RNA–Protein interactions for RNA: ENST00000239614.8

MSANTD2-201, Transcript of Myb/SANT DNA binding domain containing 2, humanhuman

TSL 2 BASIC

Gene MSANTD2, Length 2,495 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD2-201ENST00000239614 NISCHQ9Y2I1 1504 aa52.52■■■■■ 6
MSANTD2-201ENST00000239614 CCDC180Q9P1Z9 1646 aa44.98■■■■■ 4.79
MSANTD2-201ENST00000239614 ZCCHC6Q5VYS8 1495 aaKnown RBP44.33■■■■■ 4.69
MSANTD2-201ENST00000239614 SHROOM4Q9ULL8 1493 aa44.16■■■■■ 4.66
MSANTD2-201ENST00000239614 DCAF8L2P0C7V8 631 aa43.42■■■■■ 4.54
MSANTD2-201ENST00000239614 DCAF1Q9Y4B6 1507 aa43.19■■■■■ 4.5
MSANTD2-201ENST00000239614 SUPT5HO00267 1087 aaKnown RBP43.06■■■■■ 4.48
MSANTD2-201ENST00000239614 MYO15BQ96JP2 1530 aa42.16■■■■■ 4.34
MSANTD2-201ENST00000239614 SCRIBQ14160 1630 aa41.92■■■■■ 4.3
MSANTD2-201ENST00000239614 ABCC9O60706 1549 aa41.91■■■■■ 4.3
MSANTD2-201ENST00000239614 CHIC1Q5VXU3 224 aa41.74■■■■■ 4.27
MSANTD2-201ENST00000239614 NACADO15069 1562 aa41.67■■■■■ 4.26
MSANTD2-201ENST00000239614 RSF1Q96T23 1441 aaPredicted RBP41.33■■■■■ 4.21
MSANTD2-201ENST00000239614 RB1CC1Q8TDY2 1594 aa41.06■■■■■ 4.16
MSANTD2-201ENST00000239614 CECR2Q9BXF3 1484 aa40.94■■■■■ 4.14
MSANTD2-201ENST00000239614 MROH2BQ7Z745 1585 aa40.77■■■■■ 4.12
MSANTD2-201ENST00000239614 WIZO95785 1651 aa40.52■■■■■ 4.08
MSANTD2-201ENST00000239614 UNC13AQ9UPW8 1703 aa40.49■■■■■ 4.07
MSANTD2-201ENST00000239614 LOC105371045A0A1W2PR82 267 aa40.4■■■■■ 4.06
MSANTD2-201ENST00000239614 BAZ1AQ9NRL2 1556 aaPredicted RBP40.38■■■■■ 4.05
MSANTD2-201ENST00000239614 TRIM41Q8WV44 630 aa40.21■■■■■ 4.03
MSANTD2-201ENST00000239614 SMARCA4P51532 1647 aa40.11■■■■■ 4.01
MSANTD2-201ENST00000239614 BICRAQ9NZM4 1560 aa40■■■■□ 3.99
MSANTD2-201ENST00000239614 PABPN1Q86U42 306 aaKnown RBP eCLIP39.92■■■■□ 3.985e-8■■■□□ 16.1
MSANTD2-201ENST00000239614 TOP2AP11388 1531 aaKnown RBP39.92■■■■□ 3.98
MSANTD2-201ENST00000239614 EIF4G1Q04637 1599 aaKnown RBP39.82■■■■□ 3.97
MSANTD2-201ENST00000239614 PCGF6Q9BYE7 350 aa39.79■■■■□ 3.96
MSANTD2-201ENST00000239614 FAM9AQ8IZU1 332 aaPredicted RBP39.77■■■■□ 3.96
MSANTD2-201ENST00000239614 CCDC88BA6NC98 1476 aa39.7■■■■□ 3.95
MSANTD2-201ENST00000239614 SMARCA2P51531 1590 aa39.68■■■■□ 3.94
MSANTD2-201ENST00000239614 HRCP23327 699 aa39.5■■■■□ 3.91
MSANTD2-201ENST00000239614 PEG3Q9GZU2 1588 aa39.44■■■■□ 3.9
MSANTD2-201ENST00000239614 ABCC8Q09428 1581 aa39.38■■■■□ 3.89
MSANTD2-201ENST00000239614 EHMT2Q96KQ7 1210 aa39.35■■■■□ 3.89
MSANTD2-201ENST00000239614 TRIM26Q12899 539 aaPredicted RBP39.25■■■■□ 3.87
MSANTD2-201ENST00000239614 ATAD2BQ9ULI0 1458 aa39.19■■■■□ 3.86
MSANTD2-201ENST00000239614 BAZ1BQ9UIG0 1483 aaKnown RBP39.02■■■■□ 3.84
MSANTD2-201ENST00000239614 SOGA1O94964 1423 aa38.91■■■■□ 3.82
MSANTD2-201ENST00000239614 WRNQ14191 1432 aaPredicted RBP eCLIP38.81■■■■□ 3.82e-11■■■■■ 54.3
MSANTD2-201ENST00000239614 RUSC2Q8N2Y8 1516 aa38.75■■■■□ 3.79
MSANTD2-201ENST00000239614 EEA1Q15075 1411 aa38.7■■■■□ 3.79
MSANTD2-201ENST00000239614 PPARGC1BQ86YN6 1023 aaKnown RBP38.69■■■■□ 3.78
MSANTD2-201ENST00000239614 SYNJ1O43426 1573 aa38.67■■■■□ 3.78
MSANTD2-201ENST00000239614 CSRNP3Q8WYN3 585 aa38.64■■■■□ 3.78
MSANTD2-201ENST00000239614 NCAPD3P42695 1498 aa38.55■■■■□ 3.76
MSANTD2-201ENST00000239614 HMGXB3Q12766 1538 aa38.52■■■■□ 3.76
MSANTD2-201ENST00000239614 TNIKQ9UKE5 1360 aa38.51■■■■□ 3.75
MSANTD2-201ENST00000239614 CEP162Q5TB80 1403 aa38.48■■■■□ 3.75
MSANTD2-201ENST00000239614 GOLGA3Q08378 1498 aa38.36■■■■□ 3.73
MSANTD2-201ENST00000239614 UBTFP17480 764 aaKnown RBP38.35■■■■□ 3.73
MSANTD2-201ENST00000239614 TOP2BQ02880 1626 aa38.28■■■■□ 3.72
MSANTD2-201ENST00000239614 CEP164Q9UPV0 1460 aa38.22■■■■□ 3.71
MSANTD2-201ENST00000239614 KIF21BO75037 1637 aa38.21■■■■□ 3.71
MSANTD2-201ENST00000239614 BIVM-ERCC5R4GMW8 1640 aa38.17■■■■□ 3.7
MSANTD2-201ENST00000239614 ZEB1P37275 1124 aaPredicted RBP38.14■■■■□ 3.7
MSANTD2-201ENST00000239614 CFTRP13569 1480 aa38.09■■■■□ 3.69
MSANTD2-201ENST00000239614 RAPGEF2Q9Y4G8 1499 aa38■■■■□ 3.67
MSANTD2-201ENST00000239614 CUX1P39880 1505 aa38■■■■□ 3.67
MSANTD2-201ENST00000239614 TTBK1Q5TCY1 1321 aaPredicted RBP37.96■■■■□ 3.67
MSANTD2-201ENST00000239614 CLIP1P30622 1438 aa37.88■■■■□ 3.65
MSANTD2-201ENST00000239614 CC2D2AQ9P2K1 1620 aa37.82■■■■□ 3.64
MSANTD2-201ENST00000239614 PRDM2Q13029 1718 aa37.81■■■■□ 3.64
MSANTD2-201ENST00000239614 PRXQ9BXM0 1461 aa37.75■■■■□ 3.63
MSANTD2-201ENST00000239614 CADPSQ9ULU8 1353 aa37.73■■■■□ 3.63
MSANTD2-201ENST00000239614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.73■■■■□ 3.63
MSANTD2-201ENST00000239614 ERICH3Q5RHP9 1530 aa37.7■■■■□ 3.63
MSANTD2-201ENST00000239614 VPS8Q8N3P4 1428 aa37.68■■■■□ 3.62
MSANTD2-201ENST00000239614 KIF27Q86VH2 1401 aa37.66■■■■□ 3.62
MSANTD2-201ENST00000239614 RANGAP1P46060 587 aaPredicted RBP37.62■■■■□ 3.61
MSANTD2-201ENST00000239614 CCER1Q8TC90 406 aaPredicted RBP37.58■■■■□ 3.61
MSANTD2-201ENST00000239614 CUX2O14529 1486 aa37.39■■■■□ 3.58
MSANTD2-201ENST00000239614 FGD5Q6ZNL6 1462 aa37.38■■■■□ 3.57
MSANTD2-201ENST00000239614 ARAP1Q96P48 1450 aa37.37■■■■□ 3.57
MSANTD2-201ENST00000239614 APLP2Q06481 763 aa37.37■■■■□ 3.57
MSANTD2-201ENST00000239614 FANCD2Q9BXW9 1451 aa37.35■■■■□ 3.57
MSANTD2-201ENST00000239614 IGF1RP08069 1367 aa37.32■■■■□ 3.57
MSANTD2-201ENST00000239614 NESP48681 1621 aa37.22■■■■□ 3.55
MSANTD2-201ENST00000239614 HNRNPUL2Q1KMD3 747 aaKnown RBP37.16■■■■□ 3.54
MSANTD2-201ENST00000239614 ARHGAP35Q9NRY4 1499 aa37.15■■■■□ 3.54
MSANTD2-201ENST00000239614 DNMBPQ6XZF7 1577 aa37.13■■■■□ 3.53
MSANTD2-201ENST00000239614 CARMIL1Q5VZK9 1371 aa37.13■■■■□ 3.53
MSANTD2-201ENST00000239614 TOPBP1Q92547 1522 aa37.07■■■■□ 3.53
MSANTD2-201ENST00000239614 KANK4Q5T7N3 995 aaPredicted RBP37.04■■■■□ 3.52
MSANTD2-201ENST00000239614 RAD54L2Q9Y4B4 1467 aa37.04■■■■□ 3.52
MSANTD2-201ENST00000239614 POLA1P09884 1462 aaPredicted RBP37.02■■■■□ 3.52
MSANTD2-201ENST00000239614 LAMC3Q9Y6N6 1575 aa36.98■■■■□ 3.51
MSANTD2-201ENST00000239614 ABCA10Q8WWZ4 1543 aa36.98■■■■□ 3.51
MSANTD2-201ENST00000239614 DNAJC5BQ9UF47 199 aa36.93■■■■□ 3.5
MSANTD2-201ENST00000239614 URB2Q14146 1524 aaKnown RBP36.86■■■■□ 3.49
MSANTD2-201ENST00000239614 RRBP1Q9P2E9 1410 aaKnown RBP36.74■■■■□ 3.47
MSANTD2-201ENST00000239614 WDR97A6NE52 1622 aa36.72■■■■□ 3.47
MSANTD2-201ENST00000239614 PDS5BQ9NTI5 1447 aa36.71■■■■□ 3.47
MSANTD2-201ENST00000239614 CUL7Q14999 1698 aa36.7■■■■□ 3.46
MSANTD2-201ENST00000239614 TIAM1Q13009 1591 aa36.65■■■■□ 3.46
MSANTD2-201ENST00000239614 MAP3K1Q13233 1512 aa36.64■■■■□ 3.46
MSANTD2-201ENST00000239614 KIF21AQ7Z4S6 1674 aa36.63■■■■□ 3.45
MSANTD2-201ENST00000239614 P3H3Q8IVL6 736 aa36.61■■■■□ 3.45
MSANTD2-201ENST00000239614 TDRD9Q8NDG6 1382 aaKnown RBP36.59■■■■□ 3.45
MSANTD2-201ENST00000239614 CCNB3Q8WWL7 1395 aa36.58■■■■□ 3.45
MSANTD2-201ENST00000239614 ABCA5Q8WWZ7 1642 aa36.57■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms