RNA–Protein interactions for RNA: ENST00000511566.5

RACK1-225, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3 BASIC

Gene RACK1, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-225ENST00000511566 NISCHQ9Y2I1 1504 aa24.95■■□□□ 1.58
RACK1-225ENST00000511566 CCDC180Q9P1Z9 1646 aa22.5■■□□□ 1.19
RACK1-225ENST00000511566 ABCC9O60706 1549 aa22.36■■□□□ 1.17
RACK1-225ENST00000511566 RB1CC1Q8TDY2 1594 aa21.33■■□□□ 1.01
RACK1-225ENST00000511566 NACADO15069 1562 aa21.19■□□□□ 0.98
RACK1-225ENST00000511566 UNC13AQ9UPW8 1703 aa20.98■□□□□ 0.95
RACK1-225ENST00000511566 MYO15BQ96JP2 1530 aa20.92■□□□□ 0.94
RACK1-225ENST00000511566 DNAJC5BQ9UF47 199 aa20.9■□□□□ 0.94
RACK1-225ENST00000511566 BICRAQ9NZM4 1560 aa20.77■□□□□ 0.92
RACK1-225ENST00000511566 DCAF8L2P0C7V8 631 aa20.76■□□□□ 0.91
RACK1-225ENST00000511566 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
RACK1-225ENST00000511566 PABPN1Q86U42 306 aaKnown RBP eCLIP20.7■□□□□ 0.9
RACK1-225ENST00000511566 DCAF1Q9Y4B6 1507 aa20.66■□□□□ 0.9
RACK1-225ENST00000511566 SHROOM4Q9ULL8 1493 aa20.5■□□□□ 0.87
RACK1-225ENST00000511566 SCRIBQ14160 1630 aa20.44■□□□□ 0.86
RACK1-225ENST00000511566 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.83
RACK1-225ENST00000511566 EIF4G1Q04637 1599 aaKnown RBP20.23■□□□□ 0.83
RACK1-225ENST00000511566 CECR2Q9BXF3 1484 aa20.14■□□□□ 0.81
RACK1-225ENST00000511566 SMARCA4P51532 1647 aa19.52■□□□□ 0.72
RACK1-225ENST00000511566 NCAPD3P42695 1498 aa19.52■□□□□ 0.72
RACK1-225ENST00000511566 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
RACK1-225ENST00000511566 HMGXB3Q12766 1538 aa19.46■□□□□ 0.71
RACK1-225ENST00000511566 SMARCA2P51531 1590 aa19.44■□□□□ 0.7
RACK1-225ENST00000511566 BAZ1AQ9NRL2 1556 aaPredicted RBP19.37■□□□□ 0.69
RACK1-225ENST00000511566 PEG3Q9GZU2 1588 aa19.35■□□□□ 0.69
RACK1-225ENST00000511566 CUX2O14529 1486 aa19.31■□□□□ 0.68
RACK1-225ENST00000511566 ERCC6Q03468 1493 aa19.28■□□□□ 0.68
RACK1-225ENST00000511566 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
RACK1-225ENST00000511566 NESP48681 1621 aa19.23■□□□□ 0.67
RACK1-225ENST00000511566 MROH2BQ7Z745 1585 aa19.23■□□□□ 0.67
RACK1-225ENST00000511566 THOC2Q8NI27 1593 aaKnown RBP19.16■□□□□ 0.66
RACK1-225ENST00000511566 DNAJC5Q9H3Z4 198 aa19.16■□□□□ 0.66
RACK1-225ENST00000511566 LAMC3Q9Y6N6 1575 aa19.13■□□□□ 0.65
RACK1-225ENST00000511566 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.64
RACK1-225ENST00000511566 WIZO95785 1651 aa19.02■□□□□ 0.64
RACK1-225ENST00000511566 PDS5BQ9NTI5 1447 aa18.91■□□□□ 0.62
RACK1-225ENST00000511566 CADPSQ9ULU8 1353 aa18.88■□□□□ 0.61
RACK1-225ENST00000511566 WDR62O43379 1518 aa18.85■□□□□ 0.61
RACK1-225ENST00000511566 MRC2Q9UBG0 1479 aa18.84■□□□□ 0.61
RACK1-225ENST00000511566 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
RACK1-225ENST00000511566 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
RACK1-225ENST00000511566 CEP164Q9UPV0 1460 aa18.75■□□□□ 0.59
RACK1-225ENST00000511566 CFTRP13569 1480 aa18.72■□□□□ 0.59
RACK1-225ENST00000511566 FANCD2Q9BXW9 1451 aa18.71■□□□□ 0.59
RACK1-225ENST00000511566 PRDM2Q13029 1718 aa18.7■□□□□ 0.58
RACK1-225ENST00000511566 URB2Q14146 1524 aaKnown RBP18.6■□□□□ 0.57
RACK1-225ENST00000511566 CCDC88BA6NC98 1476 aa18.5■□□□□ 0.55
RACK1-225ENST00000511566 TOPBP1Q92547 1522 aa18.39■□□□□ 0.54
RACK1-225ENST00000511566 IFT140Q96RY7 1462 aa18.36■□□□□ 0.53
RACK1-225ENST00000511566 DNMBPQ6XZF7 1577 aa18.35■□□□□ 0.53
RACK1-225ENST00000511566 ZNF608Q9ULD9 1512 aaPredicted RBP18.35■□□□□ 0.53
RACK1-225ENST00000511566 EIF4G3O43432 1585 aaKnown RBP18.33■□□□□ 0.52
RACK1-225ENST00000511566 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
RACK1-225ENST00000511566 ABCC8Q09428 1581 aa18.28■□□□□ 0.52
RACK1-225ENST00000511566 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.52
RACK1-225ENST00000511566 OSCARQ8IYS5 282 aa18.23■□□□□ 0.51
RACK1-225ENST00000511566 RIMBP3CA6NJZ7 1639 aa18.23■□□□□ 0.51
RACK1-225ENST00000511566 RIMBP3BA6NNM3 1639 aa18.23■□□□□ 0.51
RACK1-225ENST00000511566 RIMBP3Q9UFD9 1639 aa18.23■□□□□ 0.51
RACK1-225ENST00000511566 CHD1O14646 1710 aa18.2■□□□□ 0.5
RACK1-225ENST00000511566 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
RACK1-225ENST00000511566 ARHGEF11O15085 1522 aa18.15■□□□□ 0.5
RACK1-225ENST00000511566 AQRO60306 1485 aaKnown RBP eCLIP18.12■□□□□ 0.493e-10■■■■■ 58.2
RACK1-225ENST00000511566 WDR97A6NE52 1622 aa18.1■□□□□ 0.49
RACK1-225ENST00000511566 CUX1P39880 1505 aa18.09■□□□□ 0.49
RACK1-225ENST00000511566 RAD54L2Q9Y4B4 1467 aa18.09■□□□□ 0.49
RACK1-225ENST00000511566 FGD5Q6ZNL6 1462 aa18.07■□□□□ 0.48
RACK1-225ENST00000511566 SOGA1O94964 1423 aa18.01■□□□□ 0.47
RACK1-225ENST00000511566 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
RACK1-225ENST00000511566 CLASP1Q7Z460 1538 aa17.98■□□□□ 0.47
RACK1-225ENST00000511566 ARAP1Q96P48 1450 aa17.98■□□□□ 0.47
RACK1-225ENST00000511566 PBRM1Q86U86 1689 aa17.98■□□□□ 0.47
RACK1-225ENST00000511566 TDRD9Q8NDG6 1382 aaKnown RBP17.97■□□□□ 0.47
RACK1-225ENST00000511566 MAGI1Q96QZ7 1491 aaPredicted RBP17.95■□□□□ 0.46
RACK1-225ENST00000511566 ABCA5Q8WWZ7 1642 aa17.94■□□□□ 0.46
RACK1-225ENST00000511566 GRIN2BQ13224 1484 aa17.92■□□□□ 0.46
RACK1-225ENST00000511566 SYNJ1O43426 1573 aa17.91■□□□□ 0.46
RACK1-225ENST00000511566 ABCA10Q8WWZ4 1543 aa17.88■□□□□ 0.45
RACK1-225ENST00000511566 SYNJ2O15056 1496 aa17.88■□□□□ 0.45
RACK1-225ENST00000511566 FBLN2P98095 1184 aa17.86■□□□□ 0.45
RACK1-225ENST00000511566 GAPVD1Q14C86 1478 aa17.85■□□□□ 0.45
RACK1-225ENST00000511566 BIVM-ERCC5R4GMW8 1640 aa17.85■□□□□ 0.45
RACK1-225ENST00000511566 CYB5RLQ6IPT4 315 aa17.81■□□□□ 0.44
RACK1-225ENST00000511566 ADAMTS12P58397 1594 aa17.81■□□□□ 0.44
RACK1-225ENST00000511566 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
RACK1-225ENST00000511566 SUPT5HO00267 1087 aaKnown RBP17.76■□□□□ 0.43
RACK1-225ENST00000511566 CHMP7Q8WUX9 453 aaPredicted RBP17.75■□□□□ 0.43
RACK1-225ENST00000511566 GRIN2AQ12879 1464 aa17.73■□□□□ 0.43
RACK1-225ENST00000511566 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
RACK1-225ENST00000511566 CEP170Q5SW79 1584 aa17.71■□□□□ 0.43
RACK1-225ENST00000511566 NUP160Q12769 1436 aa17.68■□□□□ 0.42
RACK1-225ENST00000511566 ERCC6L2Q5T890 1561 aa17.67■□□□□ 0.42
RACK1-225ENST00000511566 SHROOM2Q13796 1616 aa17.67■□□□□ 0.42
RACK1-225ENST00000511566 ERICH3Q5RHP9 1530 aa17.66■□□□□ 0.42
RACK1-225ENST00000511566 FHAD1B1AJZ9 1412 aa17.62■□□□□ 0.41
RACK1-225ENST00000511566 TRHP20396 242 aaPredicted RBP17.57■□□□□ 0.4
RACK1-225ENST00000511566 RUSC2Q8N2Y8 1516 aa17.56■□□□□ 0.4
RACK1-225ENST00000511566 CUL7Q14999 1698 aa17.44■□□□□ 0.38
RACK1-225ENST00000511566 KIF13AQ9H1H9 1805 aa17.44■□□□□ 0.38
RACK1-225ENST00000511566 PRG4Q92954 1404 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms