RNA–Protein interactions for RNA: ENST00000338252.7

CAST-203, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-203ENST00000338252 NISCHQ9Y2I1 1504 aa12.49□□□□□ -0.41
CAST-203ENST00000338252 ABCC9O60706 1549 aa11.92□□□□□ -0.5
CAST-203ENST00000338252 PELP1Q8IZL8 1130 aaKnown RBP11.64□□□□□ -0.55
CAST-203ENST00000338252 DNAJC5BQ9UF47 199 aa11.62□□□□□ -0.55
CAST-203ENST00000338252 HRCP23327 699 aa11.61□□□□□ -0.55
CAST-203ENST00000338252 CCDC180Q9P1Z9 1646 aa11.35□□□□□ -0.59
CAST-203ENST00000338252 PPARGC1BQ86YN6 1023 aaKnown RBP11.29□□□□□ -0.6
CAST-203ENST00000338252 MYT1Q01538 1121 aa11.28□□□□□ -0.6
CAST-203ENST00000338252 PCGF6Q9BYE7 350 aa11.15□□□□□ -0.62
CAST-203ENST00000338252 SCAF1Q9H7N4 1312 aaKnown RBP11.14□□□□□ -0.63
CAST-203ENST00000338252 RB1CC1Q8TDY2 1594 aa11.09□□□□□ -0.63
CAST-203ENST00000338252 MYO15BQ96JP2 1530 aa11.09□□□□□ -0.63
CAST-203ENST00000338252 PABPN1Q86U42 306 aaKnown RBP eCLIP11.07□□□□□ -0.64
CAST-203ENST00000338252 DNAJC5Q9H3Z4 198 aa11.04□□□□□ -0.64
CAST-203ENST00000338252 DCAF1Q9Y4B6 1507 aa10.92□□□□□ -0.66
CAST-203ENST00000338252 DCAF8L2P0C7V8 631 aa10.91□□□□□ -0.66
CAST-203ENST00000338252 NACADO15069 1562 aa10.9□□□□□ -0.66
CAST-203ENST00000338252 CHIC1Q5VXU3 224 aa10.85□□□□□ -0.67
CAST-203ENST00000338252 SUPT5HO00267 1087 aaKnown RBP10.81□□□□□ -0.68
CAST-203ENST00000338252 ZEB1P37275 1124 aaPredicted RBP10.79□□□□□ -0.68
CAST-203ENST00000338252 CECR2Q9BXF3 1484 aa10.78□□□□□ -0.68
CAST-203ENST00000338252 TRIM26Q12899 539 aaPredicted RBP10.78□□□□□ -0.68
CAST-203ENST00000338252 SLC24A1O60721 1099 aa10.77□□□□□ -0.68
CAST-203ENST00000338252 ACIN1Q9UKV3 1341 aaKnown RBP10.77□□□□□ -0.69
CAST-203ENST00000338252 UNC13AQ9UPW8 1703 aa10.76□□□□□ -0.69
CAST-203ENST00000338252 BICRAQ9NZM4 1560 aa10.76□□□□□ -0.69
CAST-203ENST00000338252 SHROOM4Q9ULL8 1493 aa10.75□□□□□ -0.69
CAST-203ENST00000338252 NEUROD1Q13562 356 aa10.71□□□□□ -0.69
CAST-203ENST00000338252 TTBK1Q5TCY1 1321 aaPredicted RBP10.71□□□□□ -0.7
CAST-203ENST00000338252 CC2D2AQ9P2K1 1620 aa10.69□□□□□ -0.7
CAST-203ENST00000338252 GTF3C3Q9Y5Q9 886 aa10.66□□□□□ -0.7
CAST-203ENST00000338252 LOC105371045A0A1W2PR82 267 aa10.57□□□□□ -0.72
CAST-203ENST00000338252 EIF4G1Q04637 1599 aaKnown RBP10.56□□□□□ -0.72
CAST-203ENST00000338252 CENPBP07199 599 aaPredicted RBP10.54□□□□□ -0.72
CAST-203ENST00000338252 BCL11AQ9H165 835 aa10.48□□□□□ -0.73
CAST-203ENST00000338252 CUX2O14529 1486 aa10.44□□□□□ -0.74
CAST-203ENST00000338252 FAM9AQ8IZU1 332 aaPredicted RBP10.41□□□□□ -0.74
CAST-203ENST00000338252 DIEXFQ68CQ4 756 aaKnown RBP10.39□□□□□ -0.75
CAST-203ENST00000338252 TRIM41Q8WV44 630 aa10.39□□□□□ -0.75
CAST-203ENST00000338252 SCRIBQ14160 1630 aa10.38□□□□□ -0.75
CAST-203ENST00000338252 ERCC6Q03468 1493 aa10.34□□□□□ -0.75
CAST-203ENST00000338252 ZCCHC6Q5VYS8 1495 aaKnown RBP10.34□□□□□ -0.75
CAST-203ENST00000338252 EHMT2Q96KQ7 1210 aa10.33□□□□□ -0.76
CAST-203ENST00000338252 ANP32EQ9BTT0 268 aa10.32□□□□□ -0.76
CAST-203ENST00000338252 PRKCSHP14314 528 aaPredicted RBP10.29□□□□□ -0.76
CAST-203ENST00000338252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.23□□□□□ -0.77
CAST-203ENST00000338252 CCER1Q8TC90 406 aaPredicted RBP10.2□□□□□ -0.78
CAST-203ENST00000338252 CSRNP3Q8WYN3 585 aa10.19□□□□□ -0.78
CAST-203ENST00000338252 YTHDC1Q96MU7 727 aaKnown RBP10.18□□□□□ -0.78
CAST-203ENST00000338252 TSHZ2Q9NRE2 1034 aa10.15□□□□□ -0.78
CAST-203ENST00000338252 ZNF316A6NFI3 1004 aaPredicted RBP10.14□□□□□ -0.79
CAST-203ENST00000338252 CLSPNQ9HAW4 1339 aa10.13□□□□□ -0.79
CAST-203ENST00000338252 SUPT16HQ9Y5B9 1047 aaKnown RBP10.11□□□□□ -0.79
CAST-203ENST00000338252 MIER1Q8N108 512 aa10.11□□□□□ -0.79
CAST-203ENST00000338252 NCAPD3P42695 1498 aa10.09□□□□□ -0.79
CAST-203ENST00000338252 NESP48681 1621 aa10.08□□□□□ -0.8
CAST-203ENST00000338252 ERICH6Q7L0X2 663 aa10.05□□□□□ -0.8
CAST-203ENST00000338252 PLPPR3Q6T4P5 718 aa10.03□□□□□ -0.8
CAST-203ENST00000338252 THOC2Q8NI27 1593 aaKnown RBP10.01□□□□□ -0.81
CAST-203ENST00000338252 APLP2Q06481 763 aa10.01□□□□□ -0.81
CAST-203ENST00000338252 ATAD2BQ9ULI0 1458 aa9.99□□□□□ -0.81
CAST-203ENST00000338252 OSCARQ8IYS5 282 aa9.97□□□□□ -0.81
CAST-203ENST00000338252 SMARCA2P51531 1590 aa9.97□□□□□ -0.81
CAST-203ENST00000338252 HMGXB3Q12766 1538 aa9.93□□□□□ -0.82
CAST-203ENST00000338252 PDS5BQ9NTI5 1447 aa9.93□□□□□ -0.82
CAST-203ENST00000338252 AEBP2Q6ZN18 517 aaPredicted RBP9.92□□□□□ -0.82
CAST-203ENST00000338252 LAMC3Q9Y6N6 1575 aa9.91□□□□□ -0.82
CAST-203ENST00000338252 WRNQ14191 1432 aaPredicted RBP eCLIP9.9□□□□□ -0.83
CAST-203ENST00000338252 BAZ1BQ9UIG0 1483 aaKnown RBP9.88□□□□□ -0.83
CAST-203ENST00000338252 KIF21AQ7Z4S6 1674 aa9.87□□□□□ -0.83
CAST-203ENST00000338252 BAZ1AQ9NRL2 1556 aaPredicted RBP9.87□□□□□ -0.83
CAST-203ENST00000338252 RBM19Q9Y4C8 960 aaKnown RBP9.87□□□□□ -0.83
CAST-203ENST00000338252 TRHP20396 242 aaPredicted RBP9.85□□□□□ -0.83
CAST-203ENST00000338252 RTN4Q9NQC3 1192 aaKnown RBP9.84□□□□□ -0.83
CAST-203ENST00000338252 MSH5O43196 834 aa9.84□□□□□ -0.83
CAST-203ENST00000338252 MRC2Q9UBG0 1479 aa9.83□□□□□ -0.84
CAST-203ENST00000338252 SMARCA4P51532 1647 aa9.82□□□□□ -0.84
CAST-203ENST00000338252 RSF1Q96T23 1441 aaPredicted RBP9.81□□□□□ -0.84
CAST-203ENST00000338252 WDR62O43379 1518 aa9.79□□□□□ -0.84
CAST-203ENST00000338252 ANO8Q9HCE9 1232 aaPredicted RBP9.79□□□□□ -0.84
CAST-203ENST00000338252 CADPSQ9ULU8 1353 aa9.79□□□□□ -0.84
CAST-203ENST00000338252 RIMBP3CA6NJZ7 1639 aa9.78□□□□□ -0.84
CAST-203ENST00000338252 RIMBP3BA6NNM3 1639 aa9.78□□□□□ -0.84
CAST-203ENST00000338252 RIMBP3Q9UFD9 1639 aa9.78□□□□□ -0.84
CAST-203ENST00000338252 CYB5RLQ6IPT4 315 aa9.78□□□□□ -0.84
CAST-203ENST00000338252 MYT1LQ9UL68 1186 aa9.76□□□□□ -0.85
CAST-203ENST00000338252 FANCIQ9NVI1 1328 aa9.75□□□□□ -0.85
CAST-203ENST00000338252 BCANQ96GW7 911 aa9.75□□□□□ -0.85
CAST-203ENST00000338252 ARHGEF11O15085 1522 aa9.73□□□□□ -0.85
CAST-203ENST00000338252 FKBP8Q14318 412 aa9.72□□□□□ -0.85
CAST-203ENST00000338252 PEG3Q9GZU2 1588 aa9.71□□□□□ -0.85
CAST-203ENST00000338252 CEP162Q5TB80 1403 aa9.71□□□□□ -0.85
CAST-203ENST00000338252 CEP164Q9UPV0 1460 aa9.71□□□□□ -0.86
CAST-203ENST00000338252 DEKP35659 375 aaKnown RBP9.71□□□□□ -0.86
CAST-203ENST00000338252 POTEDQ86YR6 584 aa9.69□□□□□ -0.86
CAST-203ENST00000338252 ERICH6BQ5W0A0 696 aa9.68□□□□□ -0.86
CAST-203ENST00000338252 SALL2Q9Y467 1007 aaPredicted RBP9.66□□□□□ -0.86
CAST-203ENST00000338252 FANCD2Q9BXW9 1451 aa9.66□□□□□ -0.86
CAST-203ENST00000338252 UBE2Q2Q8WVN8 375 aa9.66□□□□□ -0.86
CAST-203ENST00000338252 KCNH8Q96L42 1107 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms