RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 NISCHQ9Y2I1 1504 aa29.3■■■□□ 2.28
PMPCB-201ENST00000249269 SLC24A1O60721 1099 aa27.7■■■□□ 2.03
PMPCB-201ENST00000249269 MYT1Q01538 1121 aa26.84■■□□□ 1.89
PMPCB-201ENST00000249269 PELP1Q8IZL8 1130 aaKnown RBP26.71■■□□□ 1.87
PMPCB-201ENST00000249269 TTBK1Q5TCY1 1321 aaPredicted RBP26.39■■□□□ 1.81
PMPCB-201ENST00000249269 PRKCSHP14314 528 aaPredicted RBP26.09■■□□□ 1.77
PMPCB-201ENST00000249269 DAXXQ9UER7 740 aaPredicted RBP25.8■■□□□ 1.72
PMPCB-201ENST00000249269 APLP2Q06481 763 aa25.78■■□□□ 1.72
PMPCB-201ENST00000249269 ERICH6Q7L0X2 663 aa25.6■■□□□ 1.69
PMPCB-201ENST00000249269 CCDC180Q9P1Z9 1646 aa24.98■■□□□ 1.59
PMPCB-201ENST00000249269 ZCCHC6Q5VYS8 1495 aaKnown RBP24.92■■□□□ 1.58
PMPCB-201ENST00000249269 SHROOM4Q9ULL8 1493 aa24.62■■□□□ 1.53
PMPCB-201ENST00000249269 NCBP3Q53F19 620 aaKnown RBP24.54■■□□□ 1.52
PMPCB-201ENST00000249269 SUPT5HO00267 1087 aaKnown RBP24.44■■□□□ 1.5
PMPCB-201ENST00000249269 DCAF1Q9Y4B6 1507 aa24.39■■□□□ 1.5
PMPCB-201ENST00000249269 HRCP23327 699 aa24.38■■□□□ 1.49
PMPCB-201ENST00000249269 PLPPR3Q6T4P5 718 aa24.33■■□□□ 1.48
PMPCB-201ENST00000249269 EHMT2Q96KQ7 1210 aa24.27■■□□□ 1.48
PMPCB-201ENST00000249269 EIF5BO60841 1220 aaKnown RBP24.27■■□□□ 1.48
PMPCB-201ENST00000249269 CHIC1Q5VXU3 224 aa24.27■■□□□ 1.48
PMPCB-201ENST00000249269 RTN4Q9NQC3 1192 aaKnown RBP24.19■■□□□ 1.46
PMPCB-201ENST00000249269 BCL11AQ9H165 835 aa24.18■■□□□ 1.46
PMPCB-201ENST00000249269 MYO15BQ96JP2 1530 aa24.14■■□□□ 1.45
PMPCB-201ENST00000249269 ARXQ96QS3 562 aa23.84■■□□□ 1.41
PMPCB-201ENST00000249269 PCGF6Q9BYE7 350 aa23.75■■□□□ 1.39
PMPCB-201ENST00000249269 FAM9AQ8IZU1 332 aaPredicted RBP23.74■■□□□ 1.39
PMPCB-201ENST00000249269 PLEKHG5O94827 1062 aa23.67■■□□□ 1.38
PMPCB-201ENST00000249269 TIMELESSQ9UNS1 1208 aa23.64■■□□□ 1.37
PMPCB-201ENST00000249269 ABCC9O60706 1549 aa23.6■■□□□ 1.37
PMPCB-201ENST00000249269 TRIM26Q12899 539 aaPredicted RBP23.57■■□□□ 1.36
PMPCB-201ENST00000249269 RANGAP1P46060 587 aaPredicted RBP23.54■■□□□ 1.36
PMPCB-201ENST00000249269 ZEB1P37275 1124 aaPredicted RBP23.53■■□□□ 1.36
PMPCB-201ENST00000249269 KLHL34Q8N239 644 aa23.5■■□□□ 1.35
PMPCB-201ENST00000249269 DCAF8L2P0C7V8 631 aa23.47■■□□□ 1.35
PMPCB-201ENST00000249269 PPARGC1BQ86YN6 1023 aaKnown RBP23.27■■□□□ 1.32
PMPCB-201ENST00000249269 LOC105371045A0A1W2PR82 267 aa23.25■■□□□ 1.31
PMPCB-201ENST00000249269 RB1CC1Q8TDY2 1594 aa23.25■■□□□ 1.31
PMPCB-201ENST00000249269 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
PMPCB-201ENST00000249269 AMER1Q5JTC6 1135 aaPredicted RBP23.24■■□□□ 1.31
PMPCB-201ENST00000249269 TULP1O00294 542 aaPredicted RBP23.16■■□□□ 1.3
PMPCB-201ENST00000249269 PODXL2Q9NZ53 605 aa23.07■■□□□ 1.28
PMPCB-201ENST00000249269 HOMEZQ8IX15 550 aa23.03■■□□□ 1.28
PMPCB-201ENST00000249269 TRIM41Q8WV44 630 aa23■■□□□ 1.27
PMPCB-201ENST00000249269 SCRIBQ14160 1630 aa22.97■■□□□ 1.27
PMPCB-201ENST00000249269 NACADO15069 1562 aa22.92■■□□□ 1.26
PMPCB-201ENST00000249269 UBE2Q2Q8WVN8 375 aa22.79■■□□□ 1.24
PMPCB-201ENST00000249269 KCNA4P22459 653 aa22.76■■□□□ 1.23
PMPCB-201ENST00000249269 SCAF1Q9H7N4 1312 aaKnown RBP22.71■■□□□ 1.23
PMPCB-201ENST00000249269 TAOK2Q9UL54 1235 aa22.7■■□□□ 1.22
PMPCB-201ENST00000249269 BAZ1AQ9NRL2 1556 aaPredicted RBP22.67■■□□□ 1.22
PMPCB-201ENST00000249269 EIF4G1Q04637 1599 aaKnown RBP22.63■■□□□ 1.21
PMPCB-201ENST00000249269 MROH2BQ7Z745 1585 aa22.61■■□□□ 1.21
PMPCB-201ENST00000249269 WRNQ14191 1432 aaPredicted RBP eCLIP22.59■■□□□ 1.21
PMPCB-201ENST00000249269 CECR2Q9BXF3 1484 aa22.53■■□□□ 1.2
PMPCB-201ENST00000249269 CENPBP07199 599 aaPredicted RBP22.51■■□□□ 1.19
PMPCB-201ENST00000249269 PDIA4P13667 645 aaKnown RBP22.51■■□□□ 1.19
PMPCB-201ENST00000249269 AEBP2Q6ZN18 517 aaPredicted RBP22.49■■□□□ 1.19
PMPCB-201ENST00000249269 WIZO95785 1651 aa22.48■■□□□ 1.19
PMPCB-201ENST00000249269 EEA1Q15075 1411 aa22.45■■□□□ 1.18
PMPCB-201ENST00000249269 NPM2Q86SE8 214 aaKnown RBP22.43■■□□□ 1.18
PMPCB-201ENST00000249269 TOP2AP11388 1531 aaKnown RBP22.41■■□□□ 1.18
PMPCB-201ENST00000249269 ACIN1Q9UKV3 1341 aaKnown RBP22.37■■□□□ 1.17
PMPCB-201ENST00000249269 TPRNQ4KMQ1 711 aa22.34■■□□□ 1.17
PMPCB-201ENST00000249269 PKNOX2Q96KN3 472 aa22.34■■□□□ 1.17
PMPCB-201ENST00000249269 TNIKQ9UKE5 1360 aa22.31■■□□□ 1.16
PMPCB-201ENST00000249269 CCER1Q8TC90 406 aaPredicted RBP22.31■■□□□ 1.16
PMPCB-201ENST00000249269 PDE4CQ08493 712 aa22.23■■□□□ 1.15
PMPCB-201ENST00000249269 CSRNP3Q8WYN3 585 aa22.21■■□□□ 1.15
PMPCB-201ENST00000249269 SMARCA4P51532 1647 aa22.21■■□□□ 1.15
PMPCB-201ENST00000249269 CEP162Q5TB80 1403 aa22.2■■□□□ 1.14
PMPCB-201ENST00000249269 C14orf37Q86TY3 774 aa22.19■■□□□ 1.14
PMPCB-201ENST00000249269 SMARCA2P51531 1590 aa22.19■■□□□ 1.14
PMPCB-201ENST00000249269 DIEXFQ68CQ4 756 aaKnown RBP22.18■■□□□ 1.14
PMPCB-201ENST00000249269 GTF3C3Q9Y5Q9 886 aa22.16■■□□□ 1.14
PMPCB-201ENST00000249269 ANO8Q9HCE9 1232 aaPredicted RBP22.16■■□□□ 1.14
PMPCB-201ENST00000249269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.14■■□□□ 1.13
PMPCB-201ENST00000249269 CCDC88BA6NC98 1476 aa22.14■■□□□ 1.13
PMPCB-201ENST00000249269 BCANQ96GW7 911 aa22.12■■□□□ 1.13
PMPCB-201ENST00000249269 NEFLP07196 543 aa22.11■■□□□ 1.13
PMPCB-201ENST00000249269 GOLGA3Q08378 1498 aa22.08■■□□□ 1.13
PMPCB-201ENST00000249269 NEUROD1Q13562 356 aa22.08■■□□□ 1.13
PMPCB-201ENST00000249269 ABCC8Q09428 1581 aa22.03■■□□□ 1.12
PMPCB-201ENST00000249269 ZNF316A6NFI3 1004 aaPredicted RBP22.01■■□□□ 1.11
PMPCB-201ENST00000249269 KIF21BO75037 1637 aa22■■□□□ 1.11
PMPCB-201ENST00000249269 PEG3Q9GZU2 1588 aa21.99■■□□□ 1.11
PMPCB-201ENST00000249269 ANP32EQ9BTT0 268 aa21.97■■□□□ 1.11
PMPCB-201ENST00000249269 CHMP4AQ9BY43 222 aa21.96■■□□□ 1.11
PMPCB-201ENST00000249269 CEP164Q9UPV0 1460 aa21.94■■□□□ 1.1
PMPCB-201ENST00000249269 SOGA1O94964 1423 aa21.94■■□□□ 1.1
PMPCB-201ENST00000249269 BAZ1BQ9UIG0 1483 aaKnown RBP21.93■■□□□ 1.1
PMPCB-201ENST00000249269 HAP1P54257 671 aaPredicted RBP21.89■■□□□ 1.09
PMPCB-201ENST00000249269 FBXO3Q9UK99 471 aa21.87■■□□□ 1.09
PMPCB-201ENST00000249269 CLSPNQ9HAW4 1339 aa21.86■■□□□ 1.09
PMPCB-201ENST00000249269 UNC13AQ9UPW8 1703 aa21.85■■□□□ 1.09
PMPCB-201ENST00000249269 TAF7LQ5H9L4 462 aa21.85■■□□□ 1.09
PMPCB-201ENST00000249269 BCL11BQ9C0K0 894 aaPredicted RBP21.81■■□□□ 1.08
PMPCB-201ENST00000249269 DHX37Q8IY37 1157 aaKnown RBP21.8■■□□□ 1.08
PMPCB-201ENST00000249269 VPS8Q8N3P4 1428 aa21.78■■□□□ 1.08
PMPCB-201ENST00000249269 UBTFP17480 764 aaKnown RBP21.77■■□□□ 1.07
PMPCB-201ENST00000249269 SAMD1Q6SPF0 538 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms