RNA–Protein interactions for RNA: ENST00000408973.2

LCNL1-201, Transcript of lipocalin like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LCNL1, Length 1,839 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-201ENST00000408973 NISCHQ9Y2I1 1504 aa54.22■■■■■ 6.27
LCNL1-201ENST00000408973 CCDC180Q9P1Z9 1646 aa47■■■■■ 5.12
LCNL1-201ENST00000408973 ZCCHC6Q5VYS8 1495 aaKnown RBP45.67■■■■■ 4.9
LCNL1-201ENST00000408973 DCAF1Q9Y4B6 1507 aa44.82■■■■■ 4.77
LCNL1-201ENST00000408973 SHROOM4Q9ULL8 1493 aa44.72■■■■■ 4.75
LCNL1-201ENST00000408973 DCAF8L2P0C7V8 631 aa44.63■■■■■ 4.73
LCNL1-201ENST00000408973 MYO15BQ96JP2 1530 aa44.05■■■■■ 4.64
LCNL1-201ENST00000408973 ABCC9O60706 1549 aa43.9■■■■■ 4.62
LCNL1-201ENST00000408973 NACADO15069 1562 aa43.62■■■■■ 4.57
LCNL1-201ENST00000408973 SUPT5HO00267 1087 aaKnown RBP43.34■■■■■ 4.53
LCNL1-201ENST00000408973 SCRIBQ14160 1630 aa43.34■■■■■ 4.53
LCNL1-201ENST00000408973 RB1CC1Q8TDY2 1594 aa43.12■■■■■ 4.49
LCNL1-201ENST00000408973 RSF1Q96T23 1441 aaPredicted RBP42.3■■■■■ 4.36
LCNL1-201ENST00000408973 UNC13AQ9UPW8 1703 aa42.29■■■■■ 4.36
LCNL1-201ENST00000408973 CECR2Q9BXF3 1484 aa42.07■■■■■ 4.33
LCNL1-201ENST00000408973 MROH2BQ7Z745 1585 aa41.92■■■■■ 4.3
LCNL1-201ENST00000408973 BAZ1AQ9NRL2 1556 aaPredicted RBP41.83■■■■■ 4.29
LCNL1-201ENST00000408973 CHIC1Q5VXU3 224 aa41.8■■■■■ 4.28
LCNL1-201ENST00000408973 BICRAQ9NZM4 1560 aa41.77■■■■■ 4.28
LCNL1-201ENST00000408973 WIZO95785 1651 aa41.64■■■■■ 4.26
LCNL1-201ENST00000408973 SMARCA4P51532 1647 aa41.57■■■■■ 4.24
LCNL1-201ENST00000408973 PABPN1Q86U42 306 aaKnown RBP eCLIP41.52■■■■■ 4.24
LCNL1-201ENST00000408973 TOP2AP11388 1531 aaKnown RBP41.21■■■■■ 4.19
LCNL1-201ENST00000408973 PEG3Q9GZU2 1588 aa41■■■■■ 4.15
LCNL1-201ENST00000408973 SMARCA2P51531 1590 aa40.84■■■■■ 4.13
LCNL1-201ENST00000408973 CCDC88BA6NC98 1476 aa40.79■■■■■ 4.12
LCNL1-201ENST00000408973 EIF4G1Q04637 1599 aaKnown RBP40.75■■■■■ 4.11
LCNL1-201ENST00000408973 TRIM41Q8WV44 630 aa40.71■■■■■ 4.11
LCNL1-201ENST00000408973 ATAD2BQ9ULI0 1458 aa40.7■■■■■ 4.11
LCNL1-201ENST00000408973 BAZ1BQ9UIG0 1483 aaKnown RBP40.55■■■■■ 4.08
LCNL1-201ENST00000408973 HMGXB3Q12766 1538 aa40.26■■■■■ 4.03
LCNL1-201ENST00000408973 NCAPD3P42695 1498 aa40.23■■■■■ 4.03
LCNL1-201ENST00000408973 LOC105371045A0A1W2PR82 267 aa40.23■■■■■ 4.03
LCNL1-201ENST00000408973 ABCC8Q09428 1581 aa40.15■■■■■ 4.02
LCNL1-201ENST00000408973 FAM9AQ8IZU1 332 aaPredicted RBP40■■■■□ 3.99
LCNL1-201ENST00000408973 WRNQ14191 1432 aaPredicted RBP eCLIP39.82■■■■□ 3.97
LCNL1-201ENST00000408973 CC2D2AQ9P2K1 1620 aa39.74■■■■□ 3.95
LCNL1-201ENST00000408973 SYNJ1O43426 1573 aa39.63■■■■□ 3.93
LCNL1-201ENST00000408973 EEA1Q15075 1411 aa39.61■■■■□ 3.93
LCNL1-201ENST00000408973 CFTRP13569 1480 aa39.53■■■■□ 3.92
LCNL1-201ENST00000408973 SOGA1O94964 1423 aa39.51■■■■□ 3.92
LCNL1-201ENST00000408973 PRDM2Q13029 1718 aa39.43■■■■□ 3.9
LCNL1-201ENST00000408973 TOP2BQ02880 1626 aa39.43■■■■□ 3.9
LCNL1-201ENST00000408973 EHMT2Q96KQ7 1210 aa39.42■■■■□ 3.9
LCNL1-201ENST00000408973 BIVM-ERCC5R4GMW8 1640 aa39.39■■■■□ 3.9
LCNL1-201ENST00000408973 RUSC2Q8N2Y8 1516 aa39.33■■■■□ 3.89
LCNL1-201ENST00000408973 CSRNP3Q8WYN3 585 aa39.31■■■■□ 3.88
LCNL1-201ENST00000408973 CADPSQ9ULU8 1353 aa39.26■■■■□ 3.88
LCNL1-201ENST00000408973 CUX1P39880 1505 aa39.16■■■■□ 3.86
LCNL1-201ENST00000408973 GOLGA3Q08378 1498 aa39.1■■■■□ 3.85
LCNL1-201ENST00000408973 PCGF6Q9BYE7 350 aa39.08■■■■□ 3.85
LCNL1-201ENST00000408973 TNIKQ9UKE5 1360 aa39.08■■■■□ 3.85
LCNL1-201ENST00000408973 KIF21BO75037 1637 aa39.06■■■■□ 3.84
LCNL1-201ENST00000408973 CEP164Q9UPV0 1460 aa39.03■■■■□ 3.84
LCNL1-201ENST00000408973 TRIM26Q12899 539 aaPredicted RBP38.93■■■■□ 3.82
LCNL1-201ENST00000408973 CEP162Q5TB80 1403 aa38.92■■■■□ 3.82
LCNL1-201ENST00000408973 UBTFP17480 764 aaKnown RBP38.9■■■■□ 3.82
LCNL1-201ENST00000408973 FANCD2Q9BXW9 1451 aa38.86■■■■□ 3.81
LCNL1-201ENST00000408973 LAMC3Q9Y6N6 1575 aa38.8■■■■□ 3.8
LCNL1-201ENST00000408973 KIF27Q86VH2 1401 aa38.77■■■■□ 3.8
LCNL1-201ENST00000408973 NESP48681 1621 aa38.72■■■■□ 3.79
LCNL1-201ENST00000408973 RAPGEF2Q9Y4G8 1499 aa38.69■■■■□ 3.78
LCNL1-201ENST00000408973 ERICH3Q5RHP9 1530 aa38.67■■■■□ 3.78
LCNL1-201ENST00000408973 FGD5Q6ZNL6 1462 aa38.64■■■■□ 3.78
LCNL1-201ENST00000408973 PRXQ9BXM0 1461 aa38.64■■■■□ 3.78
LCNL1-201ENST00000408973 DNMBPQ6XZF7 1577 aa38.63■■■■□ 3.78
LCNL1-201ENST00000408973 CUX2O14529 1486 aa38.53■■■■□ 3.76
LCNL1-201ENST00000408973 TOPBP1Q92547 1522 aa38.5■■■■□ 3.75
LCNL1-201ENST00000408973 PDS5BQ9NTI5 1447 aa38.49■■■■□ 3.75
LCNL1-201ENST00000408973 HRCP23327 699 aa38.48■■■■□ 3.75
LCNL1-201ENST00000408973 CLIP1P30622 1438 aa38.48■■■■□ 3.75
LCNL1-201ENST00000408973 DNAJC5BQ9UF47 199 aa38.47■■■■□ 3.75
LCNL1-201ENST00000408973 POLA1P09884 1462 aaPredicted RBP38.35■■■■□ 3.73
LCNL1-201ENST00000408973 IGF1RP08069 1367 aa38.33■■■■□ 3.73
LCNL1-201ENST00000408973 URB2Q14146 1524 aaKnown RBP38.32■■■■□ 3.73
LCNL1-201ENST00000408973 ABCA10Q8WWZ4 1543 aa38.31■■■■□ 3.72
LCNL1-201ENST00000408973 PPARGC1BQ86YN6 1023 aaKnown RBP38.31■■■■□ 3.72
LCNL1-201ENST00000408973 KIF21AQ7Z4S6 1674 aa38.29■■■■□ 3.72
LCNL1-201ENST00000408973 RAD54L2Q9Y4B4 1467 aa38.25■■■■□ 3.71
LCNL1-201ENST00000408973 VPS8Q8N3P4 1428 aa38.23■■■■□ 3.71
LCNL1-201ENST00000408973 CARMIL1Q5VZK9 1371 aa38.17■■■■□ 3.7
LCNL1-201ENST00000408973 WDR97A6NE52 1622 aa38.14■■■■□ 3.7
LCNL1-201ENST00000408973 RANGAP1P46060 587 aaPredicted RBP38.08■■■■□ 3.69
LCNL1-201ENST00000408973 CUL7Q14999 1698 aa38.03■■■■□ 3.68
LCNL1-201ENST00000408973 ARAP1Q96P48 1450 aa38.02■■■■□ 3.68
LCNL1-201ENST00000408973 MRC2Q9UBG0 1479 aa37.96■■■■□ 3.67
LCNL1-201ENST00000408973 ABCA5Q8WWZ7 1642 aa37.95■■■■□ 3.67
LCNL1-201ENST00000408973 APLP2Q06481 763 aa37.92■■■■□ 3.66
LCNL1-201ENST00000408973 TTBK1Q5TCY1 1321 aaPredicted RBP37.9■■■■□ 3.66
LCNL1-201ENST00000408973 ARHGAP35Q9NRY4 1499 aa37.88■■■■□ 3.65
LCNL1-201ENST00000408973 TARBP1Q13395 1621 aaKnown RBP37.87■■■■□ 3.65
LCNL1-201ENST00000408973 GAPVD1Q14C86 1478 aa37.85■■■■□ 3.65
LCNL1-201ENST00000408973 TDRD9Q8NDG6 1382 aaKnown RBP37.81■■■■□ 3.64
LCNL1-201ENST00000408973 ZEB1P37275 1124 aaPredicted RBP37.75■■■■□ 3.63
LCNL1-201ENST00000408973 WDR62O43379 1518 aa37.72■■■■□ 3.63
LCNL1-201ENST00000408973 CTTNBP2Q8WZ74 1663 aa37.71■■■■□ 3.63
LCNL1-201ENST00000408973 PBRM1Q86U86 1689 aa37.62■■■■□ 3.61
LCNL1-201ENST00000408973 ERCC6Q03468 1493 aa37.6■■■■□ 3.61
LCNL1-201ENST00000408973 IFT140Q96RY7 1462 aa37.59■■■■□ 3.61
LCNL1-201ENST00000408973 EFCAB5A4FU69 1503 aa37.58■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms