RNA–Protein interactions for RNA: ENST00000253686.6

MRPS25-201, Transcript of mitochondrial ribosomal protein S25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS25, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS25-201ENST00000253686 NISCHQ9Y2I1 1504 aa21.76■■□□□ 1.07
MRPS25-201ENST00000253686 DCAF8L2P0C7V8 631 aa20.78■□□□□ 0.92
MRPS25-201ENST00000253686 SHROOM4Q9ULL8 1493 aa19.17■□□□□ 0.66
MRPS25-201ENST00000253686 ABCC9O60706 1549 aa19.14■□□□□ 0.65
MRPS25-201ENST00000253686 SUPT5HO00267 1087 aaKnown RBP18.87■□□□□ 0.61
MRPS25-201ENST00000253686 PELP1Q8IZL8 1130 aaKnown RBP18.83■□□□□ 0.61
MRPS25-201ENST00000253686 MYT1Q01538 1121 aa18.72■□□□□ 0.59
MRPS25-201ENST00000253686 CCDC180Q9P1Z9 1646 aa18.54■□□□□ 0.56
MRPS25-201ENST00000253686 PABPN1Q86U42 306 aaKnown RBP eCLIP18.5■□□□□ 0.55
MRPS25-201ENST00000253686 RB1CC1Q8TDY2 1594 aa18.07■□□□□ 0.48
MRPS25-201ENST00000253686 ZCCHC6Q5VYS8 1495 aaKnown RBP17.99■□□□□ 0.47
MRPS25-201ENST00000253686 NACADO15069 1562 aa17.92■□□□□ 0.46
MRPS25-201ENST00000253686 SCRIBQ14160 1630 aa17.88■□□□□ 0.45
MRPS25-201ENST00000253686 FAM9AQ8IZU1 332 aaPredicted RBP17.86■□□□□ 0.45
MRPS25-201ENST00000253686 EHMT2Q96KQ7 1210 aa17.79■□□□□ 0.44
MRPS25-201ENST00000253686 TRIM41Q8WV44 630 aa17.68■□□□□ 0.42
MRPS25-201ENST00000253686 DCAF1Q9Y4B6 1507 aa17.52■□□□□ 0.4
MRPS25-201ENST00000253686 TTBK1Q5TCY1 1321 aaPredicted RBP17.49■□□□□ 0.39
MRPS25-201ENST00000253686 APLP2Q06481 763 aa17.48■□□□□ 0.39
MRPS25-201ENST00000253686 RANGAP1P46060 587 aaPredicted RBP17.44■□□□□ 0.38
MRPS25-201ENST00000253686 HRCP23327 699 aa17.42■□□□□ 0.38
MRPS25-201ENST00000253686 UBTFP17480 764 aaKnown RBP17.36■□□□□ 0.37
MRPS25-201ENST00000253686 MYO15BQ96JP2 1530 aa17.35■□□□□ 0.37
MRPS25-201ENST00000253686 ATP1B4Q9UN42 357 aaPredicted RBP17.32■□□□□ 0.36
MRPS25-201ENST00000253686 FBLN2P98095 1184 aa17.23■□□□□ 0.35
MRPS25-201ENST00000253686 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
MRPS25-201ENST00000253686 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.35
MRPS25-201ENST00000253686 BAZ1BQ9UIG0 1483 aaKnown RBP17.16■□□□□ 0.34
MRPS25-201ENST00000253686 PCGF6Q9BYE7 350 aa17.1■□□□□ 0.33
MRPS25-201ENST00000253686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
MRPS25-201ENST00000253686 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
MRPS25-201ENST00000253686 BAZ1AQ9NRL2 1556 aaPredicted RBP17.08■□□□□ 0.33
MRPS25-201ENST00000253686 ERCC6Q03468 1493 aa17.06■□□□□ 0.32
MRPS25-201ENST00000253686 CECR2Q9BXF3 1484 aa17.02■□□□□ 0.32
MRPS25-201ENST00000253686 RSF1Q96T23 1441 aaPredicted RBP17■□□□□ 0.31
MRPS25-201ENST00000253686 CHIC1Q5VXU3 224 aa16.94■□□□□ 0.3
MRPS25-201ENST00000253686 SMARCA2P51531 1590 aa16.92■□□□□ 0.3
MRPS25-201ENST00000253686 MYT1LQ9UL68 1186 aa16.87■□□□□ 0.29
MRPS25-201ENST00000253686 CHMP7Q8WUX9 453 aaPredicted RBP16.8■□□□□ 0.28
MRPS25-201ENST00000253686 PDS5BQ9NTI5 1447 aa16.78■□□□□ 0.28
MRPS25-201ENST00000253686 MROH2BQ7Z745 1585 aa16.77■□□□□ 0.28
MRPS25-201ENST00000253686 ERICH6Q7L0X2 663 aa16.77■□□□□ 0.28
MRPS25-201ENST00000253686 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
MRPS25-201ENST00000253686 NPM1P06748 294 aaKnown RBP eCLIP16.7■□□□□ 0.26
MRPS25-201ENST00000253686 CSRNP3Q8WYN3 585 aa16.69■□□□□ 0.26
MRPS25-201ENST00000253686 EIF4G1Q04637 1599 aaKnown RBP16.69■□□□□ 0.26
MRPS25-201ENST00000253686 CADPSQ9ULU8 1353 aa16.63■□□□□ 0.25
MRPS25-201ENST00000253686 SMARCA4P51532 1647 aa16.63■□□□□ 0.25
MRPS25-201ENST00000253686 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
MRPS25-201ENST00000253686 LOC105371045A0A1W2PR82 267 aa16.6■□□□□ 0.25
MRPS25-201ENST00000253686 DNAJC5BQ9UF47 199 aa16.6■□□□□ 0.25
MRPS25-201ENST00000253686 P3H3Q8IVL6 736 aa16.59■□□□□ 0.25
MRPS25-201ENST00000253686 WRNQ14191 1432 aaPredicted RBP eCLIP16.57■□□□□ 0.24
MRPS25-201ENST00000253686 NCAPD3P42695 1498 aa16.55■□□□□ 0.24
MRPS25-201ENST00000253686 CCDC88BA6NC98 1476 aa16.53■□□□□ 0.24
MRPS25-201ENST00000253686 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.24
MRPS25-201ENST00000253686 TRIM26Q12899 539 aaPredicted RBP16.52■□□□□ 0.23
MRPS25-201ENST00000253686 ARID3CA6NKF2 412 aa16.51■□□□□ 0.23
MRPS25-201ENST00000253686 CCER1Q8TC90 406 aaPredicted RBP16.51■□□□□ 0.23
MRPS25-201ENST00000253686 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
MRPS25-201ENST00000253686 WIZO95785 1651 aa16.49■□□□□ 0.23
MRPS25-201ENST00000253686 CDK11AQ9UQ88 783 aaPredicted RBP16.48■□□□□ 0.23
MRPS25-201ENST00000253686 BICRAQ9NZM4 1560 aa16.48■□□□□ 0.23
MRPS25-201ENST00000253686 CEP164Q9UPV0 1460 aa16.46■□□□□ 0.23
MRPS25-201ENST00000253686 ITGAEP38570 1179 aa16.45■□□□□ 0.22
MRPS25-201ENST00000253686 ACIN1Q9UKV3 1341 aaKnown RBP16.43■□□□□ 0.22
MRPS25-201ENST00000253686 KIF27Q86VH2 1401 aa16.43■□□□□ 0.22
MRPS25-201ENST00000253686 SCAF1Q9H7N4 1312 aaKnown RBP16.4■□□□□ 0.22
MRPS25-201ENST00000253686 GTF3C3Q9Y5Q9 886 aa16.39■□□□□ 0.21
MRPS25-201ENST00000253686 FANCD2Q9BXW9 1451 aa16.38■□□□□ 0.21
MRPS25-201ENST00000253686 SOGA1O94964 1423 aa16.37■□□□□ 0.21
MRPS25-201ENST00000253686 TDRD9Q8NDG6 1382 aaKnown RBP16.33■□□□□ 0.2
MRPS25-201ENST00000253686 CUX2O14529 1486 aa16.33■□□□□ 0.2
MRPS25-201ENST00000253686 FAM50AQ14320 339 aaKnown RBP16.3■□□□□ 0.2
MRPS25-201ENST00000253686 ABCC8Q09428 1581 aa16.29■□□□□ 0.2
MRPS25-201ENST00000253686 EEA1Q15075 1411 aa16.27■□□□□ 0.2
MRPS25-201ENST00000253686 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
MRPS25-201ENST00000253686 HMGXB3Q12766 1538 aa16.26■□□□□ 0.19
MRPS25-201ENST00000253686 ZNF777Q9ULD5 760 aaPredicted RBP16.26■□□□□ 0.19
MRPS25-201ENST00000253686 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
MRPS25-201ENST00000253686 ESF1Q9H501 851 aaKnown RBP16.22■□□□□ 0.19
MRPS25-201ENST00000253686 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.19
MRPS25-201ENST00000253686 UNC13AQ9UPW8 1703 aa16.21■□□□□ 0.19
MRPS25-201ENST00000253686 NESP48681 1621 aa16.19■□□□□ 0.18
MRPS25-201ENST00000253686 KCNH8Q96L42 1107 aa16.19■□□□□ 0.18
MRPS25-201ENST00000253686 PLEKHD1A6NEE1 506 aa16.16■□□□□ 0.18
MRPS25-201ENST00000253686 YTHDC1Q96MU7 727 aaKnown RBP16.14■□□□□ 0.18
MRPS25-201ENST00000253686 BCL11AQ9H165 835 aa16.12■□□□□ 0.17
MRPS25-201ENST00000253686 CLSPNQ9HAW4 1339 aa16.11■□□□□ 0.17
MRPS25-201ENST00000253686 MRC2Q9UBG0 1479 aa16.11■□□□□ 0.17
MRPS25-201ENST00000253686 CFTRP13569 1480 aa16.11■□□□□ 0.17
MRPS25-201ENST00000253686 DIEXFQ68CQ4 756 aaKnown RBP16.11■□□□□ 0.17
MRPS25-201ENST00000253686 NEFLP07196 543 aa16.1■□□□□ 0.17
MRPS25-201ENST00000253686 TRIM52Q96A61 297 aa16.1■□□□□ 0.17
MRPS25-201ENST00000253686 CARMIL2Q6F5E8 1435 aa16.09■□□□□ 0.17
MRPS25-201ENST00000253686 GOLGA3Q08378 1498 aa16.08■□□□□ 0.16
MRPS25-201ENST00000253686 MTUS2Q5JR59 1369 aa16.05■□□□□ 0.16
MRPS25-201ENST00000253686 CLIP1P30622 1438 aa16.04■□□□□ 0.16
MRPS25-201ENST00000253686 PLPPR3Q6T4P5 718 aa16.04■□□□□ 0.16
MRPS25-201ENST00000253686 CYB5RLQ6IPT4 315 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms