RNA–Protein interactions for RNA: ENST00000504726.1

RACK1-211, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5 BASIC

Gene RACK1, Length 388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-211ENST00000504726 NISCHQ9Y2I1 1504 aa20.99■□□□□ 0.95
RACK1-211ENST00000504726 CCDC180Q9P1Z9 1646 aa18.66■□□□□ 0.58
RACK1-211ENST00000504726 ABCC9O60706 1549 aa18.06■□□□□ 0.48
RACK1-211ENST00000504726 MYO15BQ96JP2 1530 aa17.63■□□□□ 0.41
RACK1-211ENST00000504726 NACADO15069 1562 aa17.59■□□□□ 0.41
RACK1-211ENST00000504726 RB1CC1Q8TDY2 1594 aa17.55■□□□□ 0.4
RACK1-211ENST00000504726 DCAF1Q9Y4B6 1507 aa17.52■□□□□ 0.39
RACK1-211ENST00000504726 ZCCHC6Q5VYS8 1495 aaKnown RBP17.51■□□□□ 0.39
RACK1-211ENST00000504726 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
RACK1-211ENST00000504726 DCAF8L2P0C7V8 631 aa17.41■□□□□ 0.38
RACK1-211ENST00000504726 SHROOM4Q9ULL8 1493 aa17.05■□□□□ 0.32
RACK1-211ENST00000504726 BICRAQ9NZM4 1560 aa16.87■□□□□ 0.29
RACK1-211ENST00000504726 SCRIBQ14160 1630 aa16.86■□□□□ 0.29
RACK1-211ENST00000504726 PABPN1Q86U42 306 aaKnown RBP eCLIP16.86■□□□□ 0.29
RACK1-211ENST00000504726 UNC13AQ9UPW8 1703 aa16.84■□□□□ 0.29
RACK1-211ENST00000504726 DNAJC5Q9H3Z4 198 aa16.81■□□□□ 0.28
RACK1-211ENST00000504726 EIF4G1Q04637 1599 aaKnown RBP16.49■□□□□ 0.23
RACK1-211ENST00000504726 CC2D2AQ9P2K1 1620 aa16.35■□□□□ 0.21
RACK1-211ENST00000504726 BAZ1AQ9NRL2 1556 aaPredicted RBP16.33■□□□□ 0.2
RACK1-211ENST00000504726 CECR2Q9BXF3 1484 aa16.31■□□□□ 0.2
RACK1-211ENST00000504726 NCAPD3P42695 1498 aa16.24■□□□□ 0.19
RACK1-211ENST00000504726 SMARCA2P51531 1590 aa16.23■□□□□ 0.19
RACK1-211ENST00000504726 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
RACK1-211ENST00000504726 PEG3Q9GZU2 1588 aa16.18■□□□□ 0.18
RACK1-211ENST00000504726 ATAD2BQ9ULI0 1458 aa16.18■□□□□ 0.18
RACK1-211ENST00000504726 HMGXB3Q12766 1538 aa16.15■□□□□ 0.18
RACK1-211ENST00000504726 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
RACK1-211ENST00000504726 BAZ1BQ9UIG0 1483 aaKnown RBP16.06■□□□□ 0.16
RACK1-211ENST00000504726 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
RACK1-211ENST00000504726 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
RACK1-211ENST00000504726 WIZO95785 1651 aa15.83■□□□□ 0.13
RACK1-211ENST00000504726 LAMC3Q9Y6N6 1575 aa15.77■□□□□ 0.11
RACK1-211ENST00000504726 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
RACK1-211ENST00000504726 PDS5BQ9NTI5 1447 aa15.73■□□□□ 0.11
RACK1-211ENST00000504726 ERCC6Q03468 1493 aa15.67■□□□□ 0.1
RACK1-211ENST00000504726 CFTRP13569 1480 aa15.66■□□□□ 0.1
RACK1-211ENST00000504726 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
RACK1-211ENST00000504726 NESP48681 1621 aa15.59■□□□□ 0.09
RACK1-211ENST00000504726 CUX2O14529 1486 aa15.58■□□□□ 0.08
RACK1-211ENST00000504726 SUPT5HO00267 1087 aaKnown RBP15.54■□□□□ 0.08
RACK1-211ENST00000504726 CEP164Q9UPV0 1460 aa15.52■□□□□ 0.07
RACK1-211ENST00000504726 FANCD2Q9BXW9 1451 aa15.51■□□□□ 0.07
RACK1-211ENST00000504726 MRC2Q9UBG0 1479 aa15.48■□□□□ 0.07
RACK1-211ENST00000504726 ABCC8Q09428 1581 aa15.43■□□□□ 0.06
RACK1-211ENST00000504726 THOC2Q8NI27 1593 aaKnown RBP15.41■□□□□ 0.06
RACK1-211ENST00000504726 WDR62O43379 1518 aa15.41■□□□□ 0.06
RACK1-211ENST00000504726 TRIM41Q8WV44 630 aa15.37■□□□□ 0.05
RACK1-211ENST00000504726 KIF21AQ7Z4S6 1674 aa15.37■□□□□ 0.05
RACK1-211ENST00000504726 PRDM2Q13029 1718 aa15.37■□□□□ 0.05
RACK1-211ENST00000504726 URB2Q14146 1524 aaKnown RBP15.28■□□□□ 0.04
RACK1-211ENST00000504726 DNMBPQ6XZF7 1577 aa15.26■□□□□ 0.03
RACK1-211ENST00000504726 TOPBP1Q92547 1522 aa15.24■□□□□ 0.03
RACK1-211ENST00000504726 IFT140Q96RY7 1462 aa15.23■□□□□ 0.03
RACK1-211ENST00000504726 WRNQ14191 1432 aaPredicted RBP eCLIP15.13■□□□□ 0.01
RACK1-211ENST00000504726 WDR97A6NE52 1622 aa15.13■□□□□ 0.01
RACK1-211ENST00000504726 POLA1P09884 1462 aaPredicted RBP15.13■□□□□ 0.01
RACK1-211ENST00000504726 SOGA1O94964 1423 aa15.1■□□□□ 0.01
RACK1-211ENST00000504726 CUX1P39880 1505 aa15.1■□□□□ 0.01
RACK1-211ENST00000504726 FGD5Q6ZNL6 1462 aa15.08■□□□□ 0
RACK1-211ENST00000504726 TOP2BQ02880 1626 aa15.05■□□□□ -0
RACK1-211ENST00000504726 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
RACK1-211ENST00000504726 ABCA10Q8WWZ4 1543 aa15.02□□□□□ -0.01
RACK1-211ENST00000504726 BIVM-ERCC5R4GMW8 1640 aa15.01□□□□□ -0.01
RACK1-211ENST00000504726 ZNF608Q9ULD9 1512 aaPredicted RBP14.97□□□□□ -0.01
RACK1-211ENST00000504726 RAD54L2Q9Y4B4 1467 aa14.97□□□□□ -0.01
RACK1-211ENST00000504726 GRIN2BQ13224 1484 aa14.95□□□□□ -0.02
RACK1-211ENST00000504726 EIF4G3O43432 1585 aaKnown RBP14.94□□□□□ -0.02
RACK1-211ENST00000504726 TDRD9Q8NDG6 1382 aaKnown RBP14.94□□□□□ -0.02
RACK1-211ENST00000504726 MAGI1Q96QZ7 1491 aaPredicted RBP14.94□□□□□ -0.02
RACK1-211ENST00000504726 SYNJ1O43426 1573 aa14.94□□□□□ -0.02
RACK1-211ENST00000504726 AQRO60306 1485 aaKnown RBP eCLIP14.93□□□□□ -0.023e-10■■■■■ 58.2
RACK1-211ENST00000504726 GAPVD1Q14C86 1478 aa14.93□□□□□ -0.02
RACK1-211ENST00000504726 OSCARQ8IYS5 282 aa14.92□□□□□ -0.02
RACK1-211ENST00000504726 KIF27Q86VH2 1401 aa14.87□□□□□ -0.03
RACK1-211ENST00000504726 ABCA5Q8WWZ7 1642 aa14.86□□□□□ -0.03
RACK1-211ENST00000504726 ERICH3Q5RHP9 1530 aa14.86□□□□□ -0.03
RACK1-211ENST00000504726 SYNJ2O15056 1496 aa14.85□□□□□ -0.03
RACK1-211ENST00000504726 CHMP7Q8WUX9 453 aaPredicted RBP14.83□□□□□ -0.04
RACK1-211ENST00000504726 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
RACK1-211ENST00000504726 FHAD1B1AJZ9 1412 aa14.81□□□□□ -0.04
RACK1-211ENST00000504726 FBLN2P98095 1184 aa14.76□□□□□ -0.05
RACK1-211ENST00000504726 PBRM1Q86U86 1689 aa14.73□□□□□ -0.05
RACK1-211ENST00000504726 IGF1RP08069 1367 aa14.73□□□□□ -0.05
RACK1-211ENST00000504726 GRIN2AQ12879 1464 aa14.72□□□□□ -0.05
RACK1-211ENST00000504726 EEA1Q15075 1411 aa14.72□□□□□ -0.05
RACK1-211ENST00000504726 ADAMTS12P58397 1594 aa14.72□□□□□ -0.05
RACK1-211ENST00000504726 AEBP2Q6ZN18 517 aaPredicted RBP14.7□□□□□ -0.06
RACK1-211ENST00000504726 CUL7Q14999 1698 aa14.69□□□□□ -0.06
RACK1-211ENST00000504726 NUP160Q12769 1436 aa14.68□□□□□ -0.06
RACK1-211ENST00000504726 CARMIL1Q5VZK9 1371 aa14.66□□□□□ -0.06
RACK1-211ENST00000504726 CLASP1Q7Z460 1538 aa14.64□□□□□ -0.07
RACK1-211ENST00000504726 CHD1O14646 1710 aa14.63□□□□□ -0.07
RACK1-211ENST00000504726 RAPGEF2Q9Y4G8 1499 aa14.59□□□□□ -0.07
RACK1-211ENST00000504726 CHIC1Q5VXU3 224 aa14.59□□□□□ -0.07
RACK1-211ENST00000504726 KIAA0586Q9BVV6 1533 aa14.59□□□□□ -0.07
RACK1-211ENST00000504726 ARHGEF11O15085 1522 aa14.57□□□□□ -0.08
RACK1-211ENST00000504726 CSRNP3Q8WYN3 585 aa14.56□□□□□ -0.08
RACK1-211ENST00000504726 PRXQ9BXM0 1461 aa14.55□□□□□ -0.08
RACK1-211ENST00000504726 CEP170Q5SW79 1584 aa14.54□□□□□ -0.08
RACK1-211ENST00000504726 ILDR1Q86SU0 546 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms