RNA–Protein interactions for RNA: ENST00000504325.5

RACK1-210, Transcript of receptor for activated C kinase 1, humanhuman

TSL 1 (best)

Gene RACK1, Length 1,098 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-210ENST00000504325 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
RACK1-210ENST00000504325 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
RACK1-210ENST00000504325 ABCC9O60706 1549 aa19.15■□□□□ 0.66
RACK1-210ENST00000504325 DCAF8L2P0C7V8 631 aa18.64■□□□□ 0.57
RACK1-210ENST00000504325 ZCCHC6Q5VYS8 1495 aaKnown RBP18.62■□□□□ 0.57
RACK1-210ENST00000504325 NACADO15069 1562 aa18.53■□□□□ 0.56
RACK1-210ENST00000504325 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
RACK1-210ENST00000504325 RB1CC1Q8TDY2 1594 aa18.48■□□□□ 0.55
RACK1-210ENST00000504325 DCAF1Q9Y4B6 1507 aa18.48■□□□□ 0.55
RACK1-210ENST00000504325 SCRIBQ14160 1630 aa17.99■□□□□ 0.47
RACK1-210ENST00000504325 UNC13AQ9UPW8 1703 aa17.97■□□□□ 0.47
RACK1-210ENST00000504325 PABPN1Q86U42 306 aaKnown RBP eCLIP17.96■□□□□ 0.47
RACK1-210ENST00000504325 BICRAQ9NZM4 1560 aa17.9■□□□□ 0.46
RACK1-210ENST00000504325 SHROOM4Q9ULL8 1493 aa17.77■□□□□ 0.44
RACK1-210ENST00000504325 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
RACK1-210ENST00000504325 EIF4G1Q04637 1599 aaKnown RBP17.42■□□□□ 0.38
RACK1-210ENST00000504325 CECR2Q9BXF3 1484 aa17.37■□□□□ 0.37
RACK1-210ENST00000504325 CC2D2AQ9P2K1 1620 aa17.29■□□□□ 0.36
RACK1-210ENST00000504325 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
RACK1-210ENST00000504325 SMARCA4P51532 1647 aa17.24■□□□□ 0.35
RACK1-210ENST00000504325 MROH2BQ7Z745 1585 aa17.19■□□□□ 0.34
RACK1-210ENST00000504325 ATAD2BQ9ULI0 1458 aa17.15■□□□□ 0.34
RACK1-210ENST00000504325 NCAPD3P42695 1498 aa17.12■□□□□ 0.33
RACK1-210ENST00000504325 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
RACK1-210ENST00000504325 RSF1Q96T23 1441 aaPredicted RBP17.1■□□□□ 0.33
RACK1-210ENST00000504325 PEG3Q9GZU2 1588 aa17.09■□□□□ 0.33
RACK1-210ENST00000504325 HMGXB3Q12766 1538 aa17.01■□□□□ 0.31
RACK1-210ENST00000504325 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
RACK1-210ENST00000504325 WIZO95785 1651 aa16.98■□□□□ 0.31
RACK1-210ENST00000504325 SUPT5HO00267 1087 aaKnown RBP16.85■□□□□ 0.29
RACK1-210ENST00000504325 TOP2AP11388 1531 aaKnown RBP16.84■□□□□ 0.29
RACK1-210ENST00000504325 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
RACK1-210ENST00000504325 CADPSQ9ULU8 1353 aa16.64■□□□□ 0.26
RACK1-210ENST00000504325 NESP48681 1621 aa16.61■□□□□ 0.25
RACK1-210ENST00000504325 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
RACK1-210ENST00000504325 CFTRP13569 1480 aa16.56■□□□□ 0.24
RACK1-210ENST00000504325 PDS5BQ9NTI5 1447 aa16.53■□□□□ 0.24
RACK1-210ENST00000504325 ERCC6Q03468 1493 aa16.49■□□□□ 0.23
RACK1-210ENST00000504325 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
RACK1-210ENST00000504325 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
RACK1-210ENST00000504325 KIF21AQ7Z4S6 1674 aa16.36■□□□□ 0.21
RACK1-210ENST00000504325 PRDM2Q13029 1718 aa16.33■□□□□ 0.21
RACK1-210ENST00000504325 MRC2Q9UBG0 1479 aa16.31■□□□□ 0.2
RACK1-210ENST00000504325 THOC2Q8NI27 1593 aaKnown RBP16.27■□□□□ 0.2
RACK1-210ENST00000504325 CUX2O14529 1486 aa16.24■□□□□ 0.19
RACK1-210ENST00000504325 WDR62O43379 1518 aa16.24■□□□□ 0.19
RACK1-210ENST00000504325 URB2Q14146 1524 aaKnown RBP16.23■□□□□ 0.19
RACK1-210ENST00000504325 ABCC8Q09428 1581 aa16.21■□□□□ 0.19
RACK1-210ENST00000504325 TOPBP1Q92547 1522 aa16.18■□□□□ 0.18
RACK1-210ENST00000504325 DNMBPQ6XZF7 1577 aa16.16■□□□□ 0.18
RACK1-210ENST00000504325 WRNQ14191 1432 aaPredicted RBP eCLIP16.12■□□□□ 0.17
RACK1-210ENST00000504325 CUX1P39880 1505 aa16.11■□□□□ 0.17
RACK1-210ENST00000504325 POLA1P09884 1462 aaPredicted RBP16.05■□□□□ 0.16
RACK1-210ENST00000504325 IFT140Q96RY7 1462 aa16.04■□□□□ 0.16
RACK1-210ENST00000504325 FGD5Q6ZNL6 1462 aa16.03■□□□□ 0.16
RACK1-210ENST00000504325 SOGA1O94964 1423 aa16.02■□□□□ 0.16
RACK1-210ENST00000504325 TOP2BQ02880 1626 aa16.02■□□□□ 0.16
RACK1-210ENST00000504325 SYNJ1O43426 1573 aa16.01■□□□□ 0.15
RACK1-210ENST00000504325 BIVM-ERCC5R4GMW8 1640 aa15.99■□□□□ 0.15
RACK1-210ENST00000504325 RAD54L2Q9Y4B4 1467 aa15.98■□□□□ 0.15
RACK1-210ENST00000504325 TARBP1Q13395 1621 aaKnown RBP15.95■□□□□ 0.14
RACK1-210ENST00000504325 ZNF608Q9ULD9 1512 aaPredicted RBP15.93■□□□□ 0.14
RACK1-210ENST00000504325 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
RACK1-210ENST00000504325 TDRD9Q8NDG6 1382 aaKnown RBP15.91■□□□□ 0.14
RACK1-210ENST00000504325 ABCA10Q8WWZ4 1543 aa15.9■□□□□ 0.14
RACK1-210ENST00000504325 AQRO60306 1485 aaKnown RBP eCLIP15.89■□□□□ 0.133e-10■■■■■ 58.2
RACK1-210ENST00000504325 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
RACK1-210ENST00000504325 WDR97A6NE52 1622 aa15.85■□□□□ 0.13
RACK1-210ENST00000504325 EIF4G3O43432 1585 aaKnown RBP15.83■□□□□ 0.13
RACK1-210ENST00000504325 GAPVD1Q14C86 1478 aa15.82■□□□□ 0.12
RACK1-210ENST00000504325 GRIN2BQ13224 1484 aa15.8■□□□□ 0.12
RACK1-210ENST00000504325 KIF27Q86VH2 1401 aa15.78■□□□□ 0.12
RACK1-210ENST00000504325 ABCA5Q8WWZ7 1642 aa15.78■□□□□ 0.12
RACK1-210ENST00000504325 SNAPC4Q5SXM2 1469 aa15.72■□□□□ 0.11
RACK1-210ENST00000504325 MAGI1Q96QZ7 1491 aaPredicted RBP15.72■□□□□ 0.11
RACK1-210ENST00000504325 ERICH3Q5RHP9 1530 aa15.71■□□□□ 0.11
RACK1-210ENST00000504325 IGF1RP08069 1367 aa15.71■□□□□ 0.11
RACK1-210ENST00000504325 FBLN2P98095 1184 aa15.7■□□□□ 0.1
RACK1-210ENST00000504325 CHMP7Q8WUX9 453 aaPredicted RBP15.7■□□□□ 0.1
RACK1-210ENST00000504325 PBRM1Q86U86 1689 aa15.68■□□□□ 0.1
RACK1-210ENST00000504325 SYNJ2O15056 1496 aa15.67■□□□□ 0.1
RACK1-210ENST00000504325 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
RACK1-210ENST00000504325 RUSC2Q8N2Y8 1516 aa15.66■□□□□ 0.1
RACK1-210ENST00000504325 FHAD1B1AJZ9 1412 aa15.66■□□□□ 0.1
RACK1-210ENST00000504325 EEA1Q15075 1411 aa15.61■□□□□ 0.09
RACK1-210ENST00000504325 ADAMTS12P58397 1594 aa15.61■□□□□ 0.09
RACK1-210ENST00000504325 CARMIL1Q5VZK9 1371 aa15.61■□□□□ 0.09
RACK1-210ENST00000504325 CSRNP3Q8WYN3 585 aa15.6■□□□□ 0.09
RACK1-210ENST00000504325 GRIN2AQ12879 1464 aa15.58■□□□□ 0.08
RACK1-210ENST00000504325 CUL7Q14999 1698 aa15.57■□□□□ 0.08
RACK1-210ENST00000504325 FAM9AQ8IZU1 332 aaPredicted RBP15.57■□□□□ 0.08
RACK1-210ENST00000504325 DNAJC5Q9H3Z4 198 aa15.57■□□□□ 0.08
RACK1-210ENST00000504325 CHD1O14646 1710 aa15.57■□□□□ 0.08
RACK1-210ENST00000504325 RAPGEF2Q9Y4G8 1499 aa15.52■□□□□ 0.08
RACK1-210ENST00000504325 PRXQ9BXM0 1461 aa15.52■□□□□ 0.07
RACK1-210ENST00000504325 NUP160Q12769 1436 aa15.51■□□□□ 0.07
RACK1-210ENST00000504325 CEP170Q5SW79 1584 aa15.46■□□□□ 0.07
RACK1-210ENST00000504325 CLASP1Q7Z460 1538 aa15.45■□□□□ 0.06
RACK1-210ENST00000504325 KIAA0586Q9BVV6 1533 aa15.43■□□□□ 0.06
RACK1-210ENST00000504325 JPH4Q96JJ6 628 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms