Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 TCF25-224ENST00000570116 1947 ntTSL 512.74□□□□□ -0.372e-6■□□□□ 10
SUB1P53999 FIS1-204ENST00000449367 745 ntTSL 212.57□□□□□ -0.42e-6■□□□□ 10
SUB1P53999 BSDC1-214ENST00000530876 570 ntTSL 212.57□□□□□ -0.42e-6■□□□□ 10
SUB1P53999 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.532e-6■□□□□ 10
SUB1P53999 MRFAP1L1-202ENST00000500563 2127 nt11.56□□□□□ -0.562e-6■□□□□ 10
SUB1P53999 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC11.52□□□□□ -0.562e-6■□□□□ 10
SUB1P53999 FIS1-202ENST00000435848 692 ntTSL 511.46□□□□□ -0.572e-6■□□□□ 10
SUB1P53999 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.582e-6■□□□□ 10
SUB1P53999 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC11.36□□□□□ -0.592e-6■□□□□ 10
SUB1P53999 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC11.19□□□□□ -0.622e-6■□□□□ 10
SUB1P53999 BSDC1-210ENST00000527163 567 ntTSL 510.93□□□□□ -0.662e-6■□□□□ 10
SUB1P53999 BSDC1-211ENST00000527513 576 ntTSL 510.93□□□□□ -0.662e-6■□□□□ 10
SUB1P53999 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.712e-6■□□□□ 10
SUB1P53999 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.712e-6■□□□□ 10
SUB1P53999 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC10.25□□□□□ -0.772e-6■□□□□ 10
SUB1P53999 BSDC1-206ENST00000455895 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.852e-6■□□□□ 10
SUB1P53999 BSDC1-216ENST00000533084 564 ntTSL 39.71□□□□□ -0.862e-6■□□□□ 10
SUB1P53999 BSDC1-212ENST00000530485 482 ntTSL 59.7□□□□□ -0.862e-6■□□□□ 10
SUB1P53999 BSDC1-204ENST00000444377 2925 ntTSL 1 (best)8.44□□□□□ -1.062e-6■□□□□ 10
SUB1P53999 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.262e-6■□□□□ 10
SUB1P53999 CAST-244ENST00000515663 1473 ntTSL 2 BASIC7□□□□□ -1.292e-6■□□□□ 10
SUB1P53999 CAST-210ENST00000484552 1767 ntTSL 1 (best)6.64□□□□□ -1.352e-6■□□□□ 10
SUB1P53999 CAST-222ENST00000508579 1758 ntTSL 2 BASIC6.62□□□□□ -1.352e-6■□□□□ 10
SUB1P53999 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.372e-6■□□□□ 10
SUB1P53999 CAST-232ENST00000510500 1835 ntTSL 1 (best)6.18□□□□□ -1.422e-6■□□□□ 10
SUB1P53999 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.422e-6■□□□□ 10
SUB1P53999 MACF1-226ENST00000497964 4160 ntTSL 26.12□□□□□ -1.432e-6■□□□□ 10
SUB1P53999 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.432e-6■□□□□ 10
SUB1P53999 CAST-205ENST00000348386 2272 ntTSL 1 (best)6.02□□□□□ -1.442e-6■□□□□ 10
SUB1P53999 ADARB1-208ENST00000462214 587 ntTSL 35.84□□□□□ -1.472e-6■□□□□ 10
SUB1P53999 CAST-202ENST00000325674 3356 ntTSL 5 BASIC5.35□□□□□ -1.552e-6■□□□□ 10
SUB1P53999 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.562e-6■□□□□ 10
SUB1P53999 CAST-209ENST00000437034 3377 ntTSL 1 (best)4.41□□□□□ -1.72e-6■□□□□ 10
SUB1P53999 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.722e-6■□□□□ 10
SUB1P53999 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.792e-6■□□□□ 10
SUB1P53999 CAST-229ENST00000510098 1323 ntTSL 1 (best)2.86□□□□□ -1.952e-6■□□□□ 10
SUB1P53999 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.962e-6■□□□□ 10
SUB1P53999 CAST-226ENST00000509529 3066 ntTSL 21.74□□□□□ -2.132e-6■□□□□ 10
SUB1P53999 PPDPF-204ENST00000473620 478 ntTSL 214.32□□□□□ -0.125e-14■□□□□ 10
SUB1P53999 PPDPF-203ENST00000464438 373 ntTSL 214.27□□□□□ -0.135e-14■□□□□ 10
SUB1P53999 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC11.59□□□□□ -0.555e-14■□□□□ 10
SUB1P53999 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.685e-14■□□□□ 10
SUB1P53999 FASN-203ENST00000579410 424 ntTSL 27.26□□□□□ -1.255e-14■□□□□ 10
SUB1P53999 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC11.74□□□□□ -0.533e-9■□□□□ 10
SUB1P53999 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.37■□□□□ 0.211e-13■□□□□ 10
SUB1P53999 PMPCB-205ENST00000453466 1509 ntTSL 515.62■□□□□ 0.091e-13■□□□□ 10
SUB1P53999 PMPCB-204ENST00000444457 2385 ntTSL 214.99□□□□□ -0.011e-13■□□□□ 10
SUB1P53999 PMPCB-206ENST00000456433 904 ntTSL 513.19□□□□□ -0.31e-13■□□□□ 10
SUB1P53999 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.51e-13■□□□□ 10
SUB1P53999 PMPCB-203ENST00000443722 1323 ntTSL 59.82□□□□□ -0.841e-13■□□□□ 10
SUB1P53999 PMPCB-208ENST00000498530 1161 ntTSL 24.51□□□□□ -1.691e-13■□□□□ 10
SUB1P53999 RACK1-203ENST00000502844 1460 ntTSL 312.13□□□□□ -0.472e-55■□□□□ 10
SUB1P53999 RACK1-207ENST00000503170 461 ntTSL 411.98□□□□□ -0.492e-55■□□□□ 10
SUB1P53999 RACK1-230ENST00000513060 1651 ntTSL 510.71□□□□□ -0.692e-55■□□□□ 10
SUB1P53999 RACK1-229ENST00000513027 697 ntTSL 310.03□□□□□ -0.82e-55■□□□□ 10
SUB1P53999 RACK1-202ENST00000502548 1090 ntTSL 1 (best)9.85□□□□□ -0.832e-55■□□□□ 10
SUB1P53999 RACK1-223ENST00000510199 1100 ntTSL 39.38□□□□□ -0.912e-55■□□□□ 10
SUB1P53999 RACK1-226ENST00000511900 922 ntTSL 5 BASIC8.81□□□□□ -12e-55■□□□□ 10
SUB1P53999 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.132e-55■□□□□ 10
SUB1P53999 RACK1-205ENST00000502905 643 ntTSL 37.96□□□□□ -1.142e-55■□□□□ 10
SUB1P53999 RACK1-212ENST00000505461 1005 ntTSL 57.78□□□□□ -1.162e-55■□□□□ 10
SUB1P53999 RACK1-234ENST00000515417 873 ntTSL 37.35□□□□□ -1.232e-55■□□□□ 10
SUB1P53999 RACK1-210ENST00000504325 1098 ntTSL 1 (best)7.27□□□□□ -1.252e-55■□□□□ 10
SUB1P53999 RACK1-219ENST00000508682 1208 ntTSL 57.15□□□□□ -1.262e-55■□□□□ 10
SUB1P53999 RACK1-224ENST00000511473 1150 ntTSL 57.05□□□□□ -1.282e-55■□□□□ 10
SUB1P53999 RACK1-225ENST00000511566 825 ntTSL 3 BASIC7.05□□□□□ -1.282e-55■□□□□ 10
SUB1P53999 RACK1-217ENST00000507756 889 ntTSL 56.95□□□□□ -1.32e-55■□□□□ 10
SUB1P53999 RACK1-211ENST00000504726 388 ntTSL 5 BASIC6.81□□□□□ -1.322e-55■□□□□ 10
SUB1P53999 RACK1-228ENST00000512968 1058 ntTSL 56.75□□□□□ -1.332e-55■□□□□ 10
SUB1P53999 RACK1-215ENST00000507261 590 ntTSL 36.65□□□□□ -1.342e-55■□□□□ 10
SUB1P53999 RACK1-208ENST00000503494 843 ntTSL 36.32□□□□□ -1.42e-55■□□□□ 10
SUB1P53999 RACK1-201ENST00000376817 965 ntTSL 5 BASIC6.19□□□□□ -1.422e-55■□□□□ 10
SUB1P53999 RACK1-206ENST00000503081 587 ntTSL 35.59□□□□□ -1.512e-55■□□□□ 10
SUB1P53999 RACK1-231ENST00000514183 1439 ntTSL 25.25□□□□□ -1.572e-55■□□□□ 10
SUB1P53999 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.16□□□□□ -1.582e-55■□□□□ 10
SUB1P53999 RACK1-214ENST00000507000 685 ntTSL 55.11□□□□□ -1.592e-55■□□□□ 10
SUB1P53999 RACK1-213ENST00000506312 559 ntTSL 55.01□□□□□ -1.612e-55■□□□□ 10
SUB1P53999 RACK1-220ENST00000508963 581 ntTSL 24.87□□□□□ -1.632e-55■□□□□ 10
SUB1P53999 BAG6-260ENST00000465348 639 ntTSL 212.93□□□□□ -0.344e-8■□□□□ 10
SUB1P53999 BAG6-246ENST00000438149 714 ntTSL 312.16□□□□□ -0.464e-8■□□□□ 10
SUB1P53999 HBE1-203ENST00000396895 578 ntTSL 54.35□□□□□ -1.712e-9■□□□□ 10
SUB1P53999 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.26□□□□□ -0.131e-6■□□□□ 9.9
SUB1P53999 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.251e-6■□□□□ 9.9
SUB1P53999 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.8□□□□□ -0.521e-6■□□□□ 9.9
SUB1P53999 DRG1-202ENST00000416465 612 ntTSL 513.47□□□□□ -0.254e-8■□□□□ 9.9
SUB1P53999 DRG1-205ENST00000486584 318 ntTSL 59.92□□□□□ -0.824e-8■□□□□ 9.9
SUB1P53999 DRG1-203ENST00000433341 808 ntTSL 35.68□□□□□ -1.54e-8■□□□□ 9.9
SUB1P53999 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC10.94□□□□□ -0.662e-7■□□□□ 9.9
SUB1P53999 MRPS25-202ENST00000420267 590 ntTSL 49.48□□□□□ -0.892e-7■□□□□ 9.9
SUB1P53999 MRPS25-201ENST00000253686 4586 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.912e-7■□□□□ 9.9
SUB1P53999 MRPS25-205ENST00000449354 1119 ntTSL 2 BASIC7.2□□□□□ -1.262e-7■□□□□ 9.9
SUB1P53999 CHD4-203ENST00000535717 660 ntTSL 29.28□□□□□ -0.924e-8■□□□□ 9.9
SUB1P53999 TRIM28-215ENST00000601150 915 ntTSL 312.82□□□□□ -0.362e-13■□□□□ 9.9
SUB1P53999 TRIM28-212ENST00000597995 702 ntTSL 29.13□□□□□ -0.952e-13■□□□□ 9.9
SUB1P53999 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.021e-10■□□□□ 9.9
SUB1P53999 CTSD-204ENST00000433655 2006 ntTSL 513.63□□□□□ -0.231e-10■□□□□ 9.9
SUB1P53999 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.281e-10■□□□□ 9.9
SUB1P53999 CTSD-209ENST00000637158 1200 ntTSL 513.27□□□□□ -0.291e-10■□□□□ 9.9
SUB1P53999 CTSD-214ENST00000637937 1262 ntTSL 512.71□□□□□ -0.371e-10■□□□□ 9.9
SUB1P53999 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.41e-10■□□□□ 9.9
Retrieved 100 of 11,644 protein–RNA pairs in 206.9 ms