RNA–Protein interactions for RNA: ENST00000510500.5

CAST-232, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-232ENST00000510500 AEBP2Q6ZN18 517 aaPredicted RBP18.86■□□□□ 0.61
CAST-232ENST00000510500 CHIC1Q5VXU3 224 aa17.63■□□□□ 0.41
CAST-232ENST00000510500 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
CAST-232ENST00000510500 POTEDQ86YR6 584 aa16.15■□□□□ 0.18
CAST-232ENST00000510500 PHF23Q9BUL5 403 aaPredicted RBP15.89■□□□□ 0.13
CAST-232ENST00000510500 SLC24A1O60721 1099 aa15.52■□□□□ 0.08
CAST-232ENST00000510500 FOXD1Q16676 465 aa15.28■□□□□ 0.04
CAST-232ENST00000510500 MSH5O43196 834 aa14.74□□□□□ -0.05
CAST-232ENST00000510500 MYT1Q01538 1121 aa14.66□□□□□ -0.06
CAST-232ENST00000510500 PELP1Q8IZL8 1130 aaKnown RBP14.54□□□□□ -0.08
CAST-232ENST00000510500 TTBK1Q5TCY1 1321 aaPredicted RBP14.43□□□□□ -0.1
CAST-232ENST00000510500 DAXXQ9UER7 740 aaPredicted RBP14.23□□□□□ -0.13
CAST-232ENST00000510500 EHMT2Q96KQ7 1210 aa14.11□□□□□ -0.15
CAST-232ENST00000510500 PIAS4Q8N2W9 510 aaPredicted RBP13.99□□□□□ -0.17
CAST-232ENST00000510500 NCBP3Q53F19 620 aaKnown RBP13.91□□□□□ -0.18
CAST-232ENST00000510500 APLP2Q06481 763 aa13.84□□□□□ -0.19
CAST-232ENST00000510500 ERICH6Q7L0X2 663 aa13.79□□□□□ -0.2
CAST-232ENST00000510500 RTN4Q9NQC3 1192 aaKnown RBP13.79□□□□□ -0.2
CAST-232ENST00000510500 PRKCSHP14314 528 aaPredicted RBP13.78□□□□□ -0.2
CAST-232ENST00000510500 PLPPR3Q6T4P5 718 aa13.77□□□□□ -0.21
CAST-232ENST00000510500 AMER1Q5JTC6 1135 aaPredicted RBP13.64□□□□□ -0.23
CAST-232ENST00000510500 PPP6R1Q9UPN7 881 aa13.45□□□□□ -0.26
CAST-232ENST00000510500 ARXQ96QS3 562 aa13.44□□□□□ -0.26
CAST-232ENST00000510500 ADRA2BP18089 450 aa13.32□□□□□ -0.28
CAST-232ENST00000510500 KCNA4P22459 653 aa13.24□□□□□ -0.29
CAST-232ENST00000510500 CACNB1Q02641 598 aaPredicted RBP13.24□□□□□ -0.29
CAST-232ENST00000510500 CSRNP3Q8WYN3 585 aa13.17□□□□□ -0.3
CAST-232ENST00000510500 TIMELESSQ9UNS1 1208 aa13.07□□□□□ -0.32
CAST-232ENST00000510500 RANGAP1P46060 587 aaPredicted RBP13.06□□□□□ -0.32
CAST-232ENST00000510500 HOMEZQ8IX15 550 aa12.95□□□□□ -0.34
CAST-232ENST00000510500 TAOK2Q9UL54 1235 aa12.91□□□□□ -0.34
CAST-232ENST00000510500 EIF5BO60841 1220 aaKnown RBP12.9□□□□□ -0.34
CAST-232ENST00000510500 TULP1O00294 542 aaPredicted RBP12.88□□□□□ -0.35
CAST-232ENST00000510500 BCL11AQ9H165 835 aa12.86□□□□□ -0.35
CAST-232ENST00000510500 BCANQ96GW7 911 aa12.81□□□□□ -0.36
CAST-232ENST00000510500 DMRT2Q9Y5R5 561 aa12.76□□□□□ -0.37
CAST-232ENST00000510500 TPRNQ4KMQ1 711 aa12.64□□□□□ -0.39
CAST-232ENST00000510500 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
CAST-232ENST00000510500 PODXL2Q9NZ53 605 aa12.6□□□□□ -0.39
CAST-232ENST00000510500 FAM9AQ8IZU1 332 aaPredicted RBP12.59□□□□□ -0.39
CAST-232ENST00000510500 MAPK8IP2Q13387 824 aaPredicted RBP12.55□□□□□ -0.4
CAST-232ENST00000510500 GTF3C3Q9Y5Q9 886 aa12.55□□□□□ -0.4
CAST-232ENST00000510500 PLCB2Q00722 1185 aa12.49□□□□□ -0.41
CAST-232ENST00000510500 RNF39Q9H2S5 420 aa12.46□□□□□ -0.41
CAST-232ENST00000510500 SLC4A1APQ9BWU0 796 aaKnown RBP12.46□□□□□ -0.42
CAST-232ENST00000510500 POTEHQ6S545 545 aa12.44□□□□□ -0.42
CAST-232ENST00000510500 NISCHQ9Y2I1 1504 aa12.44□□□□□ -0.42
CAST-232ENST00000510500 NPM2Q86SE8 214 aaKnown RBP12.38□□□□□ -0.43
CAST-232ENST00000510500 PLEKHG5O94827 1062 aa12.36□□□□□ -0.43
CAST-232ENST00000510500 FBXO3Q9UK99 471 aa12.32□□□□□ -0.44
CAST-232ENST00000510500 HAP1P54257 671 aaPredicted RBP12.31□□□□□ -0.44
CAST-232ENST00000510500 UBE2Q2Q8WVN8 375 aa12.26□□□□□ -0.45
CAST-232ENST00000510500 SCAF1Q9H7N4 1312 aaKnown RBP12.25□□□□□ -0.45
CAST-232ENST00000510500 TMEM132AQ24JP5 1023 aa12.25□□□□□ -0.45
CAST-232ENST00000510500 C1QBPQ07021 282 aaKnown RBP12.24□□□□□ -0.45
CAST-232ENST00000510500 C14orf37Q86TY3 774 aa12.18□□□□□ -0.46
CAST-232ENST00000510500 CENPBP07199 599 aaPredicted RBP12.18□□□□□ -0.46
CAST-232ENST00000510500 DCAF8L1A6NGE4 600 aa12.16□□□□□ -0.46
CAST-232ENST00000510500 VSIG10Q8N0Z9 540 aa12.16□□□□□ -0.46
CAST-232ENST00000510500 HRCP23327 699 aa12.11□□□□□ -0.47
CAST-232ENST00000510500 DCAF8L2P0C7V8 631 aa12.02□□□□□ -0.48
CAST-232ENST00000510500 TRIM26Q12899 539 aaPredicted RBP12.01□□□□□ -0.49
CAST-232ENST00000510500 PDIA4P13667 645 aaKnown RBP11.96□□□□□ -0.49
CAST-232ENST00000510500 ABCC9O60706 1549 aa11.96□□□□□ -0.5
CAST-232ENST00000510500 PKNOX2Q96KN3 472 aa11.9□□□□□ -0.5
CAST-232ENST00000510500 HOXD11P31277 338 aaPredicted RBP11.9□□□□□ -0.5
CAST-232ENST00000510500 LOC105371045A0A1W2PR82 267 aa11.89□□□□□ -0.51
CAST-232ENST00000510500 ZBTB22O15209 634 aa11.88□□□□□ -0.51
CAST-232ENST00000510500 NEFLP07196 543 aa11.87□□□□□ -0.51
CAST-232ENST00000510500 ANP32EQ9BTT0 268 aa11.86□□□□□ -0.51
CAST-232ENST00000510500 KDM2AQ9Y2K7 1162 aa11.86□□□□□ -0.51
CAST-232ENST00000510500 SUPT5HO00267 1087 aaKnown RBP11.84□□□□□ -0.51
CAST-232ENST00000510500 PDE4CQ08493 712 aa11.81□□□□□ -0.52
CAST-232ENST00000510500 UBTFP17480 764 aaKnown RBP11.79□□□□□ -0.52
CAST-232ENST00000510500 DNAJC5BQ9UF47 199 aa11.77□□□□□ -0.52
CAST-232ENST00000510500 FKBP8Q14318 412 aa11.76□□□□□ -0.53
CAST-232ENST00000510500 CDK11AQ9UQ88 783 aaPredicted RBP11.72□□□□□ -0.53
CAST-232ENST00000510500 ANO8Q9HCE9 1232 aaPredicted RBP11.71□□□□□ -0.54
CAST-232ENST00000510500 TAF7LQ5H9L4 462 aa11.7□□□□□ -0.54
CAST-232ENST00000510500 FBLN2P98095 1184 aa11.69□□□□□ -0.54
CAST-232ENST00000510500 CNKSR2Q8WXI2 1034 aa11.68□□□□□ -0.54
CAST-232ENST00000510500 SHROOM4Q9ULL8 1493 aa11.68□□□□□ -0.54
CAST-232ENST00000510500 CDK11BP21127 795 aaKnown RBP11.67□□□□□ -0.54
CAST-232ENST00000510500 CHMP4AQ9BY43 222 aa11.66□□□□□ -0.54
CAST-232ENST00000510500 HMGB1P09429 215 aaKnown RBP11.64□□□□□ -0.55
CAST-232ENST00000510500 BRD2P25440 801 aaKnown RBP11.6□□□□□ -0.55
CAST-232ENST00000510500 FGD1P98174 961 aa11.6□□□□□ -0.55
CAST-232ENST00000510500 SAMD1Q6SPF0 538 aaPredicted RBP11.59□□□□□ -0.55
CAST-232ENST00000510500 ERICH6BQ5W0A0 696 aa11.58□□□□□ -0.56
CAST-232ENST00000510500 ACIN1Q9UKV3 1341 aaKnown RBP11.54□□□□□ -0.56
CAST-232ENST00000510500 HSP90B1P14625 803 aaKnown RBP11.53□□□□□ -0.56
CAST-232ENST00000510500 CCDC180Q9P1Z9 1646 aa11.52□□□□□ -0.56
CAST-232ENST00000510500 RNF216Q9NWF9 866 aaPredicted RBP11.51□□□□□ -0.57
CAST-232ENST00000510500 CCDC9Q9Y3X0 531 aaKnown RBP11.51□□□□□ -0.57
CAST-232ENST00000510500 BCL11BQ9C0K0 894 aaPredicted RBP11.5□□□□□ -0.57
CAST-232ENST00000510500 IGSF3O75054 1194 aa11.45□□□□□ -0.58
CAST-232ENST00000510500 NPM3O75607 178 aaKnown RBP11.45□□□□□ -0.58
CAST-232ENST00000510500 NBR1Q14596 966 aa11.44□□□□□ -0.58
CAST-232ENST00000510500 RSPH4AQ5TD94 716 aa11.42□□□□□ -0.58
CAST-232ENST00000510500 ZNF326Q5BKZ1 582 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms