RNA–Protein interactions for RNA: ENST00000497964.1

MACF1-226, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 4,160 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-226ENST00000497964 NISCHQ9Y2I1 1504 aa12.63□□□□□ -0.39
MACF1-226ENST00000497964 DCAF8L2P0C7V8 631 aa12.22□□□□□ -0.45
MACF1-226ENST00000497964 SUPT5HO00267 1087 aaKnown RBP12.2□□□□□ -0.46
MACF1-226ENST00000497964 SHROOM4Q9ULL8 1493 aa12.07□□□□□ -0.48
MACF1-226ENST00000497964 PCGF6Q9BYE7 350 aa11.75□□□□□ -0.53
MACF1-226ENST00000497964 EHMT2Q96KQ7 1210 aa11.65□□□□□ -0.54
MACF1-226ENST00000497964 HRCP23327 699 aa11.44□□□□□ -0.58
MACF1-226ENST00000497964 FAM9AQ8IZU1 332 aaPredicted RBP11.44□□□□□ -0.58
MACF1-226ENST00000497964 PPARGC1BQ86YN6 1023 aaKnown RBP11.37□□□□□ -0.59
MACF1-226ENST00000497964 CHIC1Q5VXU3 224 aa11.29□□□□□ -0.6
MACF1-226ENST00000497964 TTBK1Q5TCY1 1321 aaPredicted RBP11.29□□□□□ -0.6
MACF1-226ENST00000497964 LOC105371045A0A1W2PR82 267 aa11.28□□□□□ -0.6
MACF1-226ENST00000497964 TRIM41Q8WV44 630 aa11.19□□□□□ -0.62
MACF1-226ENST00000497964 ZEB1P37275 1124 aaPredicted RBP11.19□□□□□ -0.62
MACF1-226ENST00000497964 TRIM26Q12899 539 aaPredicted RBP11.17□□□□□ -0.62
MACF1-226ENST00000497964 CCER1Q8TC90 406 aaPredicted RBP11.14□□□□□ -0.63
MACF1-226ENST00000497964 PELP1Q8IZL8 1130 aaKnown RBP11.13□□□□□ -0.63
MACF1-226ENST00000497964 CENPBP07199 599 aaPredicted RBP11.07□□□□□ -0.64
MACF1-226ENST00000497964 YTHDC1Q96MU7 727 aaKnown RBP11.02□□□□□ -0.65
MACF1-226ENST00000497964 APLP2Q06481 763 aa10.95□□□□□ -0.66
MACF1-226ENST00000497964 RANGAP1P46060 587 aaPredicted RBP10.95□□□□□ -0.66
MACF1-226ENST00000497964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.91□□□□□ -0.66
MACF1-226ENST00000497964 UBTFP17480 764 aaKnown RBP10.88□□□□□ -0.67
MACF1-226ENST00000497964 DIEXFQ68CQ4 756 aaKnown RBP10.8□□□□□ -0.68
MACF1-226ENST00000497964 MYO15BQ96JP2 1530 aa10.78□□□□□ -0.68
MACF1-226ENST00000497964 GTF3C3Q9Y5Q9 886 aa10.76□□□□□ -0.69
MACF1-226ENST00000497964 MYT1Q01538 1121 aa10.74□□□□□ -0.69
MACF1-226ENST00000497964 HNRNPUL2Q1KMD3 747 aaKnown RBP10.73□□□□□ -0.69
MACF1-226ENST00000497964 SCAF1Q9H7N4 1312 aaKnown RBP10.67□□□□□ -0.7
MACF1-226ENST00000497964 ACIN1Q9UKV3 1341 aaKnown RBP10.66□□□□□ -0.7
MACF1-226ENST00000497964 DCAF1Q9Y4B6 1507 aa10.64□□□□□ -0.71
MACF1-226ENST00000497964 ATP1B4Q9UN42 357 aaPredicted RBP10.6□□□□□ -0.71
MACF1-226ENST00000497964 ITGAEP38570 1179 aa10.6□□□□□ -0.71
MACF1-226ENST00000497964 NEUROD1Q13562 356 aa10.59□□□□□ -0.71
MACF1-226ENST00000497964 ERICH6Q7L0X2 663 aa10.57□□□□□ -0.72
MACF1-226ENST00000497964 ZCCHC6Q5VYS8 1495 aaKnown RBP10.56□□□□□ -0.72
MACF1-226ENST00000497964 NEFLP07196 543 aa10.55□□□□□ -0.72
MACF1-226ENST00000497964 AEBP2Q6ZN18 517 aaPredicted RBP10.54□□□□□ -0.72
MACF1-226ENST00000497964 ZNF316A6NFI3 1004 aaPredicted RBP10.52□□□□□ -0.73
MACF1-226ENST00000497964 BCANQ96GW7 911 aa10.45□□□□□ -0.74
MACF1-226ENST00000497964 CSRNP3Q8WYN3 585 aa10.36□□□□□ -0.75
MACF1-226ENST00000497964 MIER1Q8N108 512 aa10.35□□□□□ -0.75
MACF1-226ENST00000497964 CNGB1Q14028 1251 aaPredicted RBP10.34□□□□□ -0.75
MACF1-226ENST00000497964 ABCC9O60706 1549 aa10.33□□□□□ -0.76
MACF1-226ENST00000497964 CCDC180Q9P1Z9 1646 aa10.32□□□□□ -0.76
MACF1-226ENST00000497964 PABPN1Q86U42 306 aaKnown RBP eCLIP10.29□□□□□ -0.76
MACF1-226ENST00000497964 SCRIBQ14160 1630 aa10.27□□□□□ -0.76
MACF1-226ENST00000497964 FAM50AQ14320 339 aaKnown RBP10.27□□□□□ -0.77
MACF1-226ENST00000497964 POLR3GLQ9BT43 218 aa10.26□□□□□ -0.77
MACF1-226ENST00000497964 RSF1Q96T23 1441 aaPredicted RBP10.25□□□□□ -0.77
MACF1-226ENST00000497964 FKBP8Q14318 412 aa10.21□□□□□ -0.78
MACF1-226ENST00000497964 ANP32CO43423 234 aa10.18□□□□□ -0.78
MACF1-226ENST00000497964 DDX10Q13206 875 aaKnown RBP10.17□□□□□ -0.78
MACF1-226ENST00000497964 TRIM52Q96A61 297 aa10.14□□□□□ -0.79
MACF1-226ENST00000497964 CEP162Q5TB80 1403 aa10.13□□□□□ -0.79
MACF1-226ENST00000497964 P3H3Q8IVL6 736 aa10.13□□□□□ -0.79
MACF1-226ENST00000497964 HIRIP3Q9BW71 556 aaPredicted RBP10.12□□□□□ -0.79
MACF1-226ENST00000497964 CDK11AQ9UQ88 783 aaPredicted RBP10.12□□□□□ -0.79
MACF1-226ENST00000497964 CLSPNQ9HAW4 1339 aa10.08□□□□□ -0.8
MACF1-226ENST00000497964 RTL5Q5HYW3 569 aaPredicted RBP10.06□□□□□ -0.8
MACF1-226ENST00000497964 CLIP1P30622 1438 aa10.05□□□□□ -0.8
MACF1-226ENST00000497964 SUPT16HQ9Y5B9 1047 aaKnown RBP10.05□□□□□ -0.8
MACF1-226ENST00000497964 IRX6P78412 446 aaPredicted RBP10.04□□□□□ -0.8
MACF1-226ENST00000497964 HNRNPUQ00839 825 aaKnown RBP eCLIP10.04□□□□□ -0.8
MACF1-226ENST00000497964 RB1CC1Q8TDY2 1594 aa10.04□□□□□ -0.8
MACF1-226ENST00000497964 CECR2Q9BXF3 1484 aa10.04□□□□□ -0.8
MACF1-226ENST00000497964 DAXXQ9UER7 740 aaPredicted RBP10.03□□□□□ -0.8
MACF1-226ENST00000497964 TNIKQ9UKE5 1360 aa10.01□□□□□ -0.81
MACF1-226ENST00000497964 ZNF326Q5BKZ1 582 aaKnown RBP10.01□□□□□ -0.81
MACF1-226ENST00000497964 ANP32EQ9BTT0 268 aa10□□□□□ -0.81
MACF1-226ENST00000497964 SOGA1O94964 1423 aa10□□□□□ -0.81
MACF1-226ENST00000497964 FAM9BQ8IZU0 186 aa9.97□□□□□ -0.81
MACF1-226ENST00000497964 ARID3CA6NKF2 412 aa9.97□□□□□ -0.81
MACF1-226ENST00000497964 GOLGA3Q08378 1498 aa9.97□□□□□ -0.81
MACF1-226ENST00000497964 TONSLQ96HA7 1378 aa9.95□□□□□ -0.82
MACF1-226ENST00000497964 NBR1Q14596 966 aa9.93□□□□□ -0.82
MACF1-226ENST00000497964 SIN3AQ96ST3 1273 aa9.93□□□□□ -0.82
MACF1-226ENST00000497964 NPM2Q86SE8 214 aaKnown RBP9.93□□□□□ -0.82
MACF1-226ENST00000497964 EEA1Q15075 1411 aa9.92□□□□□ -0.82
MACF1-226ENST00000497964 CCDC88BA6NC98 1476 aa9.92□□□□□ -0.82
MACF1-226ENST00000497964 WRNQ14191 1432 aaPredicted RBP eCLIP9.91□□□□□ -0.82
MACF1-226ENST00000497964 ABCC8Q09428 1581 aa9.9□□□□□ -0.82
MACF1-226ENST00000497964 MROH2BQ7Z745 1585 aa9.9□□□□□ -0.82
MACF1-226ENST00000497964 SENP3-EIF4A1A0A087X0R7 540 aa9.89□□□□□ -0.83
MACF1-226ENST00000497964 TSHZ2Q9NRE2 1034 aa9.89□□□□□ -0.83
MACF1-226ENST00000497964 ANP32AP39687 249 aaKnown RBP9.89□□□□□ -0.83
MACF1-226ENST00000497964 CHIC2Q9UKJ5 165 aa9.89□□□□□ -0.83
MACF1-226ENST00000497964 SALL2Q9Y467 1007 aaPredicted RBP9.87□□□□□ -0.83
MACF1-226ENST00000497964 KCNH8Q96L42 1107 aa9.87□□□□□ -0.83
MACF1-226ENST00000497964 MRS2Q9HD23 443 aa9.86□□□□□ -0.83
MACF1-226ENST00000497964 KANK4Q5T7N3 995 aaPredicted RBP9.86□□□□□ -0.83
MACF1-226ENST00000497964 BCL11AQ9H165 835 aa9.85□□□□□ -0.83
MACF1-226ENST00000497964 CEP164Q9UPV0 1460 aa9.85□□□□□ -0.83
MACF1-226ENST00000497964 RBM19Q9Y4C8 960 aaKnown RBP9.85□□□□□ -0.83
MACF1-226ENST00000497964 CCDC136Q96JN2 1154 aa9.84□□□□□ -0.83
MACF1-226ENST00000497964 RUSC2Q8N2Y8 1516 aa9.8□□□□□ -0.84
MACF1-226ENST00000497964 VPS8Q8N3P4 1428 aa9.8□□□□□ -0.84
MACF1-226ENST00000497964 RRP7BPQ9NSQ0 103 aa9.8□□□□□ -0.84
MACF1-226ENST00000497964 MYT1LQ9UL68 1186 aa9.8□□□□□ -0.84
MACF1-226ENST00000497964 ZBTB47Q9UFB7 747 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms