9ULI0 1458 aa37.77■■■■□ 3.64
SNTA1-201ENST00000217381 EEA1Q15075 1411 aa37.65■■■■□ 3.62
SNTA1-201ENST00000217381 RUSC2Q8N2Y8 1516 aa37.63■■■■□ 3.61
SNTA1-201ENST00000217381 BAZ1BQ9UIG0 1483 aaKnown RBP37.61■■■■□ 3.61
SNTA1-201ENST00000217381 WRNQ14191 1432 aaPredicted RBP eCLIP37.6■■■■□ 3.61
SNTA1-201ENST00000217381 CEP162Q5TB80 1403 aa37.54■■■■□ 3.6
SNTA1-201ENST00000217381 SYNJ1O43426 1573 aa37.52■■■■□ 3.6
SNTA1-201ENST00000217381 TNIKQ9UKE5 1360 aa37.52■■■■□ 3.6
SNTA1-201ENST00000217381 CSRNP3Q8WYN3 585 aa37.49■■■■□ 3.59
SNTA1-201ENST00000217381 GOLGA3Q08378 1498 aa37.35■■■■□ 3.57
SNTA1-201ENST00000217381 KIF21BO75037 1637 aa37.23■■■■□ 3.55
SNTA1-201ENST00000217381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.21■■■■□ 3.55
SNTA1-201ENST00000217381 UBTFP17480 764 aaKnown RBP37.2■■■■□ 3.55
SNTA1-201ENST00000217381 CEP164Q9UPV0 1460 aa37.17■■■■□ 3.54
SNTA1-201ENST00000217381 HMGXB3Q12766 1538 aa37.14■■■■□ 3.54
SNTA1-201ENST00000217381 CCER1Q8TC90 406 aaPredicted RBP37.13■■■■□ 3.53
SNTA1-201ENST00000217381 TOP2BQ02880 1626 aa37.11■■■■□ 3.53
SNTA1-201ENST00000217381 NCAPD3P42695 1498 aa37.1■■■■□ 3.53
SNTA1-201ENST00000217381 TTBK1Q5TCY1 1321 aaPredicted RBP37.04■■■■□ 3.52
SNTA1-201ENST00000217381 BIVM-ERCC5R4GMW8 1640 aa37.04■■■■□ 3.52
SNTA1-201ENST00000217381 RAPGEF2Q9Y4G8 1499 aa36.91■■■■□ 3.5
SNTA1-201ENST00000217381 CLIP1P30622 1438 aa36.86■■■■□ 3.49
SNTA1-201ENST00000217381 CUX1P39880 1505 aa36.77■■■■□ 3.48
SNTA1-201ENST00000217381 CFTRP13569 1480 aa36.74■■■■□ 3.47
SNTA1-201ENST00000217381 VPS8Q8N3P4 1428 aa36.73■■■■□ 3.47
SNTA1-201ENST00000217381 ERICH3Q5RHP9 1530 aa36.66■■■■□ 3.46
SNTA1-201ENST00000217381 PRXQ9BXM0 1461 aa36.66■■■■□ 3.46
SNTA1-201ENST00000217381 CC2D2AQ9P2K1 1620 aa36.62■■■■□ 3.45
SNTA1-201ENST00000217381 PRDM2Q13029 1718 aa36.58■■■■□ 3.45
SNTA1-201ENST00000217381 KIF27Q86VH2 1401 aa36.46■■■■□ 3.43
SNTA1-201ENST00000217381 SCAF1Q9H7N4 1312 aaKnown RBP36.44■■■■□ 3.42
SNTA1-201ENST00000217381 DIEXFQ68CQ4 756 aaKnown RBP36.42■■■■□ 3.42
SNTA1-201ENST00000217381 ARAP1Q96P48 1450 aa36.4■■■■□ 3.42
SNTA1-201ENST00000217381 APLP2Q06481 763 aa36.39■■■■□ 3.42
SNTA1-201ENST00000217381 RANGAP1P46060 587 aaPredicted RBP36.39■■■■□ 3.42
SNTA1-201ENST00000217381 HNRNPUL2Q1KMD3 747 aaKnown RBP36.36■■■■□ 3.41
SNTA1-201ENST00000217381 CADPSQ9ULU8 1353 aa36.3■■■■□ 3.4
SNTA1-201ENST00000217381 ZNF316A6NFI3 1004 aaPredicted RBP36.2■■■■□ 3.39
SNTA1-201ENST00000217381 ACIN1Q9UKV3 1341 aaKnown RBP36.15■■■■□ 3.38
SNTA1-201ENST00000217381 CUX2O14529 1486 aa36.14■■■■□ 3.38
SNTA1-201ENST00000217381 DNAJC5BQ9UF47 199 aa36.13■■■■□ 3.37
SNTA1-201ENST00000217381 ARHGAP35Q9NRY4 1499 aa36.1■■■■□ 3.37
SNTA1-201ENST00000217381 FGD5Q6ZNL6 1462 aa36.1■■■■□ 3.37
SNTA1-201ENST00000217381 IGF1RP08069 1367 aa36.08■■■■□ 3.37
SNTA1-201ENST00000217381 NEUROD1Q13562 356 aa36.06■■■■□ 3.36
SNTA1-201ENST00000217381 KANK4Q5T7N3 995 aaPredicted RBP36.02■■■■□ 3.36
SNTA1-201ENST00000217381 FANCD2Q9BXW9 1451 aa35.96■■■■□ 3.35
SNTA1-201ENST00000217381 CENPBP07199 599 aaPredicted RBP35.94■■■■□ 3.34
SNTA1-201ENST00000217381 CARMIL1Q5VZK9 1371 aa35.9■■■■□ 3.34
SNTA1-201ENST00000217381 RRBP1Q9P2E9 1410 aaKnown RBP35.89■■■■□ 3.34
SNTA1-201ENST00000217381 DNMBPQ6XZF7 1577 aa35.84■■■■□ 3.33
SNTA1-201ENST00000217381 CLSPNQ9HAW4 1339 aa35.83■■■■□ 3.33
SNTA1-201ENST00000217381 DHX57Q6P158 1386 aaKnown RBP35.81■■■■□ 3.32
SNTA1-201ENST00000217381 NESP48681 1621 aa35.75■■■■□ 3.31
SNTA1-201ENST00000217381 TOPBP1Q92547 1522 aa35.74■■■■□ 3.31
SNTA1-201ENST00000217381 ABCA10Q8WWZ4 1543 aa35.72■■■■□ 3.31
SNTA1-201ENST00000217381 PELP1Q8IZL8 1130 aaKnown RBP35.72■■■■□ 3.31
SNTA1-201ENST00000217381 POLA1P09884 1462 aaPredicted RBP35.71■■■■□ 3.31
SNTA1-201ENST00000217381 RAD54L2Q9Y4B4 1467 aa35.71■■■■□ 3.31
SNTA1-201ENST00000217381 MAP3K1Q13233 1512 aa35.7■■■■□ 3.31
SNTA1-201ENST00000217381 TIAM1Q13009 1591 aa35.7■■■■□ 3.31
SNTA1-201ENST00000217381 CCNB3Q8WWL7 1395 aa35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms