RNA–Protein interactions for RNA: ENST00000546355.3

RFLNA-205, Transcript of refilin A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RFLNA, Length 2,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFLNA-205ENST00000546355 NISCHQ9Y2I1 1504 aa52.83■■■■■ 6.05
RFLNA-205ENST00000546355 CCDC180Q9P1Z9 1646 aa45.28■■■■■ 4.84
RFLNA-205ENST00000546355 ZCCHC6Q5VYS8 1495 aaKnown RBP44.59■■■■■ 4.73
RFLNA-205ENST00000546355 SHROOM4Q9ULL8 1493 aa44.43■■■■■ 4.7
RFLNA-205ENST00000546355 DCAF8L2P0C7V8 631 aa43.82■■■■■ 4.61
RFLNA-205ENST00000546355 DCAF1Q9Y4B6 1507 aa43.43■■■■■ 4.54
RFLNA-205ENST00000546355 SUPT5HO00267 1087 aaKnown RBP43.29■■■■■ 4.52
RFLNA-205ENST00000546355 MYO15BQ96JP2 1530 aa42.43■■■■■ 4.38
RFLNA-205ENST00000546355 ABCC9O60706 1549 aa42.34■■■■■ 4.37
RFLNA-205ENST00000546355 SCRIBQ14160 1630 aa42.24■■■■■ 4.35
RFLNA-205ENST00000546355 NACADO15069 1562 aa42■■■■■ 4.31
RFLNA-205ENST00000546355 CHIC1Q5VXU3 224 aa41.82■■■■■ 4.29
RFLNA-205ENST00000546355 RSF1Q96T23 1441 aaPredicted RBP41.53■■■■■ 4.24
RFLNA-205ENST00000546355 RB1CC1Q8TDY2 1594 aa41.44■■■■■ 4.22
RFLNA-205ENST00000546355 CECR2Q9BXF3 1484 aa41.18■■■■■ 4.18
RFLNA-205ENST00000546355 MROH2BQ7Z745 1585 aa41■■■■■ 4.15
RFLNA-205ENST00000546355 WIZO95785 1651 aa40.73■■■■■ 4.11
RFLNA-205ENST00000546355 UNC13AQ9UPW8 1703 aa40.72■■■■■ 4.11
RFLNA-205ENST00000546355 BAZ1AQ9NRL2 1556 aaPredicted RBP40.66■■■■■ 4.1
RFLNA-205ENST00000546355 LOC105371045A0A1W2PR82 267 aa40.49■■■■■ 4.07
RFLNA-205ENST00000546355 TRIM41Q8WV44 630 aa40.43■■■■■ 4.06
RFLNA-205ENST00000546355 SMARCA4P51532 1647 aa40.37■■■■■ 4.05
RFLNA-205ENST00000546355 PABPN1Q86U42 306 aaKnown RBP eCLIP40.32■■■■■ 4.04
RFLNA-205ENST00000546355 BICRAQ9NZM4 1560 aa40.27■■■■■ 4.04
RFLNA-205ENST00000546355 TOP2AP11388 1531 aaKnown RBP40.17■■■■■ 4.02
RFLNA-205ENST00000546355 FAM9AQ8IZU1 332 aaPredicted RBP39.99■■■■□ 3.99
RFLNA-205ENST00000546355 EIF4G1Q04637 1599 aaKnown RBP39.96■■■■□ 3.99
RFLNA-205ENST00000546355 CCDC88BA6NC98 1476 aa39.93■■■■□ 3.98
RFLNA-205ENST00000546355 SMARCA2P51531 1590 aa39.9■■■■□ 3.98
RFLNA-205ENST00000546355 PCGF6Q9BYE7 350 aa39.83■■■■□ 3.97
RFLNA-205ENST00000546355 PEG3Q9GZU2 1588 aa39.66■■■■□ 3.94
RFLNA-205ENST00000546355 EHMT2Q96KQ7 1210 aa39.61■■■■□ 3.93
RFLNA-205ENST00000546355 ABCC8Q09428 1581 aa39.58■■■■□ 3.93
RFLNA-205ENST00000546355 ATAD2BQ9ULI0 1458 aa39.48■■■■□ 3.91
RFLNA-205ENST00000546355 HRCP23327 699 aa39.44■■■■□ 3.9
RFLNA-205ENST00000546355 BAZ1BQ9UIG0 1483 aaKnown RBP39.35■■■■□ 3.89
RFLNA-205ENST00000546355 TRIM26Q12899 539 aaPredicted RBP39.3■■■■□ 3.88
RFLNA-205ENST00000546355 SOGA1O94964 1423 aa39.08■■■■□ 3.85
RFLNA-205ENST00000546355 WRNQ14191 1432 aaPredicted RBP eCLIP39.06■■■■□ 3.84
RFLNA-205ENST00000546355 EEA1Q15075 1411 aa38.9■■■■□ 3.82
RFLNA-205ENST00000546355 RUSC2Q8N2Y8 1516 aa38.9■■■■□ 3.82
RFLNA-205ENST00000546355 SYNJ1O43426 1573 aa38.87■■■■□ 3.81
RFLNA-205ENST00000546355 NCAPD3P42695 1498 aa38.84■■■■□ 3.81
RFLNA-205ENST00000546355 CSRNP3Q8WYN3 585 aa38.83■■■■□ 3.81
RFLNA-205ENST00000546355 HMGXB3Q12766 1538 aa38.82■■■■□ 3.8
RFLNA-205ENST00000546355 PPARGC1BQ86YN6 1023 aaKnown RBP38.66■■■■□ 3.78
RFLNA-205ENST00000546355 TNIKQ9UKE5 1360 aa38.65■■■■□ 3.78
RFLNA-205ENST00000546355 CEP162Q5TB80 1403 aa38.65■■■■□ 3.78
RFLNA-205ENST00000546355 UBTFP17480 764 aaKnown RBP38.6■■■■□ 3.77
RFLNA-205ENST00000546355 GOLGA3Q08378 1498 aa38.57■■■■□ 3.77
RFLNA-205ENST00000546355 TOP2BQ02880 1626 aa38.48■■■■□ 3.75
RFLNA-205ENST00000546355 CEP164Q9UPV0 1460 aa38.43■■■■□ 3.74
RFLNA-205ENST00000546355 KIF21BO75037 1637 aa38.37■■■■□ 3.73
RFLNA-205ENST00000546355 BIVM-ERCC5R4GMW8 1640 aa38.36■■■■□ 3.73
RFLNA-205ENST00000546355 CFTRP13569 1480 aa38.34■■■■□ 3.73
RFLNA-205ENST00000546355 CUX1P39880 1505 aa38.22■■■■□ 3.71
RFLNA-205ENST00000546355 TTBK1Q5TCY1 1321 aaPredicted RBP38.19■■■■□ 3.7
RFLNA-205ENST00000546355 ZEB1P37275 1124 aaPredicted RBP38.19■■■■□ 3.7
RFLNA-205ENST00000546355 RAPGEF2Q9Y4G8 1499 aa38.19■■■■□ 3.7
RFLNA-205ENST00000546355 CC2D2AQ9P2K1 1620 aa38.16■■■■□ 3.7
RFLNA-205ENST00000546355 CLIP1P30622 1438 aa38.08■■■■□ 3.69
RFLNA-205ENST00000546355 CADPSQ9ULU8 1353 aa38.03■■■■□ 3.68
RFLNA-205ENST00000546355 PRDM2Q13029 1718 aa38.02■■■■□ 3.68
RFLNA-205ENST00000546355 KIF27Q86VH2 1401 aa37.93■■■■□ 3.66
RFLNA-205ENST00000546355 PRXQ9BXM0 1461 aa37.93■■■■□ 3.66
RFLNA-205ENST00000546355 RANGAP1P46060 587 aaPredicted RBP37.92■■■■□ 3.66
RFLNA-205ENST00000546355 ERICH3Q5RHP9 1530 aa37.89■■■■□ 3.66
RFLNA-205ENST00000546355 VPS8Q8N3P4 1428 aa37.85■■■■□ 3.65
RFLNA-205ENST00000546355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.8■■■■□ 3.64
RFLNA-205ENST00000546355 CCER1Q8TC90 406 aaPredicted RBP37.71■■■■□ 3.63
RFLNA-205ENST00000546355 CUX2O14529 1486 aa37.67■■■■□ 3.62
RFLNA-205ENST00000546355 FANCD2Q9BXW9 1451 aa37.67■■■■□ 3.62
RFLNA-205ENST00000546355 FGD5Q6ZNL6 1462 aa37.65■■■■□ 3.62
RFLNA-205ENST00000546355 APLP2Q06481 763 aa37.64■■■■□ 3.62
RFLNA-205ENST00000546355 ARAP1Q96P48 1450 aa37.54■■■■□ 3.6
RFLNA-205ENST00000546355 NESP48681 1621 aa37.53■■■■□ 3.6
RFLNA-205ENST00000546355 IGF1RP08069 1367 aa37.52■■■■□ 3.6
RFLNA-205ENST00000546355 DNMBPQ6XZF7 1577 aa37.41■■■■□ 3.58
RFLNA-205ENST00000546355 CARMIL1Q5VZK9 1371 aa37.37■■■■□ 3.57
RFLNA-205ENST00000546355 TOPBP1Q92547 1522 aa37.35■■■■□ 3.57
RFLNA-205ENST00000546355 HNRNPUL2Q1KMD3 747 aaKnown RBP37.33■■■■□ 3.57
RFLNA-205ENST00000546355 ARHGAP35Q9NRY4 1499 aa37.32■■■■□ 3.56
RFLNA-205ENST00000546355 RAD54L2Q9Y4B4 1467 aa37.31■■■■□ 3.56
RFLNA-205ENST00000546355 LAMC3Q9Y6N6 1575 aa37.29■■■■□ 3.56
RFLNA-205ENST00000546355 POLA1P09884 1462 aaPredicted RBP37.29■■■■□ 3.56
RFLNA-205ENST00000546355 DNAJC5BQ9UF47 199 aa37.24■■■■□ 3.55
RFLNA-205ENST00000546355 ABCA10Q8WWZ4 1543 aa37.22■■■■□ 3.55
RFLNA-205ENST00000546355 KANK4Q5T7N3 995 aaPredicted RBP37.18■■■■□ 3.54
RFLNA-205ENST00000546355 URB2Q14146 1524 aaKnown RBP37.14■■■■□ 3.54
RFLNA-205ENST00000546355 PDS5BQ9NTI5 1447 aa37.07■■■■□ 3.53
RFLNA-205ENST00000546355 CUL7Q14999 1698 aa36.94■■■■□ 3.5
RFLNA-205ENST00000546355 WDR97A6NE52 1622 aa36.92■■■■□ 3.5
RFLNA-205ENST00000546355 KIF21AQ7Z4S6 1674 aa36.91■■■■□ 3.5
RFLNA-205ENST00000546355 TDRD9Q8NDG6 1382 aaKnown RBP36.88■■■■□ 3.49
RFLNA-205ENST00000546355 P3H3Q8IVL6 736 aa36.88■■■■□ 3.49
RFLNA-205ENST00000546355 RRBP1Q9P2E9 1410 aaKnown RBP36.86■■■■□ 3.49
RFLNA-205ENST00000546355 TIAM1Q13009 1591 aa36.82■■■■□ 3.48
RFLNA-205ENST00000546355 ABCA5Q8WWZ7 1642 aa36.81■■■■□ 3.48
RFLNA-205ENST00000546355 FHAD1B1AJZ9 1412 aa36.8■■■■□ 3.48
RFLNA-205ENST00000546355 GAPVD1Q14C86 1478 aa36.78■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms