RNA–Protein interactions for RNA: ENST00000637937.1

CTSD-214, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-214ENST00000637937 NISCHQ9Y2I1 1504 aa41.6■■■■■ 4.25
CTSD-214ENST00000637937 CCDC180Q9P1Z9 1646 aa37.03■■■■□ 3.52
CTSD-214ENST00000637937 ABCC9O60706 1549 aa36.77■■■■□ 3.48
CTSD-214ENST00000637937 DCAF8L2P0C7V8 631 aa35.15■■■■□ 3.22
CTSD-214ENST00000637937 RB1CC1Q8TDY2 1594 aa35.13■■■■□ 3.21
CTSD-214ENST00000637937 NACADO15069 1562 aa34.99■■■■□ 3.19
CTSD-214ENST00000637937 MYO15BQ96JP2 1530 aa34.61■■■■□ 3.13
CTSD-214ENST00000637937 ZCCHC6Q5VYS8 1495 aaKnown RBP34.55■■■■□ 3.12
CTSD-214ENST00000637937 PABPN1Q86U42 306 aaKnown RBP eCLIP34.39■■■■□ 3.11e-12■□□□□ 10
CTSD-214ENST00000637937 DCAF1Q9Y4B6 1507 aa34.34■■■■□ 3.09
CTSD-214ENST00000637937 UNC13AQ9UPW8 1703 aa34.21■■■■□ 3.07
CTSD-214ENST00000637937 DNAJC5BQ9UF47 199 aa34.11■■■■□ 3.05
CTSD-214ENST00000637937 BICRAQ9NZM4 1560 aa34.04■■■■□ 3.04
CTSD-214ENST00000637937 SCRIBQ14160 1630 aa33.88■■■■□ 3.01
CTSD-214ENST00000637937 SHROOM4Q9ULL8 1493 aa33.63■■■□□ 2.97
CTSD-214ENST00000637937 EIF4G1Q04637 1599 aaKnown RBP33.21■■■□□ 2.91
CTSD-214ENST00000637937 CC2D2AQ9P2K1 1620 aa33.17■■■□□ 2.9
CTSD-214ENST00000637937 CECR2Q9BXF3 1484 aa33.07■■■□□ 2.88
CTSD-214ENST00000637937 SMARCA4P51532 1647 aa32.33■■■□□ 2.77
CTSD-214ENST00000637937 NCAPD3P42695 1498 aa32.32■■■□□ 2.76
CTSD-214ENST00000637937 ATAD2BQ9ULI0 1458 aa32.29■■■□□ 2.76
CTSD-214ENST00000637937 BAZ1AQ9NRL2 1556 aaPredicted RBP32.26■■■□□ 2.75
CTSD-214ENST00000637937 SMARCA2P51531 1590 aa32.21■■■□□ 2.75
CTSD-214ENST00000637937 HMGXB3Q12766 1538 aa32.07■■■□□ 2.72
CTSD-214ENST00000637937 MROH2BQ7Z745 1585 aa32.07■■■□□ 2.72
CTSD-214ENST00000637937 BAZ1BQ9UIG0 1483 aaKnown RBP32.03■■■□□ 2.72
CTSD-214ENST00000637937 PEG3Q9GZU2 1588 aa31.98■■■□□ 2.71
CTSD-214ENST00000637937 ERCC6Q03468 1493 aa31.75■■■□□ 2.67
CTSD-214ENST00000637937 NESP48681 1621 aa31.69■■■□□ 2.66
CTSD-214ENST00000637937 WIZO95785 1651 aa31.67■■■□□ 2.66
CTSD-214ENST00000637937 RSF1Q96T23 1441 aaPredicted RBP31.59■■■□□ 2.65
CTSD-214ENST00000637937 LAMC3Q9Y6N6 1575 aa31.49■■■□□ 2.63
CTSD-214ENST00000637937 CUX2O14529 1486 aa31.46■■■□□ 2.63
CTSD-214ENST00000637937 CADPSQ9ULU8 1353 aa31.41■■■□□ 2.62
CTSD-214ENST00000637937 PDS5BQ9NTI5 1447 aa31.38■■■□□ 2.61
CTSD-214ENST00000637937 TOP2AP11388 1531 aaKnown RBP31.32■■■□□ 2.6
CTSD-214ENST00000637937 KIF21AQ7Z4S6 1674 aa31.21■■■□□ 2.59
CTSD-214ENST00000637937 THOC2Q8NI27 1593 aaKnown RBP31.19■■■□□ 2.58
CTSD-214ENST00000637937 CFTRP13569 1480 aa31.1■■■□□ 2.57
CTSD-214ENST00000637937 MRC2Q9UBG0 1479 aa31.04■■■□□ 2.56
CTSD-214ENST00000637937 FANCD2Q9BXW9 1451 aa31.03■■■□□ 2.56
CTSD-214ENST00000637937 CEP164Q9UPV0 1460 aa31.02■■■□□ 2.56
CTSD-214ENST00000637937 DNAJC5Q9H3Z4 198 aa31.01■■■□□ 2.55
CTSD-214ENST00000637937 CCDC88BA6NC98 1476 aa31.01■■■□□ 2.55
CTSD-214ENST00000637937 WDR62O43379 1518 aa30.91■■■□□ 2.54
CTSD-214ENST00000637937 URB2Q14146 1524 aaKnown RBP30.72■■■□□ 2.51
CTSD-214ENST00000637937 PRDM2Q13029 1718 aa30.67■■■□□ 2.5
CTSD-214ENST00000637937 SUPT5HO00267 1087 aaKnown RBP30.67■■■□□ 2.5
CTSD-214ENST00000637937 TOPBP1Q92547 1522 aa30.47■■■□□ 2.47
CTSD-214ENST00000637937 ABCC8Q09428 1581 aa30.45■■■□□ 2.46
CTSD-214ENST00000637937 IFT140Q96RY7 1462 aa30.38■■■□□ 2.45
CTSD-214ENST00000637937 DNMBPQ6XZF7 1577 aa30.37■■■□□ 2.45
CTSD-214ENST00000637937 ZNF608Q9ULD9 1512 aaPredicted RBP30.29■■■□□ 2.44
CTSD-214ENST00000637937 OSCARQ8IYS5 282 aa30.21■■■□□ 2.43
CTSD-214ENST00000637937 POLA1P09884 1462 aaPredicted RBP30.19■■■□□ 2.42
CTSD-214ENST00000637937 SOGA1O94964 1423 aa30.12■■■□□ 2.41
CTSD-214ENST00000637937 TARBP1Q13395 1621 aaKnown RBP30.11■■■□□ 2.41
CTSD-214ENST00000637937 AQRO60306 1485 aaKnown RBP eCLIP30.11■■■□□ 2.413e-6■■■■□ 22.1
CTSD-214ENST00000637937 RAD54L2Q9Y4B4 1467 aa30.11■■■□□ 2.41
CTSD-214ENST00000637937 CUX1P39880 1505 aa30.1■■■□□ 2.41
CTSD-214ENST00000637937 EIF4G3O43432 1585 aaKnown RBP30.09■■■□□ 2.41
CTSD-214ENST00000637937 FGD5Q6ZNL6 1462 aa30.07■■■□□ 2.4
CTSD-214ENST00000637937 TDRD9Q8NDG6 1382 aaKnown RBP30.02■■■□□ 2.4
CTSD-214ENST00000637937 FBLN2P98095 1184 aa29.93■■■□□ 2.38
CTSD-214ENST00000637937 TRIM41Q8WV44 630 aa29.93■■■□□ 2.38
CTSD-214ENST00000637937 WDR97A6NE52 1622 aa29.82■■■□□ 2.36
CTSD-214ENST00000637937 WRNQ14191 1432 aaPredicted RBP eCLIP29.81■■■□□ 2.36
CTSD-214ENST00000637937 SNAPC4Q5SXM2 1469 aa29.79■■■□□ 2.36
CTSD-214ENST00000637937 GRIN2BQ13224 1484 aa29.78■■■□□ 2.36
CTSD-214ENST00000637937 CHD1O14646 1710 aa29.75■■■□□ 2.35
CTSD-214ENST00000637937 CHMP7Q8WUX9 453 aaPredicted RBP29.75■■■□□ 2.35
CTSD-214ENST00000637937 ABCA10Q8WWZ4 1543 aa29.74■■■□□ 2.35
CTSD-214ENST00000637937 GAPVD1Q14C86 1478 aa29.74■■■□□ 2.35
CTSD-214ENST00000637937 TOP2BQ02880 1626 aa29.71■■■□□ 2.35
CTSD-214ENST00000637937 SYNJ1O43426 1573 aa29.7■■■□□ 2.35
CTSD-214ENST00000637937 MAGI1Q96QZ7 1491 aaPredicted RBP29.7■■■□□ 2.35
CTSD-214ENST00000637937 BIVM-ERCC5R4GMW8 1640 aa29.67■■■□□ 2.34
CTSD-214ENST00000637937 RIMBP3CA6NJZ7 1639 aa29.63■■■□□ 2.33
CTSD-214ENST00000637937 RIMBP3BA6NNM3 1639 aa29.63■■■□□ 2.33
CTSD-214ENST00000637937 RIMBP3Q9UFD9 1639 aa29.63■■■□□ 2.33
CTSD-214ENST00000637937 ARHGEF11O15085 1522 aa29.62■■■□□ 2.33
CTSD-214ENST00000637937 SYNJ2O15056 1496 aa29.61■■■□□ 2.33
CTSD-214ENST00000637937 ABCA5Q8WWZ7 1642 aa29.6■■■□□ 2.33
CTSD-214ENST00000637937 PBRM1Q86U86 1689 aa29.59■■■□□ 2.33
CTSD-214ENST00000637937 CYB5RLQ6IPT4 315 aa29.5■■■□□ 2.31
CTSD-214ENST00000637937 CLASP1Q7Z460 1538 aa29.45■■■□□ 2.3
CTSD-214ENST00000637937 FHAD1B1AJZ9 1412 aa29.37■■■□□ 2.29
CTSD-214ENST00000637937 GRIN2AQ12879 1464 aa29.37■■■□□ 2.29
CTSD-214ENST00000637937 ADAMTS12P58397 1594 aa29.37■■■□□ 2.29
CTSD-214ENST00000637937 ERICH3Q5RHP9 1530 aa29.36■■■□□ 2.29
CTSD-214ENST00000637937 ARAP1Q96P48 1450 aa29.36■■■□□ 2.29
CTSD-214ENST00000637937 NUP160Q12769 1436 aa29.24■■■□□ 2.27
CTSD-214ENST00000637937 KIF27Q86VH2 1401 aa29.24■■■□□ 2.27
CTSD-214ENST00000637937 CEP170Q5SW79 1584 aa29.22■■■□□ 2.27
CTSD-214ENST00000637937 IGF1RP08069 1367 aa29.16■■■□□ 2.26
CTSD-214ENST00000637937 TRHP20396 242 aaPredicted RBP29.06■■■□□ 2.24
CTSD-214ENST00000637937 ERCC6L2Q5T890 1561 aa29.05■■■□□ 2.24
CTSD-214ENST00000637937 JPH4Q96JJ6 628 aa29.04■■■□□ 2.24
CTSD-214ENST00000637937 CUL7Q14999 1698 aa29■■■□□ 2.23
CTSD-214ENST00000637937 CARMIL1Q5VZK9 1371 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms