RNA–Protein interactions for RNA: ENST00000515417.5

RACK1-234, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-234ENST00000515417 NISCHQ9Y2I1 1504 aa23.56■■□□□ 1.36
RACK1-234ENST00000515417 ABCC9O60706 1549 aa21.04■□□□□ 0.96
RACK1-234ENST00000515417 CCDC180Q9P1Z9 1646 aa20.86■□□□□ 0.93
RACK1-234ENST00000515417 DNAJC5BQ9UF47 199 aa20.13■□□□□ 0.81
RACK1-234ENST00000515417 DCAF8L2P0C7V8 631 aa19.79■□□□□ 0.76
RACK1-234ENST00000515417 RB1CC1Q8TDY2 1594 aa19.7■□□□□ 0.74
RACK1-234ENST00000515417 PABPN1Q86U42 306 aaKnown RBP eCLIP19.64■□□□□ 0.73
RACK1-234ENST00000515417 ZCCHC6Q5VYS8 1495 aaKnown RBP19.64■□□□□ 0.73
RACK1-234ENST00000515417 NACADO15069 1562 aa19.63■□□□□ 0.73
RACK1-234ENST00000515417 MYO15BQ96JP2 1530 aa19.47■□□□□ 0.71
RACK1-234ENST00000515417 DCAF1Q9Y4B6 1507 aa19.42■□□□□ 0.7
RACK1-234ENST00000515417 UNC13AQ9UPW8 1703 aa19.38■□□□□ 0.69
RACK1-234ENST00000515417 BICRAQ9NZM4 1560 aa19.28■□□□□ 0.68
RACK1-234ENST00000515417 SCRIBQ14160 1630 aa19.18■□□□□ 0.66
RACK1-234ENST00000515417 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
RACK1-234ENST00000515417 CECR2Q9BXF3 1484 aa18.9■□□□□ 0.62
RACK1-234ENST00000515417 SHROOM4Q9ULL8 1493 aa18.82■□□□□ 0.6
RACK1-234ENST00000515417 EIF4G1Q04637 1599 aaKnown RBP18.77■□□□□ 0.6
RACK1-234ENST00000515417 DNAJC5Q9H3Z4 198 aa18.5■□□□□ 0.55
RACK1-234ENST00000515417 SMARCA4P51532 1647 aa18.28■□□□□ 0.52
RACK1-234ENST00000515417 BAZ1AQ9NRL2 1556 aaPredicted RBP18.23■□□□□ 0.51
RACK1-234ENST00000515417 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
RACK1-234ENST00000515417 ATAD2BQ9ULI0 1458 aa18.2■□□□□ 0.5
RACK1-234ENST00000515417 NCAPD3P42695 1498 aa18.14■□□□□ 0.5
RACK1-234ENST00000515417 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
RACK1-234ENST00000515417 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
RACK1-234ENST00000515417 HMGXB3Q12766 1538 aa18.05■□□□□ 0.48
RACK1-234ENST00000515417 BAZ1BQ9UIG0 1483 aaKnown RBP18.05■□□□□ 0.48
RACK1-234ENST00000515417 PEG3Q9GZU2 1588 aa18.04■□□□□ 0.48
RACK1-234ENST00000515417 CUX2O14529 1486 aa18.04■□□□□ 0.48
RACK1-234ENST00000515417 NESP48681 1621 aa18.03■□□□□ 0.48
RACK1-234ENST00000515417 RSF1Q96T23 1441 aaPredicted RBP17.99■□□□□ 0.47
RACK1-234ENST00000515417 WIZO95785 1651 aa17.99■□□□□ 0.47
RACK1-234ENST00000515417 TOP2AP11388 1531 aaKnown RBP17.78■□□□□ 0.44
RACK1-234ENST00000515417 THOC2Q8NI27 1593 aaKnown RBP17.77■□□□□ 0.44
RACK1-234ENST00000515417 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
RACK1-234ENST00000515417 KIF21AQ7Z4S6 1674 aa17.69■□□□□ 0.42
RACK1-234ENST00000515417 CADPSQ9ULU8 1353 aa17.65■□□□□ 0.42
RACK1-234ENST00000515417 LAMC3Q9Y6N6 1575 aa17.64■□□□□ 0.41
RACK1-234ENST00000515417 SUPT5HO00267 1087 aaKnown RBP17.62■□□□□ 0.41
RACK1-234ENST00000515417 CCDC88BA6NC98 1476 aa17.6■□□□□ 0.41
RACK1-234ENST00000515417 PDS5BQ9NTI5 1447 aa17.55■□□□□ 0.4
RACK1-234ENST00000515417 CFTRP13569 1480 aa17.53■□□□□ 0.4
RACK1-234ENST00000515417 FANCD2Q9BXW9 1451 aa17.46■□□□□ 0.39
RACK1-234ENST00000515417 MRC2Q9UBG0 1479 aa17.46■□□□□ 0.39
RACK1-234ENST00000515417 CEP164Q9UPV0 1460 aa17.43■□□□□ 0.38
RACK1-234ENST00000515417 WDR62O43379 1518 aa17.42■□□□□ 0.38
RACK1-234ENST00000515417 URB2Q14146 1524 aaKnown RBP17.31■□□□□ 0.36
RACK1-234ENST00000515417 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
RACK1-234ENST00000515417 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
RACK1-234ENST00000515417 TOPBP1Q92547 1522 aa17.18■□□□□ 0.34
RACK1-234ENST00000515417 ZNF608Q9ULD9 1512 aaPredicted RBP17.15■□□□□ 0.34
RACK1-234ENST00000515417 DNMBPQ6XZF7 1577 aa17.14■□□□□ 0.33
RACK1-234ENST00000515417 RIMBP3CA6NJZ7 1639 aa17.11■□□□□ 0.33
RACK1-234ENST00000515417 RIMBP3BA6NNM3 1639 aa17.11■□□□□ 0.33
RACK1-234ENST00000515417 RIMBP3Q9UFD9 1639 aa17.11■□□□□ 0.33
RACK1-234ENST00000515417 ABCC8Q09428 1581 aa17.08■□□□□ 0.32
RACK1-234ENST00000515417 CUX1P39880 1505 aa17.08■□□□□ 0.32
RACK1-234ENST00000515417 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
RACK1-234ENST00000515417 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
RACK1-234ENST00000515417 RAD54L2Q9Y4B4 1467 aa17.02■□□□□ 0.32
RACK1-234ENST00000515417 FGD5Q6ZNL6 1462 aa17.01■□□□□ 0.31
RACK1-234ENST00000515417 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
RACK1-234ENST00000515417 CYB5RLQ6IPT4 315 aa17■□□□□ 0.31
RACK1-234ENST00000515417 SOGA1O94964 1423 aa16.96■□□□□ 0.31
RACK1-234ENST00000515417 TARBP1Q13395 1621 aaKnown RBP16.96■□□□□ 0.31
RACK1-234ENST00000515417 AQRO60306 1485 aaKnown RBP eCLIP16.96■□□□□ 0.311e-12■■■■■ 79.8
RACK1-234ENST00000515417 WRNQ14191 1432 aaPredicted RBP eCLIP16.96■□□□□ 0.3
RACK1-234ENST00000515417 SYNJ1O43426 1573 aa16.94■□□□□ 0.3
RACK1-234ENST00000515417 EIF4G3O43432 1585 aaKnown RBP16.93■□□□□ 0.3
RACK1-234ENST00000515417 TDRD9Q8NDG6 1382 aaKnown RBP16.92■□□□□ 0.3
RACK1-234ENST00000515417 FBLN2P98095 1184 aa16.91■□□□□ 0.3
RACK1-234ENST00000515417 CHD1O14646 1710 aa16.88■□□□□ 0.29
RACK1-234ENST00000515417 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
RACK1-234ENST00000515417 TRHP20396 242 aaPredicted RBP16.87■□□□□ 0.29
RACK1-234ENST00000515417 ARAP1Q96P48 1450 aa16.86■□□□□ 0.29
RACK1-234ENST00000515417 BIVM-ERCC5R4GMW8 1640 aa16.85■□□□□ 0.29
RACK1-234ENST00000515417 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
RACK1-234ENST00000515417 WDR97A6NE52 1622 aa16.81■□□□□ 0.28
RACK1-234ENST00000515417 SNAPC4Q5SXM2 1469 aa16.78■□□□□ 0.28
RACK1-234ENST00000515417 GAPVD1Q14C86 1478 aa16.77■□□□□ 0.28
RACK1-234ENST00000515417 GRIN2BQ13224 1484 aa16.75■□□□□ 0.27
RACK1-234ENST00000515417 ABCA5Q8WWZ7 1642 aa16.74■□□□□ 0.27
RACK1-234ENST00000515417 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
RACK1-234ENST00000515417 MAGI1Q96QZ7 1491 aaPredicted RBP16.68■□□□□ 0.26
RACK1-234ENST00000515417 CHMP7Q8WUX9 453 aaPredicted RBP16.66■□□□□ 0.26
RACK1-234ENST00000515417 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
RACK1-234ENST00000515417 SYNJ2O15056 1496 aa16.64■□□□□ 0.25
RACK1-234ENST00000515417 ADAMTS12P58397 1594 aa16.6■□□□□ 0.25
RACK1-234ENST00000515417 KIF27Q86VH2 1401 aa16.58■□□□□ 0.24
RACK1-234ENST00000515417 ERICH3Q5RHP9 1530 aa16.58■□□□□ 0.24
RACK1-234ENST00000515417 FHAD1B1AJZ9 1412 aa16.56■□□□□ 0.24
RACK1-234ENST00000515417 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
RACK1-234ENST00000515417 IGF1RP08069 1367 aa16.53■□□□□ 0.24
RACK1-234ENST00000515417 ERCC6L2Q5T890 1561 aa16.52■□□□□ 0.24
RACK1-234ENST00000515417 AEBP2Q6ZN18 517 aaPredicted RBP16.52■□□□□ 0.24
RACK1-234ENST00000515417 RUSC2Q8N2Y8 1516 aa16.51■□□□□ 0.23
RACK1-234ENST00000515417 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
RACK1-234ENST00000515417 NUP160Q12769 1436 aa16.46■□□□□ 0.23
RACK1-234ENST00000515417 CARMIL1Q5VZK9 1371 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms