RNA–Protein interactions for RNA: ENST00000508579.5

CAST-222, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-222ENST00000508579 AEBP2Q6ZN18 517 aaPredicted RBP18.72■□□□□ 0.59
CAST-222ENST00000508579 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
CAST-222ENST00000508579 SENP3Q9H4L4 574 aaPredicted RBP16.26■□□□□ 0.19
CAST-222ENST00000508579 POTEDQ86YR6 584 aa15.92■□□□□ 0.14
CAST-222ENST00000508579 PHF23Q9BUL5 403 aaPredicted RBP15.85■□□□□ 0.13
CAST-222ENST00000508579 MYT1Q01538 1121 aa15.81■□□□□ 0.12
CAST-222ENST00000508579 PELP1Q8IZL8 1130 aaKnown RBP15.66■□□□□ 0.1
CAST-222ENST00000508579 SLC24A1O60721 1099 aa15.63■□□□□ 0.09
CAST-222ENST00000508579 TTBK1Q5TCY1 1321 aaPredicted RBP15.51■□□□□ 0.07
CAST-222ENST00000508579 FOXD1Q16676 465 aa15.19■□□□□ 0.02
CAST-222ENST00000508579 ERICH6Q7L0X2 663 aa14.81□□□□□ -0.04
CAST-222ENST00000508579 DAXXQ9UER7 740 aaPredicted RBP14.72□□□□□ -0.05
CAST-222ENST00000508579 MSH5O43196 834 aa14.7□□□□□ -0.06
CAST-222ENST00000508579 APLP2Q06481 763 aa14.69□□□□□ -0.06
CAST-222ENST00000508579 PRKCSHP14314 528 aaPredicted RBP14.61□□□□□ -0.07
CAST-222ENST00000508579 PIAS4Q8N2W9 510 aaPredicted RBP13.98□□□□□ -0.17
CAST-222ENST00000508579 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
CAST-222ENST00000508579 PLPPR3Q6T4P5 718 aa13.83□□□□□ -0.19
CAST-222ENST00000508579 EIF5BO60841 1220 aaKnown RBP13.78□□□□□ -0.2
CAST-222ENST00000508579 BCL11AQ9H165 835 aa13.74□□□□□ -0.21
CAST-222ENST00000508579 PPP6R1Q9UPN7 881 aa13.71□□□□□ -0.22
CAST-222ENST00000508579 ARXQ96QS3 562 aa13.68□□□□□ -0.22
CAST-222ENST00000508579 ADRA2BP18089 450 aa13.64□□□□□ -0.23
CAST-222ENST00000508579 RANGAP1P46060 587 aaPredicted RBP13.59□□□□□ -0.23
CAST-222ENST00000508579 RTN4Q9NQC3 1192 aaKnown RBP13.43□□□□□ -0.26
CAST-222ENST00000508579 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
CAST-222ENST00000508579 FAM9AQ8IZU1 332 aaPredicted RBP13.4□□□□□ -0.26
CAST-222ENST00000508579 AMER1Q5JTC6 1135 aaPredicted RBP13.27□□□□□ -0.28
CAST-222ENST00000508579 HOMEZQ8IX15 550 aa13.18□□□□□ -0.3
CAST-222ENST00000508579 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
CAST-222ENST00000508579 CENPBP07199 599 aaPredicted RBP13.16□□□□□ -0.3
CAST-222ENST00000508579 TIMELESSQ9UNS1 1208 aa13.16□□□□□ -0.3
CAST-222ENST00000508579 PLEKHG5O94827 1062 aa13.09□□□□□ -0.31
CAST-222ENST00000508579 UBE2Q2Q8WVN8 375 aa13.09□□□□□ -0.31
CAST-222ENST00000508579 KLHL34Q8N239 644 aa13.07□□□□□ -0.32
CAST-222ENST00000508579 PODXL2Q9NZ53 605 aa13.06□□□□□ -0.32
CAST-222ENST00000508579 HRCP23327 699 aa13.04□□□□□ -0.32
CAST-222ENST00000508579 SCAF1Q9H7N4 1312 aaKnown RBP13.02□□□□□ -0.32
CAST-222ENST00000508579 TULP1O00294 542 aaPredicted RBP12.95□□□□□ -0.34
CAST-222ENST00000508579 NEFLP07196 543 aa12.78□□□□□ -0.36
CAST-222ENST00000508579 NISCHQ9Y2I1 1504 aa12.77□□□□□ -0.37
CAST-222ENST00000508579 PDIA4P13667 645 aaKnown RBP12.76□□□□□ -0.37
CAST-222ENST00000508579 TAOK2Q9UL54 1235 aa12.76□□□□□ -0.37
CAST-222ENST00000508579 ANP32EQ9BTT0 268 aa12.75□□□□□ -0.37
CAST-222ENST00000508579 PKNOX2Q96KN3 472 aa12.74□□□□□ -0.37
CAST-222ENST00000508579 NPM2Q86SE8 214 aaKnown RBP12.71□□□□□ -0.38
CAST-222ENST00000508579 DMRT2Q9Y5R5 561 aa12.71□□□□□ -0.38
CAST-222ENST00000508579 FBXO3Q9UK99 471 aa12.63□□□□□ -0.39
CAST-222ENST00000508579 PDE4CQ08493 712 aa12.62□□□□□ -0.39
CAST-222ENST00000508579 KCNA4P22459 653 aa12.61□□□□□ -0.39
CAST-222ENST00000508579 MAPK8IP2Q13387 824 aaPredicted RBP12.61□□□□□ -0.39
CAST-222ENST00000508579 BCANQ96GW7 911 aa12.61□□□□□ -0.39
CAST-222ENST00000508579 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
CAST-222ENST00000508579 TAF7LQ5H9L4 462 aa12.53□□□□□ -0.4
CAST-222ENST00000508579 GTF3C3Q9Y5Q9 886 aa12.53□□□□□ -0.4
CAST-222ENST00000508579 TPRNQ4KMQ1 711 aa12.51□□□□□ -0.41
CAST-222ENST00000508579 C14orf37Q86TY3 774 aa12.51□□□□□ -0.41
CAST-222ENST00000508579 ANO8Q9HCE9 1232 aaPredicted RBP12.48□□□□□ -0.41
CAST-222ENST00000508579 ERICH6BQ5W0A0 696 aa12.47□□□□□ -0.41
CAST-222ENST00000508579 ACIN1Q9UKV3 1341 aaKnown RBP12.43□□□□□ -0.42
CAST-222ENST00000508579 CDK11AQ9UQ88 783 aaPredicted RBP12.41□□□□□ -0.42
CAST-222ENST00000508579 BRD2P25440 801 aaKnown RBP12.41□□□□□ -0.42
CAST-222ENST00000508579 CSRNP3Q8WYN3 585 aa12.39□□□□□ -0.43
CAST-222ENST00000508579 RNF39Q9H2S5 420 aa12.39□□□□□ -0.43
CAST-222ENST00000508579 FGD1P98174 961 aa12.37□□□□□ -0.43
CAST-222ENST00000508579 MYT1LQ9UL68 1186 aa12.35□□□□□ -0.43
CAST-222ENST00000508579 CHMP4AQ9BY43 222 aa12.33□□□□□ -0.44
CAST-222ENST00000508579 POTEHQ6S545 545 aa12.3□□□□□ -0.44
CAST-222ENST00000508579 ZNF326Q5BKZ1 582 aaKnown RBP12.3□□□□□ -0.44
CAST-222ENST00000508579 CNKSR2Q8WXI2 1034 aa12.28□□□□□ -0.44
CAST-222ENST00000508579 CDK11BP21127 795 aaKnown RBP12.26□□□□□ -0.45
CAST-222ENST00000508579 LOC105371045A0A1W2PR82 267 aa12.25□□□□□ -0.45
CAST-222ENST00000508579 BCL11BQ9C0K0 894 aaPredicted RBP12.25□□□□□ -0.45
CAST-222ENST00000508579 CLSPNQ9HAW4 1339 aa12.23□□□□□ -0.45
CAST-222ENST00000508579 DCAF8L1A6NGE4 600 aa12.21□□□□□ -0.45
CAST-222ENST00000508579 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
CAST-222ENST00000508579 TMEM132AQ24JP5 1023 aa12.21□□□□□ -0.45
CAST-222ENST00000508579 SAMD1Q6SPF0 538 aaPredicted RBP12.21□□□□□ -0.45
CAST-222ENST00000508579 HSP90B1P14625 803 aaKnown RBP12.2□□□□□ -0.46
CAST-222ENST00000508579 HAP1P54257 671 aaPredicted RBP12.2□□□□□ -0.46
CAST-222ENST00000508579 GLIPR1L2Q4G1C9 344 aa12.2□□□□□ -0.46
CAST-222ENST00000508579 ZEB1P37275 1124 aaPredicted RBP12.19□□□□□ -0.46
CAST-222ENST00000508579 RSPH4AQ5TD94 716 aa12.16□□□□□ -0.46
CAST-222ENST00000508579 TRIM26Q12899 539 aaPredicted RBP12.15□□□□□ -0.46
CAST-222ENST00000508579 HMGB1P09429 215 aaKnown RBP12.15□□□□□ -0.46
CAST-222ENST00000508579 PLCB2Q00722 1185 aa12.13□□□□□ -0.47
CAST-222ENST00000508579 AAMPQ13685 434 aa12.13□□□□□ -0.47
CAST-222ENST00000508579 DHX37Q8IY37 1157 aaKnown RBP12.13□□□□□ -0.47
CAST-222ENST00000508579 PPARGC1BQ86YN6 1023 aaKnown RBP12.12□□□□□ -0.47
CAST-222ENST00000508579 BCCIPQ9P287 314 aaKnown RBP eCLIP12.12□□□□□ -0.47
CAST-222ENST00000508579 RSPH6AQ9H0K4 717 aa12.11□□□□□ -0.47
CAST-222ENST00000508579 SALL2Q9Y467 1007 aaPredicted RBP12.11□□□□□ -0.47
CAST-222ENST00000508579 HOXD11P31277 338 aaPredicted RBP12.07□□□□□ -0.48
CAST-222ENST00000508579 NEUROD1Q13562 356 aa12.06□□□□□ -0.48
CAST-222ENST00000508579 PPP4R3CPQ6ZMV5 832 aa12.06□□□□□ -0.48
CAST-222ENST00000508579 SHROOM4Q9ULL8 1493 aa12.02□□□□□ -0.49
CAST-222ENST00000508579 NAP1L5Q96NT1 182 aaPredicted RBP11.98□□□□□ -0.49
CAST-222ENST00000508579 RBM10P98175 930 aaKnown RBP11.96□□□□□ -0.49
CAST-222ENST00000508579 A0A0U1RQG5 324 aaPredicted RBP11.93□□□□□ -0.5
CAST-222ENST00000508579 CCDC136Q96JN2 1154 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms