RNA–Protein interactions for RNA: ENST00000511049.5

CAST-234, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-234ENST00000511049 NISCHQ9Y2I1 1504 aa15.73■□□□□ 0.11
CAST-234ENST00000511049 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
CAST-234ENST00000511049 DCAF8L2P0C7V8 631 aa14.13□□□□□ -0.15
CAST-234ENST00000511049 SHROOM4Q9ULL8 1493 aa14.04□□□□□ -0.16
CAST-234ENST00000511049 SUPT5HO00267 1087 aaKnown RBP13.7□□□□□ -0.22
CAST-234ENST00000511049 MYO15BQ96JP2 1530 aa13.56□□□□□ -0.24
CAST-234ENST00000511049 DCAF1Q9Y4B6 1507 aa13.36□□□□□ -0.27
CAST-234ENST00000511049 ZCCHC6Q5VYS8 1495 aaKnown RBP13.18□□□□□ -0.3
CAST-234ENST00000511049 ABCC9O60706 1549 aa13.13□□□□□ -0.31
CAST-234ENST00000511049 EHMT2Q96KQ7 1210 aa12.99□□□□□ -0.33
CAST-234ENST00000511049 NACADO15069 1562 aa12.94□□□□□ -0.34
CAST-234ENST00000511049 SCRIBQ14160 1630 aa12.84□□□□□ -0.35
CAST-234ENST00000511049 CHIC1Q5VXU3 224 aa12.82□□□□□ -0.36
CAST-234ENST00000511049 FAM9AQ8IZU1 332 aaPredicted RBP12.79□□□□□ -0.36
CAST-234ENST00000511049 PABPN1Q86U42 306 aaKnown RBP eCLIP12.75□□□□□ -0.37
CAST-234ENST00000511049 LOC105371045A0A1W2PR82 267 aa12.73□□□□□ -0.37
CAST-234ENST00000511049 RB1CC1Q8TDY2 1594 aa12.69□□□□□ -0.38
CAST-234ENST00000511049 UNC13AQ9UPW8 1703 aa12.59□□□□□ -0.39
CAST-234ENST00000511049 TRIM41Q8WV44 630 aa12.57□□□□□ -0.4
CAST-234ENST00000511049 CECR2Q9BXF3 1484 aa12.54□□□□□ -0.4
CAST-234ENST00000511049 PCGF6Q9BYE7 350 aa12.52□□□□□ -0.41
CAST-234ENST00000511049 RSF1Q96T23 1441 aaPredicted RBP12.51□□□□□ -0.41
CAST-234ENST00000511049 PPARGC1BQ86YN6 1023 aaKnown RBP12.46□□□□□ -0.41
CAST-234ENST00000511049 TTBK1Q5TCY1 1321 aaPredicted RBP12.44□□□□□ -0.42
CAST-234ENST00000511049 MROH2BQ7Z745 1585 aa12.36□□□□□ -0.43
CAST-234ENST00000511049 RANGAP1P46060 587 aaPredicted RBP12.33□□□□□ -0.44
CAST-234ENST00000511049 BICRAQ9NZM4 1560 aa12.3□□□□□ -0.44
CAST-234ENST00000511049 PEG3Q9GZU2 1588 aa12.28□□□□□ -0.44
CAST-234ENST00000511049 WIZO95785 1651 aa12.27□□□□□ -0.45
CAST-234ENST00000511049 UBTFP17480 764 aaKnown RBP12.13□□□□□ -0.47
CAST-234ENST00000511049 SMARCA2P51531 1590 aa12.11□□□□□ -0.47
CAST-234ENST00000511049 ABCC8Q09428 1581 aa12.08□□□□□ -0.48
CAST-234ENST00000511049 BAZ1AQ9NRL2 1556 aaPredicted RBP12.07□□□□□ -0.48
CAST-234ENST00000511049 CCDC88BA6NC98 1476 aa12.05□□□□□ -0.48
CAST-234ENST00000511049 HRCP23327 699 aa12.01□□□□□ -0.49
CAST-234ENST00000511049 TRIM26Q12899 539 aaPredicted RBP12□□□□□ -0.49
CAST-234ENST00000511049 SMARCA4P51532 1647 aa11.99□□□□□ -0.49
CAST-234ENST00000511049 SOGA1O94964 1423 aa11.97□□□□□ -0.49
CAST-234ENST00000511049 HMGXB3Q12766 1538 aa11.97□□□□□ -0.49
CAST-234ENST00000511049 PRDM2Q13029 1718 aa11.95□□□□□ -0.5
CAST-234ENST00000511049 RUSC2Q8N2Y8 1516 aa11.92□□□□□ -0.5
CAST-234ENST00000511049 BAZ1BQ9UIG0 1483 aaKnown RBP11.9□□□□□ -0.5
CAST-234ENST00000511049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.9□□□□□ -0.5
CAST-234ENST00000511049 CSRNP3Q8WYN3 585 aa11.9□□□□□ -0.5
CAST-234ENST00000511049 TOP2AP11388 1531 aaKnown RBP11.89□□□□□ -0.51
CAST-234ENST00000511049 ATAD2BQ9ULI0 1458 aa11.86□□□□□ -0.51
CAST-234ENST00000511049 WRNQ14191 1432 aaPredicted RBP eCLIP11.82□□□□□ -0.52
CAST-234ENST00000511049 DNAJC5BQ9UF47 199 aa11.8□□□□□ -0.52
CAST-234ENST00000511049 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
CAST-234ENST00000511049 CCER1Q8TC90 406 aaPredicted RBP11.8□□□□□ -0.52
CAST-234ENST00000511049 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
CAST-234ENST00000511049 APLP2Q06481 763 aa11.75□□□□□ -0.53
CAST-234ENST00000511049 EIF4G1Q04637 1599 aaKnown RBP11.75□□□□□ -0.53
CAST-234ENST00000511049 P3H3Q8IVL6 736 aa11.74□□□□□ -0.53
CAST-234ENST00000511049 ITGAEP38570 1179 aa11.73□□□□□ -0.53
CAST-234ENST00000511049 CEP162Q5TB80 1403 aa11.72□□□□□ -0.53
CAST-234ENST00000511049 WDR97A6NE52 1622 aa11.71□□□□□ -0.53
CAST-234ENST00000511049 NCAPD3P42695 1498 aa11.7□□□□□ -0.54
CAST-234ENST00000511049 SYNJ1O43426 1573 aa11.66□□□□□ -0.54
CAST-234ENST00000511049 RAPGEF2Q9Y4G8 1499 aa11.61□□□□□ -0.55
CAST-234ENST00000511049 ARID3CA6NKF2 412 aa11.6□□□□□ -0.55
CAST-234ENST00000511049 CLIP1P30622 1438 aa11.58□□□□□ -0.56
CAST-234ENST00000511049 TNIKQ9UKE5 1360 aa11.58□□□□□ -0.56
CAST-234ENST00000511049 GOLGA3Q08378 1498 aa11.57□□□□□ -0.56
CAST-234ENST00000511049 NESP48681 1621 aa11.56□□□□□ -0.56
CAST-234ENST00000511049 CC2D2AQ9P2K1 1620 aa11.55□□□□□ -0.56
CAST-234ENST00000511049 LAMC3Q9Y6N6 1575 aa11.53□□□□□ -0.56
CAST-234ENST00000511049 KANK4Q5T7N3 995 aaPredicted RBP11.52□□□□□ -0.57
CAST-234ENST00000511049 CEP164Q9UPV0 1460 aa11.51□□□□□ -0.57
CAST-234ENST00000511049 CUX2O14529 1486 aa11.5□□□□□ -0.57
CAST-234ENST00000511049 CADPSQ9ULU8 1353 aa11.5□□□□□ -0.57
CAST-234ENST00000511049 ZEB1P37275 1124 aaPredicted RBP11.49□□□□□ -0.57
CAST-234ENST00000511049 EEA1Q15075 1411 aa11.48□□□□□ -0.57
CAST-234ENST00000511049 CUX1P39880 1505 aa11.47□□□□□ -0.57
CAST-234ENST00000511049 KIF27Q86VH2 1401 aa11.46□□□□□ -0.57
CAST-234ENST00000511049 TDRD9Q8NDG6 1382 aaKnown RBP11.46□□□□□ -0.58
CAST-234ENST00000511049 RAD54L2Q9Y4B4 1467 aa11.46□□□□□ -0.58
CAST-234ENST00000511049 FBLN2P98095 1184 aa11.45□□□□□ -0.58
CAST-234ENST00000511049 FAM50AQ14320 339 aaKnown RBP11.45□□□□□ -0.58
CAST-234ENST00000511049 CFTRP13569 1480 aa11.44□□□□□ -0.58
CAST-234ENST00000511049 FANCD2Q9BXW9 1451 aa11.41□□□□□ -0.58
CAST-234ENST00000511049 YTHDC1Q96MU7 727 aaKnown RBP11.4□□□□□ -0.58
CAST-234ENST00000511049 FGD5Q6ZNL6 1462 aa11.39□□□□□ -0.59
CAST-234ENST00000511049 CARMIL1Q5VZK9 1371 aa11.39□□□□□ -0.59
CAST-234ENST00000511049 TOP2BQ02880 1626 aa11.38□□□□□ -0.59
CAST-234ENST00000511049 IGF1RP08069 1367 aa11.38□□□□□ -0.59
CAST-234ENST00000511049 VPS8Q8N3P4 1428 aa11.36□□□□□ -0.59
CAST-234ENST00000511049 ARAP1Q96P48 1450 aa11.33□□□□□ -0.6
CAST-234ENST00000511049 KIF21BO75037 1637 aa11.33□□□□□ -0.6
CAST-234ENST00000511049 NEUROD1Q13562 356 aa11.32□□□□□ -0.6
CAST-234ENST00000511049 DIEXFQ68CQ4 756 aaKnown RBP11.32□□□□□ -0.6
CAST-234ENST00000511049 THOC2Q8NI27 1593 aaKnown RBP11.31□□□□□ -0.6
CAST-234ENST00000511049 PRXQ9BXM0 1461 aa11.3□□□□□ -0.6
CAST-234ENST00000511049 FHOD3Q2V2M9 1422 aa11.29□□□□□ -0.6
CAST-234ENST00000511049 CHIC2Q9UKJ5 165 aa11.26□□□□□ -0.61
CAST-234ENST00000511049 WDR62O43379 1518 aa11.26□□□□□ -0.61
CAST-234ENST00000511049 POLA1P09884 1462 aaPredicted RBP11.26□□□□□ -0.61
CAST-234ENST00000511049 HIRIP3Q9BW71 556 aaPredicted RBP11.25□□□□□ -0.61
CAST-234ENST00000511049 AQRO60306 1485 aaKnown RBP eCLIP11.24□□□□□ -0.612e-6■■■■□ 24.4
CAST-234ENST00000511049 ARHGAP35Q9NRY4 1499 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms