RNA–Protein interactions for RNA: ENST00000403562.5

PRKAR1B-203, Transcript of protein kinase cAMP-dependent type I regulatory subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1B, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1B-203ENST00000403562 NISCHQ9Y2I1 1504 aa54.39■■■■■ 6.3
PRKAR1B-203ENST00000403562 CCDC180Q9P1Z9 1646 aa47.84■■■■■ 5.25
PRKAR1B-203ENST00000403562 ABCC9O60706 1549 aa46.02■■■■■ 4.96
PRKAR1B-203ENST00000403562 ZCCHC6Q5VYS8 1495 aaKnown RBP45.53■■■■■ 4.88
PRKAR1B-203ENST00000403562 DCAF8L2P0C7V8 631 aa45.12■■■■■ 4.81
PRKAR1B-203ENST00000403562 DCAF1Q9Y4B6 1507 aa44.98■■■■■ 4.79
PRKAR1B-203ENST00000403562 MYO15BQ96JP2 1530 aa44.78■■■■■ 4.76
PRKAR1B-203ENST00000403562 NACADO15069 1562 aa44.76■■■■■ 4.76
PRKAR1B-203ENST00000403562 RB1CC1Q8TDY2 1594 aa44.58■■■■■ 4.73
PRKAR1B-203ENST00000403562 SHROOM4Q9ULL8 1493 aa44.02■■■■■ 4.64
PRKAR1B-203ENST00000403562 SCRIBQ14160 1630 aa43.86■■■■■ 4.61
PRKAR1B-203ENST00000403562 UNC13AQ9UPW8 1703 aa43.67■■■■■ 4.58
PRKAR1B-203ENST00000403562 BICRAQ9NZM4 1560 aa43.3■■■■■ 4.52
PRKAR1B-203ENST00000403562 PABPN1Q86U42 306 aaKnown RBP eCLIP43.21■■■■■ 4.51
PRKAR1B-203ENST00000403562 SUPT5HO00267 1087 aaKnown RBP42.82■■■■■ 4.45
PRKAR1B-203ENST00000403562 CECR2Q9BXF3 1484 aa42.35■■■■■ 4.37
PRKAR1B-203ENST00000403562 BAZ1AQ9NRL2 1556 aaPredicted RBP42.05■■■■■ 4.32
PRKAR1B-203ENST00000403562 EIF4G1Q04637 1599 aaKnown RBP42.05■■■■■ 4.32
PRKAR1B-203ENST00000403562 SMARCA4P51532 1647 aa42■■■■■ 4.31
PRKAR1B-203ENST00000403562 MROH2BQ7Z745 1585 aa41.99■■■■■ 4.31
PRKAR1B-203ENST00000403562 RSF1Q96T23 1441 aaPredicted RBP41.85■■■■■ 4.29
PRKAR1B-203ENST00000403562 CC2D2AQ9P2K1 1620 aa41.65■■■■■ 4.26
PRKAR1B-203ENST00000403562 WIZO95785 1651 aa41.59■■■■■ 4.25
PRKAR1B-203ENST00000403562 PEG3Q9GZU2 1588 aa41.54■■■■■ 4.24
PRKAR1B-203ENST00000403562 ATAD2BQ9ULI0 1458 aa41.54■■■■■ 4.24
PRKAR1B-203ENST00000403562 CHIC1Q5VXU3 224 aa41.5■■■■■ 4.23
PRKAR1B-203ENST00000403562 SMARCA2P51531 1590 aa41.47■■■■■ 4.23
PRKAR1B-203ENST00000403562 DNAJC5BQ9UF47 199 aa41.44■■■■■ 4.22
PRKAR1B-203ENST00000403562 NCAPD3P42695 1498 aa41.33■■■■■ 4.21
PRKAR1B-203ENST00000403562 BAZ1BQ9UIG0 1483 aaKnown RBP41.23■■■■■ 4.19
PRKAR1B-203ENST00000403562 HMGXB3Q12766 1538 aa41.2■■■■■ 4.19
PRKAR1B-203ENST00000403562 TOP2AP11388 1531 aaKnown RBP41.14■■■■■ 4.18
PRKAR1B-203ENST00000403562 CCDC88BA6NC98 1476 aa40.7■■■■■ 4.11
PRKAR1B-203ENST00000403562 CADPSQ9ULU8 1353 aa40.2■■■■■ 4.03
PRKAR1B-203ENST00000403562 TRIM41Q8WV44 630 aa40.17■■■■■ 4.02
PRKAR1B-203ENST00000403562 CFTRP13569 1480 aa40.17■■■■■ 4.02
PRKAR1B-203ENST00000403562 NESP48681 1621 aa40.15■■■■■ 4.02
PRKAR1B-203ENST00000403562 LAMC3Q9Y6N6 1575 aa40.06■■■■■ 4
PRKAR1B-203ENST00000403562 LOC105371045A0A1W2PR82 267 aa39.95■■■■□ 3.99
PRKAR1B-203ENST00000403562 PRDM2Q13029 1718 aa39.88■■■■□ 3.97
PRKAR1B-203ENST00000403562 PDS5BQ9NTI5 1447 aa39.75■■■■□ 3.95
PRKAR1B-203ENST00000403562 FANCD2Q9BXW9 1451 aa39.75■■■■□ 3.95
PRKAR1B-203ENST00000403562 KIF21AQ7Z4S6 1674 aa39.65■■■■□ 3.94
PRKAR1B-203ENST00000403562 CEP164Q9UPV0 1460 aa39.58■■■■□ 3.93
PRKAR1B-203ENST00000403562 ABCC8Q09428 1581 aa39.56■■■■□ 3.92
PRKAR1B-203ENST00000403562 ERCC6Q03468 1493 aa39.53■■■■□ 3.92
PRKAR1B-203ENST00000403562 FAM9AQ8IZU1 332 aaPredicted RBP39.49■■■■□ 3.91
PRKAR1B-203ENST00000403562 WRNQ14191 1432 aaPredicted RBP eCLIP39.4■■■■□ 3.98e-6■■■■■ 51.9
PRKAR1B-203ENST00000403562 CUX1P39880 1505 aa39.32■■■■□ 3.89
PRKAR1B-203ENST00000403562 URB2Q14146 1524 aaKnown RBP39.32■■■■□ 3.89
PRKAR1B-203ENST00000403562 MRC2Q9UBG0 1479 aa39.32■■■■□ 3.88
PRKAR1B-203ENST00000403562 SYNJ1O43426 1573 aa39.3■■■■□ 3.88
PRKAR1B-203ENST00000403562 THOC2Q8NI27 1593 aaKnown RBP39.26■■■■□ 3.88
PRKAR1B-203ENST00000403562 DNMBPQ6XZF7 1577 aa39.23■■■■□ 3.87
PRKAR1B-203ENST00000403562 TOPBP1Q92547 1522 aa39.23■■■■□ 3.87
PRKAR1B-203ENST00000403562 PCGF6Q9BYE7 350 aa39.22■■■■□ 3.87
PRKAR1B-203ENST00000403562 TOP2BQ02880 1626 aa39.2■■■■□ 3.87
PRKAR1B-203ENST00000403562 BIVM-ERCC5R4GMW8 1640 aa39.17■■■■□ 3.86
PRKAR1B-203ENST00000403562 WDR62O43379 1518 aa39.17■■■■□ 3.86
PRKAR1B-203ENST00000403562 EEA1Q15075 1411 aa39.07■■■■□ 3.84
PRKAR1B-203ENST00000403562 FGD5Q6ZNL6 1462 aa39.02■■■■□ 3.84
PRKAR1B-203ENST00000403562 POLA1P09884 1462 aaPredicted RBP38.98■■■■□ 3.83
PRKAR1B-203ENST00000403562 TRIM26Q12899 539 aaPredicted RBP38.97■■■■□ 3.83
PRKAR1B-203ENST00000403562 SOGA1O94964 1423 aa38.93■■■■□ 3.82
PRKAR1B-203ENST00000403562 HRCP23327 699 aa38.93■■■■□ 3.82
PRKAR1B-203ENST00000403562 EHMT2Q96KQ7 1210 aa38.91■■■■□ 3.82
PRKAR1B-203ENST00000403562 CUX2O14529 1486 aa38.86■■■■□ 3.81
PRKAR1B-203ENST00000403562 RAD54L2Q9Y4B4 1467 aa38.83■■■■□ 3.81
PRKAR1B-203ENST00000403562 RUSC2Q8N2Y8 1516 aa38.75■■■■□ 3.79
PRKAR1B-203ENST00000403562 TARBP1Q13395 1621 aaKnown RBP38.73■■■■□ 3.79
PRKAR1B-203ENST00000403562 CSRNP3Q8WYN3 585 aa38.69■■■■□ 3.78
PRKAR1B-203ENST00000403562 IFT140Q96RY7 1462 aa38.69■■■■□ 3.78
PRKAR1B-203ENST00000403562 ABCA10Q8WWZ4 1543 aa38.66■■■■□ 3.78
PRKAR1B-203ENST00000403562 WDR97A6NE52 1622 aa38.63■■■■□ 3.77
PRKAR1B-203ENST00000403562 TNIKQ9UKE5 1360 aa38.63■■■■□ 3.77
PRKAR1B-203ENST00000403562 GOLGA3Q08378 1498 aa38.6■■■■□ 3.77
PRKAR1B-203ENST00000403562 KIF21BO75037 1637 aa38.6■■■■□ 3.77
PRKAR1B-203ENST00000403562 ZNF608Q9ULD9 1512 aaPredicted RBP38.54■■■■□ 3.76
PRKAR1B-203ENST00000403562 CEP162Q5TB80 1403 aa38.53■■■■□ 3.76
PRKAR1B-203ENST00000403562 TDRD9Q8NDG6 1382 aaKnown RBP38.52■■■■□ 3.76
PRKAR1B-203ENST00000403562 KIF27Q86VH2 1401 aa38.47■■■■□ 3.75
PRKAR1B-203ENST00000403562 AQRO60306 1485 aaKnown RBP eCLIP38.44■■■■□ 3.74
PRKAR1B-203ENST00000403562 ABCA5Q8WWZ7 1642 aa38.43■■■■□ 3.74
PRKAR1B-203ENST00000403562 EIF4G3O43432 1585 aaKnown RBP38.39■■■■□ 3.74
PRKAR1B-203ENST00000403562 GAPVD1Q14C86 1478 aa38.37■■■■□ 3.73
PRKAR1B-203ENST00000403562 UBTFP17480 764 aaKnown RBP38.32■■■■□ 3.72
PRKAR1B-203ENST00000403562 IGF1RP08069 1367 aa38.24■■■■□ 3.71
PRKAR1B-203ENST00000403562 PBRM1Q86U86 1689 aa38.22■■■■□ 3.71
PRKAR1B-203ENST00000403562 GRIN2BQ13224 1484 aa38.21■■■■□ 3.71
PRKAR1B-203ENST00000403562 ERICH3Q5RHP9 1530 aa38.19■■■■□ 3.7
PRKAR1B-203ENST00000403562 RAPGEF2Q9Y4G8 1499 aa38.11■■■■□ 3.69
PRKAR1B-203ENST00000403562 SNAPC4Q5SXM2 1469 aa38.07■■■■□ 3.69
PRKAR1B-203ENST00000403562 PRXQ9BXM0 1461 aa38.02■■■■□ 3.68
PRKAR1B-203ENST00000403562 CARMIL1Q5VZK9 1371 aa38.02■■■■□ 3.68
PRKAR1B-203ENST00000403562 CUL7Q14999 1698 aa38.01■■■■□ 3.68
PRKAR1B-203ENST00000403562 PPARGC1BQ86YN6 1023 aaKnown RBP38.01■■■■□ 3.68
PRKAR1B-203ENST00000403562 ADAMTS12P58397 1594 aa37.99■■■■□ 3.67
PRKAR1B-203ENST00000403562 MAGI1Q96QZ7 1491 aaPredicted RBP37.99■■■■□ 3.67
PRKAR1B-203ENST00000403562 CLIP1P30622 1438 aa37.99■■■■□ 3.67
PRKAR1B-203ENST00000403562 FHAD1B1AJZ9 1412 aa37.94■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms