RNA–Protein interactions for RNA: ENST00000502548.5

RACK1-202, Transcript of receptor for activated C kinase 1, humanhuman

TSL 1 (best)

Gene RACK1, Length 1,090 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-202ENST00000502548 NISCHQ9Y2I1 1504 aa31.41■■■□□ 2.62
RACK1-202ENST00000502548 CCDC180Q9P1Z9 1646 aa27.78■■■□□ 2.04
RACK1-202ENST00000502548 ABCC9O60706 1549 aa27.46■■□□□ 1.99
RACK1-202ENST00000502548 DCAF8L2P0C7V8 631 aa26.49■■□□□ 1.83
RACK1-202ENST00000502548 RB1CC1Q8TDY2 1594 aa26.31■■□□□ 1.8
RACK1-202ENST00000502548 NACADO15069 1562 aa26.29■■□□□ 1.8
RACK1-202ENST00000502548 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.77
RACK1-202ENST00000502548 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
RACK1-202ENST00000502548 DCAF1Q9Y4B6 1507 aa25.97■■□□□ 1.75
RACK1-202ENST00000502548 PABPN1Q86U42 306 aaKnown RBP eCLIP25.78■■□□□ 1.72
RACK1-202ENST00000502548 BICRAQ9NZM4 1560 aa25.49■■□□□ 1.67
RACK1-202ENST00000502548 UNC13AQ9UPW8 1703 aa25.46■■□□□ 1.67
RACK1-202ENST00000502548 DNAJC5BQ9UF47 199 aa25.43■■□□□ 1.66
RACK1-202ENST00000502548 SCRIBQ14160 1630 aa25.4■■□□□ 1.66
RACK1-202ENST00000502548 SHROOM4Q9ULL8 1493 aa25.26■■□□□ 1.63
RACK1-202ENST00000502548 EIF4G1Q04637 1599 aaKnown RBP24.85■■□□□ 1.57
RACK1-202ENST00000502548 CC2D2AQ9P2K1 1620 aa24.75■■□□□ 1.55
RACK1-202ENST00000502548 CECR2Q9BXF3 1484 aa24.7■■□□□ 1.55
RACK1-202ENST00000502548 NCAPD3P42695 1498 aa24.36■■□□□ 1.49
RACK1-202ENST00000502548 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
RACK1-202ENST00000502548 BAZ1AQ9NRL2 1556 aaPredicted RBP24.32■■□□□ 1.48
RACK1-202ENST00000502548 SMARCA4P51532 1647 aa24.29■■□□□ 1.48
RACK1-202ENST00000502548 SMARCA2P51531 1590 aa24.22■■□□□ 1.47
RACK1-202ENST00000502548 MROH2BQ7Z745 1585 aa24.2■■□□□ 1.46
RACK1-202ENST00000502548 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
RACK1-202ENST00000502548 PEG3Q9GZU2 1588 aa24.09■■□□□ 1.45
RACK1-202ENST00000502548 BAZ1BQ9UIG0 1483 aaKnown RBP24.08■■□□□ 1.45
RACK1-202ENST00000502548 RSF1Q96T23 1441 aaPredicted RBP23.97■■□□□ 1.43
RACK1-202ENST00000502548 WIZO95785 1651 aa23.83■■□□□ 1.41
RACK1-202ENST00000502548 NESP48681 1621 aa23.72■■□□□ 1.39
RACK1-202ENST00000502548 ERCC6Q03468 1493 aa23.69■■□□□ 1.38
RACK1-202ENST00000502548 CADPSQ9ULU8 1353 aa23.67■■□□□ 1.38
RACK1-202ENST00000502548 TOP2AP11388 1531 aaKnown RBP23.62■■□□□ 1.37
RACK1-202ENST00000502548 LAMC3Q9Y6N6 1575 aa23.6■■□□□ 1.37
RACK1-202ENST00000502548 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
RACK1-202ENST00000502548 CFTRP13569 1480 aa23.46■■□□□ 1.35
RACK1-202ENST00000502548 CUX2O14529 1486 aa23.45■■□□□ 1.34
RACK1-202ENST00000502548 CCDC88BA6NC98 1476 aa23.44■■□□□ 1.34
RACK1-202ENST00000502548 SUPT5HO00267 1087 aaKnown RBP23.38■■□□□ 1.33
RACK1-202ENST00000502548 FANCD2Q9BXW9 1451 aa23.32■■□□□ 1.32
RACK1-202ENST00000502548 CEP164Q9UPV0 1460 aa23.28■■□□□ 1.32
RACK1-202ENST00000502548 MRC2Q9UBG0 1479 aa23.27■■□□□ 1.32
RACK1-202ENST00000502548 THOC2Q8NI27 1593 aaKnown RBP23.25■■□□□ 1.31
RACK1-202ENST00000502548 KIF21AQ7Z4S6 1674 aa23.25■■□□□ 1.31
RACK1-202ENST00000502548 WDR62O43379 1518 aa23.14■■□□□ 1.3
RACK1-202ENST00000502548 URB2Q14146 1524 aaKnown RBP23.06■■□□□ 1.28
RACK1-202ENST00000502548 DNAJC5Q9H3Z4 198 aa23■■□□□ 1.27
RACK1-202ENST00000502548 ABCC8Q09428 1581 aa22.96■■□□□ 1.27
RACK1-202ENST00000502548 PRDM2Q13029 1718 aa22.91■■□□□ 1.26
RACK1-202ENST00000502548 TOPBP1Q92547 1522 aa22.91■■□□□ 1.26
RACK1-202ENST00000502548 DNMBPQ6XZF7 1577 aa22.82■■□□□ 1.24
RACK1-202ENST00000502548 IFT140Q96RY7 1462 aa22.82■■□□□ 1.24
RACK1-202ENST00000502548 SOGA1O94964 1423 aa22.72■■□□□ 1.23
RACK1-202ENST00000502548 POLA1P09884 1462 aaPredicted RBP22.72■■□□□ 1.23
RACK1-202ENST00000502548 ZNF608Q9ULD9 1512 aaPredicted RBP22.71■■□□□ 1.23
RACK1-202ENST00000502548 CUX1P39880 1505 aa22.68■■□□□ 1.22
RACK1-202ENST00000502548 RAD54L2Q9Y4B4 1467 aa22.66■■□□□ 1.22
RACK1-202ENST00000502548 OSCARQ8IYS5 282 aa22.64■■□□□ 1.21
RACK1-202ENST00000502548 FGD5Q6ZNL6 1462 aa22.64■■□□□ 1.21
RACK1-202ENST00000502548 AQRO60306 1485 aaKnown RBP eCLIP22.63■■□□□ 1.211e-12■■■■■ 75.3
RACK1-202ENST00000502548 TDRD9Q8NDG6 1382 aaKnown RBP22.61■■□□□ 1.21
RACK1-202ENST00000502548 TARBP1Q13395 1621 aaKnown RBP22.59■■□□□ 1.21
RACK1-202ENST00000502548 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.21
RACK1-202ENST00000502548 EIF4G3O43432 1585 aaKnown RBP22.48■■□□□ 1.19
RACK1-202ENST00000502548 FBLN2P98095 1184 aa22.46■■□□□ 1.19
RACK1-202ENST00000502548 ABCA10Q8WWZ4 1543 aa22.43■■□□□ 1.18
RACK1-202ENST00000502548 TOP2BQ02880 1626 aa22.42■■□□□ 1.18
RACK1-202ENST00000502548 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
RACK1-202ENST00000502548 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
RACK1-202ENST00000502548 SYNJ1O43426 1573 aa22.4■■□□□ 1.18
RACK1-202ENST00000502548 GAPVD1Q14C86 1478 aa22.4■■□□□ 1.18
RACK1-202ENST00000502548 CHMP7Q8WUX9 453 aaPredicted RBP22.39■■□□□ 1.17
RACK1-202ENST00000502548 BIVM-ERCC5R4GMW8 1640 aa22.35■■□□□ 1.17
RACK1-202ENST00000502548 SNAPC4Q5SXM2 1469 aa22.34■■□□□ 1.17
RACK1-202ENST00000502548 MAGI1Q96QZ7 1491 aaPredicted RBP22.32■■□□□ 1.16
RACK1-202ENST00000502548 SYNJ2O15056 1496 aa22.26■■□□□ 1.15
RACK1-202ENST00000502548 ABCA5Q8WWZ7 1642 aa22.23■■□□□ 1.15
RACK1-202ENST00000502548 TRIM41Q8WV44 630 aa22.19■■□□□ 1.14
RACK1-202ENST00000502548 FHAD1B1AJZ9 1412 aa22.15■■□□□ 1.14
RACK1-202ENST00000502548 KIF27Q86VH2 1401 aa22.14■■□□□ 1.14
RACK1-202ENST00000502548 ERICH3Q5RHP9 1530 aa22.14■■□□□ 1.13
RACK1-202ENST00000502548 CHD1O14646 1710 aa22.13■■□□□ 1.13
RACK1-202ENST00000502548 IGF1RP08069 1367 aa22.12■■□□□ 1.13
RACK1-202ENST00000502548 PBRM1Q86U86 1689 aa22.1■■□□□ 1.13
RACK1-202ENST00000502548 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
RACK1-202ENST00000502548 ARHGEF11O15085 1522 aa22.08■■□□□ 1.13
RACK1-202ENST00000502548 CYB5RLQ6IPT4 315 aa22.07■■□□□ 1.12
RACK1-202ENST00000502548 CLASP1Q7Z460 1538 aa22.03■■□□□ 1.12
RACK1-202ENST00000502548 ADAMTS12P58397 1594 aa22.03■■□□□ 1.12
RACK1-202ENST00000502548 NUP160Q12769 1436 aa22.02■■□□□ 1.12
RACK1-202ENST00000502548 RIMBP3CA6NJZ7 1639 aa22.01■■□□□ 1.11
RACK1-202ENST00000502548 RIMBP3BA6NNM3 1639 aa22.01■■□□□ 1.11
RACK1-202ENST00000502548 RIMBP3Q9UFD9 1639 aa22.01■■□□□ 1.11
RACK1-202ENST00000502548 CARMIL1Q5VZK9 1371 aa21.98■■□□□ 1.11
RACK1-202ENST00000502548 JPH4Q96JJ6 628 aa21.93■■□□□ 1.1
RACK1-202ENST00000502548 CEP170Q5SW79 1584 aa21.91■■□□□ 1.1
RACK1-202ENST00000502548 ARAP1Q96P48 1450 aa21.9■■□□□ 1.1
RACK1-202ENST00000502548 RUSC2Q8N2Y8 1516 aa21.87■■□□□ 1.09
RACK1-202ENST00000502548 CUL7Q14999 1698 aa21.82■■□□□ 1.08
RACK1-202ENST00000502548 KIAA0586Q9BVV6 1533 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms