RNA–Protein interactions for RNA: ENST00000508963.1

RACK1-220, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-220ENST00000508963 NISCHQ9Y2I1 1504 aa14.82□□□□□ -0.04
RACK1-220ENST00000508963 CCDC180Q9P1Z9 1646 aa12.95□□□□□ -0.34
RACK1-220ENST00000508963 ABCC9O60706 1549 aa12.49□□□□□ -0.41
RACK1-220ENST00000508963 ZCCHC6Q5VYS8 1495 aaKnown RBP12.37□□□□□ -0.43
RACK1-220ENST00000508963 DCAF8L2P0C7V8 631 aa12.28□□□□□ -0.44
RACK1-220ENST00000508963 DCAF1Q9Y4B6 1507 aa12.27□□□□□ -0.45
RACK1-220ENST00000508963 MYO15BQ96JP2 1530 aa12.23□□□□□ -0.45
RACK1-220ENST00000508963 NACADO15069 1562 aa12.18□□□□□ -0.46
RACK1-220ENST00000508963 RB1CC1Q8TDY2 1594 aa12.09□□□□□ -0.47
RACK1-220ENST00000508963 SCRIBQ14160 1630 aa11.85□□□□□ -0.51
RACK1-220ENST00000508963 SHROOM4Q9ULL8 1493 aa11.84□□□□□ -0.51
RACK1-220ENST00000508963 UNC13AQ9UPW8 1703 aa11.8□□□□□ -0.52
RACK1-220ENST00000508963 BICRAQ9NZM4 1560 aa11.79□□□□□ -0.52
RACK1-220ENST00000508963 PABPN1Q86U42 306 aaKnown RBP eCLIP11.79□□□□□ -0.52
RACK1-220ENST00000508963 CECR2Q9BXF3 1484 aa11.54□□□□□ -0.56
RACK1-220ENST00000508963 MROH2BQ7Z745 1585 aa11.43□□□□□ -0.58
RACK1-220ENST00000508963 RSF1Q96T23 1441 aaPredicted RBP11.43□□□□□ -0.58
RACK1-220ENST00000508963 EIF4G1Q04637 1599 aaKnown RBP11.41□□□□□ -0.58
RACK1-220ENST00000508963 BAZ1AQ9NRL2 1556 aaPredicted RBP11.41□□□□□ -0.58
RACK1-220ENST00000508963 DNAJC5BQ9UF47 199 aa11.39□□□□□ -0.59
RACK1-220ENST00000508963 SMARCA4P51532 1647 aa11.38□□□□□ -0.59
RACK1-220ENST00000508963 ATAD2BQ9ULI0 1458 aa11.32□□□□□ -0.6
RACK1-220ENST00000508963 SUPT5HO00267 1087 aaKnown RBP11.31□□□□□ -0.6
RACK1-220ENST00000508963 PEG3Q9GZU2 1588 aa11.31□□□□□ -0.6
RACK1-220ENST00000508963 CC2D2AQ9P2K1 1620 aa11.3□□□□□ -0.6
RACK1-220ENST00000508963 NCAPD3P42695 1498 aa11.3□□□□□ -0.6
RACK1-220ENST00000508963 WIZO95785 1651 aa11.27□□□□□ -0.6
RACK1-220ENST00000508963 SMARCA2P51531 1590 aa11.26□□□□□ -0.61
RACK1-220ENST00000508963 HMGXB3Q12766 1538 aa11.19□□□□□ -0.62
RACK1-220ENST00000508963 BAZ1BQ9UIG0 1483 aaKnown RBP11.18□□□□□ -0.62
RACK1-220ENST00000508963 TOP2AP11388 1531 aaKnown RBP11.16□□□□□ -0.62
RACK1-220ENST00000508963 CCDC88BA6NC98 1476 aa11.1□□□□□ -0.63
RACK1-220ENST00000508963 CADPSQ9ULU8 1353 aa10.98□□□□□ -0.65
RACK1-220ENST00000508963 CFTRP13569 1480 aa10.95□□□□□ -0.66
RACK1-220ENST00000508963 NESP48681 1621 aa10.91□□□□□ -0.66
RACK1-220ENST00000508963 LAMC3Q9Y6N6 1575 aa10.87□□□□□ -0.67
RACK1-220ENST00000508963 PDS5BQ9NTI5 1447 aa10.83□□□□□ -0.68
RACK1-220ENST00000508963 FANCD2Q9BXW9 1451 aa10.81□□□□□ -0.68
RACK1-220ENST00000508963 CHIC1Q5VXU3 224 aa10.77□□□□□ -0.69
RACK1-220ENST00000508963 PRDM2Q13029 1718 aa10.73□□□□□ -0.69
RACK1-220ENST00000508963 CEP164Q9UPV0 1460 aa10.73□□□□□ -0.69
RACK1-220ENST00000508963 ABCC8Q09428 1581 aa10.71□□□□□ -0.69
RACK1-220ENST00000508963 WRNQ14191 1432 aaPredicted RBP eCLIP10.71□□□□□ -0.69
RACK1-220ENST00000508963 KIF21AQ7Z4S6 1674 aa10.7□□□□□ -0.7
RACK1-220ENST00000508963 URB2Q14146 1524 aaKnown RBP10.7□□□□□ -0.7
RACK1-220ENST00000508963 ERCC6Q03468 1493 aa10.69□□□□□ -0.7
RACK1-220ENST00000508963 CUX1P39880 1505 aa10.68□□□□□ -0.7
RACK1-220ENST00000508963 MRC2Q9UBG0 1479 aa10.68□□□□□ -0.7
RACK1-220ENST00000508963 TRIM41Q8WV44 630 aa10.67□□□□□ -0.7
RACK1-220ENST00000508963 TOPBP1Q92547 1522 aa10.66□□□□□ -0.7
RACK1-220ENST00000508963 SYNJ1O43426 1573 aa10.65□□□□□ -0.71
RACK1-220ENST00000508963 TOP2BQ02880 1626 aa10.64□□□□□ -0.71
RACK1-220ENST00000508963 DNMBPQ6XZF7 1577 aa10.64□□□□□ -0.71
RACK1-220ENST00000508963 WDR62O43379 1518 aa10.63□□□□□ -0.71
RACK1-220ENST00000508963 THOC2Q8NI27 1593 aaKnown RBP10.63□□□□□ -0.71
RACK1-220ENST00000508963 BIVM-ERCC5R4GMW8 1640 aa10.61□□□□□ -0.71
RACK1-220ENST00000508963 CUX2O14529 1486 aa10.6□□□□□ -0.71
RACK1-220ENST00000508963 POLA1P09884 1462 aaPredicted RBP10.59□□□□□ -0.71
RACK1-220ENST00000508963 FGD5Q6ZNL6 1462 aa10.59□□□□□ -0.71
RACK1-220ENST00000508963 SOGA1O94964 1423 aa10.58□□□□□ -0.72
RACK1-220ENST00000508963 RAD54L2Q9Y4B4 1467 aa10.56□□□□□ -0.72
RACK1-220ENST00000508963 TARBP1Q13395 1621 aaKnown RBP10.52□□□□□ -0.73
RACK1-220ENST00000508963 IFT140Q96RY7 1462 aa10.52□□□□□ -0.73
RACK1-220ENST00000508963 ABCA10Q8WWZ4 1543 aa10.52□□□□□ -0.73
RACK1-220ENST00000508963 RUSC2Q8N2Y8 1516 aa10.51□□□□□ -0.73
RACK1-220ENST00000508963 TDRD9Q8NDG6 1382 aaKnown RBP10.51□□□□□ -0.73
RACK1-220ENST00000508963 ZNF608Q9ULD9 1512 aaPredicted RBP10.48□□□□□ -0.73
RACK1-220ENST00000508963 IGF1RP08069 1367 aa10.48□□□□□ -0.73
RACK1-220ENST00000508963 AQRO60306 1485 aaKnown RBP eCLIP10.48□□□□□ -0.737e-32■■■■■ 82.2
RACK1-220ENST00000508963 CSRNP3Q8WYN3 585 aa10.46□□□□□ -0.73
RACK1-220ENST00000508963 KIF27Q86VH2 1401 aa10.46□□□□□ -0.74
RACK1-220ENST00000508963 WDR97A6NE52 1622 aa10.44□□□□□ -0.74
RACK1-220ENST00000508963 GAPVD1Q14C86 1478 aa10.43□□□□□ -0.74
RACK1-220ENST00000508963 FAM9AQ8IZU1 332 aaPredicted RBP10.43□□□□□ -0.74
RACK1-220ENST00000508963 EEA1Q15075 1411 aa10.42□□□□□ -0.74
RACK1-220ENST00000508963 ABCA5Q8WWZ7 1642 aa10.41□□□□□ -0.74
RACK1-220ENST00000508963 GRIN2BQ13224 1484 aa10.39□□□□□ -0.75
RACK1-220ENST00000508963 ERICH3Q5RHP9 1530 aa10.38□□□□□ -0.75
RACK1-220ENST00000508963 PRXQ9BXM0 1461 aa10.37□□□□□ -0.75
RACK1-220ENST00000508963 EIF4G3O43432 1585 aaKnown RBP10.37□□□□□ -0.75
RACK1-220ENST00000508963 CARMIL1Q5VZK9 1371 aa10.37□□□□□ -0.75
RACK1-220ENST00000508963 LOC105371045A0A1W2PR82 267 aa10.34□□□□□ -0.75
RACK1-220ENST00000508963 FHAD1B1AJZ9 1412 aa10.33□□□□□ -0.76
RACK1-220ENST00000508963 SNAPC4Q5SXM2 1469 aa10.32□□□□□ -0.76
RACK1-220ENST00000508963 MAGI1Q96QZ7 1491 aaPredicted RBP10.32□□□□□ -0.76
RACK1-220ENST00000508963 RAPGEF2Q9Y4G8 1499 aa10.3□□□□□ -0.76
RACK1-220ENST00000508963 CHMP7Q8WUX9 453 aaPredicted RBP10.3□□□□□ -0.76
RACK1-220ENST00000508963 PBRM1Q86U86 1689 aa10.3□□□□□ -0.76
RACK1-220ENST00000508963 SYNJ2O15056 1496 aa10.3□□□□□ -0.76
RACK1-220ENST00000508963 CUL7Q14999 1698 aa10.28□□□□□ -0.76
RACK1-220ENST00000508963 ADAMTS12P58397 1594 aa10.27□□□□□ -0.76
RACK1-220ENST00000508963 KIF21BO75037 1637 aa10.27□□□□□ -0.77
RACK1-220ENST00000508963 FBLN2P98095 1184 aa10.26□□□□□ -0.77
RACK1-220ENST00000508963 GRIN2AQ12879 1464 aa10.25□□□□□ -0.77
RACK1-220ENST00000508963 EHMT2Q96KQ7 1210 aa10.25□□□□□ -0.77
RACK1-220ENST00000508963 GOLGA3Q08378 1498 aa10.23□□□□□ -0.77
RACK1-220ENST00000508963 UBTFP17480 764 aaKnown RBP10.23□□□□□ -0.77
RACK1-220ENST00000508963 TNIKQ9UKE5 1360 aa10.23□□□□□ -0.77
RACK1-220ENST00000508963 NUP160Q12769 1436 aa10.23□□□□□ -0.77
RACK1-220ENST00000508963 OSCARQ8IYS5 282 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms