RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 NISCHQ9Y2I1 1504 aa55.11■■■■■ 6.41
DHFR-203ENST00000505337 CCDC180Q9P1Z9 1646 aa48.98■■■■■ 5.43
DHFR-203ENST00000505337 ABCC9O60706 1549 aa48.13■■■■■ 5.29
DHFR-203ENST00000505337 ZCCHC6Q5VYS8 1495 aaKnown RBP46.38■■■■■ 5.01
DHFR-203ENST00000505337 RB1CC1Q8TDY2 1594 aa46.18■■■■■ 4.98
DHFR-203ENST00000505337 NACADO15069 1562 aa46.11■■■■■ 4.97
DHFR-203ENST00000505337 DCAF8L2P0C7V8 631 aa46.09■■■■■ 4.97
DHFR-203ENST00000505337 MYO15BQ96JP2 1530 aa45.8■■■■■ 4.92
DHFR-203ENST00000505337 DCAF1Q9Y4B6 1507 aa45.57■■■■■ 4.89
DHFR-203ENST00000505337 UNC13AQ9UPW8 1703 aa45.17■■■■■ 4.82
DHFR-203ENST00000505337 SHROOM4Q9ULL8 1493 aa45.09■■■■■ 4.81
DHFR-203ENST00000505337 PABPN1Q86U42 306 aaKnown RBP eCLIP44.98■■■■■ 4.791e-6■■■■■ 27.9
DHFR-203ENST00000505337 BICRAQ9NZM4 1560 aa44.87■■■■■ 4.77
DHFR-203ENST00000505337 SCRIBQ14160 1630 aa44.73■■■■■ 4.75
DHFR-203ENST00000505337 DNAJC5BQ9UF47 199 aa44.38■■■■■ 4.7
DHFR-203ENST00000505337 EIF4G1Q04637 1599 aaKnown RBP43.66■■■■■ 4.58
DHFR-203ENST00000505337 SUPT5HO00267 1087 aaKnown RBP43.53■■■■■ 4.56
DHFR-203ENST00000505337 CC2D2AQ9P2K1 1620 aa43.52■■■■■ 4.56
DHFR-203ENST00000505337 CECR2Q9BXF3 1484 aa43.24■■■■■ 4.51
DHFR-203ENST00000505337 RSF1Q96T23 1441 aaPredicted RBP42.81■■■■■ 4.44
DHFR-203ENST00000505337 SMARCA4P51532 1647 aa42.77■■■■■ 4.44
DHFR-203ENST00000505337 BAZ1AQ9NRL2 1556 aaPredicted RBP42.69■■■■■ 4.42
DHFR-203ENST00000505337 ATAD2BQ9ULI0 1458 aa42.6■■■■■ 4.41
DHFR-203ENST00000505337 NCAPD3P42695 1498 aa42.59■■■■■ 4.41
DHFR-203ENST00000505337 MROH2BQ7Z745 1585 aa42.54■■■■■ 4.4
DHFR-203ENST00000505337 SMARCA2P51531 1590 aa42.48■■■■■ 4.39
DHFR-203ENST00000505337 PEG3Q9GZU2 1588 aa42.36■■■■■ 4.37
DHFR-203ENST00000505337 HMGXB3Q12766 1538 aa42.33■■■■■ 4.37
DHFR-203ENST00000505337 WIZO95785 1651 aa42.3■■■■■ 4.36
DHFR-203ENST00000505337 BAZ1BQ9UIG0 1483 aaKnown RBP42.2■■■■■ 4.35
DHFR-203ENST00000505337 CHIC1Q5VXU3 224 aa41.99■■■■■ 4.31
DHFR-203ENST00000505337 TOP2AP11388 1531 aaKnown RBP41.83■■■■■ 4.29
DHFR-203ENST00000505337 NESP48681 1621 aa41.64■■■■■ 4.26
DHFR-203ENST00000505337 LAMC3Q9Y6N6 1575 aa41.44■■■■■ 4.22
DHFR-203ENST00000505337 ERCC6Q03468 1493 aa41.44■■■■■ 4.22
DHFR-203ENST00000505337 CADPSQ9ULU8 1353 aa41.34■■■■■ 4.21
DHFR-203ENST00000505337 CCDC88BA6NC98 1476 aa41.32■■■■■ 4.21
DHFR-203ENST00000505337 PDS5BQ9NTI5 1447 aa41.17■■■■■ 4.18
DHFR-203ENST00000505337 KIF21AQ7Z4S6 1674 aa41.09■■■■■ 4.17
DHFR-203ENST00000505337 CFTRP13569 1480 aa41.08■■■■■ 4.17
DHFR-203ENST00000505337 CUX2O14529 1486 aa41.06■■■■■ 4.16
DHFR-203ENST00000505337 THOC2Q8NI27 1593 aaKnown RBP41■■■■■ 4.15
DHFR-203ENST00000505337 TRIM41Q8WV44 630 aa40.88■■■■■ 4.13
DHFR-203ENST00000505337 FANCD2Q9BXW9 1451 aa40.85■■■■■ 4.13
DHFR-203ENST00000505337 CEP164Q9UPV0 1460 aa40.79■■■■■ 4.12
DHFR-203ENST00000505337 MRC2Q9UBG0 1479 aa40.77■■■■■ 4.12
DHFR-203ENST00000505337 ABCC8Q09428 1581 aa40.7■■■■■ 4.11
DHFR-203ENST00000505337 PRDM2Q13029 1718 aa40.67■■■■■ 4.1
DHFR-203ENST00000505337 WDR62O43379 1518 aa40.66■■■■■ 4.1
DHFR-203ENST00000505337 URB2Q14146 1524 aaKnown RBP40.48■■■■■ 4.07
DHFR-203ENST00000505337 LOC105371045A0A1W2PR82 267 aa40.36■■■■■ 4.05
DHFR-203ENST00000505337 WRNQ14191 1432 aaPredicted RBP eCLIP40.27■■■■■ 4.04
DHFR-203ENST00000505337 SYNJ1O43426 1573 aa40.24■■■■■ 4.03
DHFR-203ENST00000505337 TOPBP1Q92547 1522 aa40.19■■■■■ 4.02
DHFR-203ENST00000505337 FAM9AQ8IZU1 332 aaPredicted RBP40.14■■■■■ 4.02
DHFR-203ENST00000505337 DNMBPQ6XZF7 1577 aa40.11■■■■■ 4.01
DHFR-203ENST00000505337 BIVM-ERCC5R4GMW8 1640 aa40.04■■■■■ 4
DHFR-203ENST00000505337 TOP2BQ02880 1626 aa40.02■■■■■ 4
DHFR-203ENST00000505337 DNAJC5Q9H3Z4 198 aa40.01■■■■■ 4
DHFR-203ENST00000505337 EEA1Q15075 1411 aa39.95■■■■□ 3.99
DHFR-203ENST00000505337 IFT140Q96RY7 1462 aa39.94■■■■□ 3.99
DHFR-203ENST00000505337 SOGA1O94964 1423 aa39.93■■■■□ 3.98
DHFR-203ENST00000505337 CUX1P39880 1505 aa39.86■■■■□ 3.97
DHFR-203ENST00000505337 POLA1P09884 1462 aaPredicted RBP39.85■■■■□ 3.97
DHFR-203ENST00000505337 ZNF608Q9ULD9 1512 aaPredicted RBP39.84■■■■□ 3.97
DHFR-203ENST00000505337 RUSC2Q8N2Y8 1516 aa39.79■■■■□ 3.96
DHFR-203ENST00000505337 TARBP1Q13395 1621 aaKnown RBP39.77■■■■□ 3.96
DHFR-203ENST00000505337 FGD5Q6ZNL6 1462 aa39.73■■■■□ 3.95
DHFR-203ENST00000505337 RAD54L2Q9Y4B4 1467 aa39.7■■■■□ 3.95
DHFR-203ENST00000505337 EIF4G3O43432 1585 aaKnown RBP39.62■■■■□ 3.93
DHFR-203ENST00000505337 AQRO60306 1485 aaKnown RBP eCLIP39.59■■■■□ 3.932e-19■■■□□ 14.9
DHFR-203ENST00000505337 KIF21BO75037 1637 aa39.57■■■■□ 3.92
DHFR-203ENST00000505337 CSRNP3Q8WYN3 585 aa39.55■■■■□ 3.92
DHFR-203ENST00000505337 EHMT2Q96KQ7 1210 aa39.54■■■■□ 3.92
DHFR-203ENST00000505337 TDRD9Q8NDG6 1382 aaKnown RBP39.49■■■■□ 3.91
DHFR-203ENST00000505337 GOLGA3Q08378 1498 aa39.45■■■■□ 3.91
DHFR-203ENST00000505337 WDR97A6NE52 1622 aa39.39■■■■□ 3.9
DHFR-203ENST00000505337 OSCARQ8IYS5 282 aa39.37■■■■□ 3.89
DHFR-203ENST00000505337 TNIKQ9UKE5 1360 aa39.36■■■■□ 3.89
DHFR-203ENST00000505337 ABCA10Q8WWZ4 1543 aa39.33■■■■□ 3.89
DHFR-203ENST00000505337 CEP162Q5TB80 1403 aa39.24■■■■□ 3.87
DHFR-203ENST00000505337 GRIN2BQ13224 1484 aa39.21■■■■□ 3.87
DHFR-203ENST00000505337 GAPVD1Q14C86 1478 aa39.2■■■■□ 3.87
DHFR-203ENST00000505337 SNAPC4Q5SXM2 1469 aa39.19■■■■□ 3.86
DHFR-203ENST00000505337 ABCA5Q8WWZ7 1642 aa39.18■■■■□ 3.86
DHFR-203ENST00000505337 KIF27Q86VH2 1401 aa39.18■■■■□ 3.86
DHFR-203ENST00000505337 ERICH3Q5RHP9 1530 aa39.17■■■■□ 3.86
DHFR-203ENST00000505337 CHD1O14646 1710 aa39.14■■■■□ 3.86
DHFR-203ENST00000505337 RAPGEF2Q9Y4G8 1499 aa39.13■■■■□ 3.86
DHFR-203ENST00000505337 PRXQ9BXM0 1461 aa39.11■■■■□ 3.85
DHFR-203ENST00000505337 MAGI1Q96QZ7 1491 aaPredicted RBP39.11■■■■□ 3.85
DHFR-203ENST00000505337 PBRM1Q86U86 1689 aa39.1■■■■□ 3.85
DHFR-203ENST00000505337 FBLN2P98095 1184 aa39.1■■■■□ 3.85
DHFR-203ENST00000505337 UBTFP17480 764 aaKnown RBP39.04■■■■□ 3.84
DHFR-203ENST00000505337 PCGF6Q9BYE7 350 aa39.01■■■■□ 3.84
DHFR-203ENST00000505337 SYNJ2O15056 1496 aa38.97■■■■□ 3.83
DHFR-203ENST00000505337 CHMP7Q8WUX9 453 aaPredicted RBP38.97■■■■□ 3.83
DHFR-203ENST00000505337 TRIM26Q12899 539 aaPredicted RBP38.91■■■■□ 3.82
DHFR-203ENST00000505337 ADAMTS12P58397 1594 aa38.81■■■■□ 3.8
DHFR-203ENST00000505337 CLIP1P30622 1438 aa38.79■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms