RNA–Protein interactions for RNA: ENST00000513027.3

RACK1-229, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-229ENST00000513027 NISCHQ9Y2I1 1504 aa27.95■■■□□ 2.06
RACK1-229ENST00000513027 CCDC180Q9P1Z9 1646 aa24.45■■□□□ 1.5
RACK1-229ENST00000513027 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
RACK1-229ENST00000513027 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
RACK1-229ENST00000513027 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
RACK1-229ENST00000513027 DCAF8L2P0C7V8 631 aa22.87■■□□□ 1.25
RACK1-229ENST00000513027 ABCC9O60706 1549 aa22.82■■□□□ 1.24
RACK1-229ENST00000513027 NACADO15069 1562 aa22.76■■□□□ 1.23
RACK1-229ENST00000513027 SHROOM4Q9ULL8 1493 aa22.55■■□□□ 1.2
RACK1-229ENST00000513027 RB1CC1Q8TDY2 1594 aa22.52■■□□□ 1.2
RACK1-229ENST00000513027 SCRIBQ14160 1630 aa22.25■■□□□ 1.15
RACK1-229ENST00000513027 UNC13AQ9UPW8 1703 aa21.9■■□□□ 1.1
RACK1-229ENST00000513027 SUPT5HO00267 1087 aaKnown RBP21.81■■□□□ 1.08
RACK1-229ENST00000513027 BICRAQ9NZM4 1560 aa21.7■■□□□ 1.06
RACK1-229ENST00000513027 RSF1Q96T23 1441 aaPredicted RBP21.65■■□□□ 1.06
RACK1-229ENST00000513027 BAZ1AQ9NRL2 1556 aaPredicted RBP21.64■■□□□ 1.05
RACK1-229ENST00000513027 CECR2Q9BXF3 1484 aa21.57■■□□□ 1.04
RACK1-229ENST00000513027 MROH2BQ7Z745 1585 aa21.49■■□□□ 1.03
RACK1-229ENST00000513027 PABPN1Q86U42 306 aaKnown RBP eCLIP21.47■■□□□ 1.03
RACK1-229ENST00000513027 SMARCA4P51532 1647 aa21.45■■□□□ 1.02
RACK1-229ENST00000513027 WIZO95785 1651 aa21.29■■□□□ 1
RACK1-229ENST00000513027 PEG3Q9GZU2 1588 aa21.29■■□□□ 1
RACK1-229ENST00000513027 TOP2AP11388 1531 aaKnown RBP21.21■□□□□ 0.99
RACK1-229ENST00000513027 SMARCA2P51531 1590 aa21.18■□□□□ 0.98
RACK1-229ENST00000513027 ATAD2BQ9ULI0 1458 aa21.09■□□□□ 0.97
RACK1-229ENST00000513027 EIF4G1Q04637 1599 aaKnown RBP21.09■□□□□ 0.97
RACK1-229ENST00000513027 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
RACK1-229ENST00000513027 NCAPD3P42695 1498 aa20.99■□□□□ 0.95
RACK1-229ENST00000513027 BAZ1BQ9UIG0 1483 aaKnown RBP20.99■□□□□ 0.95
RACK1-229ENST00000513027 HMGXB3Q12766 1538 aa20.97■□□□□ 0.95
RACK1-229ENST00000513027 CCDC88BA6NC98 1476 aa20.93■□□□□ 0.94
RACK1-229ENST00000513027 CC2D2AQ9P2K1 1620 aa20.73■□□□□ 0.91
RACK1-229ENST00000513027 TRIM41Q8WV44 630 aa20.64■□□□□ 0.89
RACK1-229ENST00000513027 CFTRP13569 1480 aa20.5■□□□□ 0.87
RACK1-229ENST00000513027 WRNQ14191 1432 aaPredicted RBP eCLIP20.42■□□□□ 0.86
RACK1-229ENST00000513027 CADPSQ9ULU8 1353 aa20.41■□□□□ 0.86
RACK1-229ENST00000513027 PRDM2Q13029 1718 aa20.41■□□□□ 0.86
RACK1-229ENST00000513027 ABCC8Q09428 1581 aa20.39■□□□□ 0.85
RACK1-229ENST00000513027 EEA1Q15075 1411 aa20.32■□□□□ 0.84
RACK1-229ENST00000513027 LAMC3Q9Y6N6 1575 aa20.27■□□□□ 0.84
RACK1-229ENST00000513027 TOP2BQ02880 1626 aa20.27■□□□□ 0.83
RACK1-229ENST00000513027 BIVM-ERCC5R4GMW8 1640 aa20.25■□□□□ 0.83
RACK1-229ENST00000513027 SYNJ1O43426 1573 aa20.23■□□□□ 0.83
RACK1-229ENST00000513027 FANCD2Q9BXW9 1451 aa20.14■□□□□ 0.81
RACK1-229ENST00000513027 PDS5BQ9NTI5 1447 aa20.12■□□□□ 0.81
RACK1-229ENST00000513027 CUX1P39880 1505 aa20.11■□□□□ 0.81
RACK1-229ENST00000513027 FAM9AQ8IZU1 332 aaPredicted RBP20.06■□□□□ 0.8
RACK1-229ENST00000513027 SOGA1O94964 1423 aa20.05■□□□□ 0.8
RACK1-229ENST00000513027 LOC105371045A0A1W2PR82 267 aa20.05■□□□□ 0.8
RACK1-229ENST00000513027 CSRNP3Q8WYN3 585 aa20.05■□□□□ 0.8
RACK1-229ENST00000513027 CEP164Q9UPV0 1460 aa20.04■□□□□ 0.8
RACK1-229ENST00000513027 NESP48681 1621 aa20.02■□□□□ 0.79
RACK1-229ENST00000513027 DNMBPQ6XZF7 1577 aa20.01■□□□□ 0.79
RACK1-229ENST00000513027 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
RACK1-229ENST00000513027 KIF27Q86VH2 1401 aa19.95■□□□□ 0.78
RACK1-229ENST00000513027 KIF21BO75037 1637 aa19.93■□□□□ 0.78
RACK1-229ENST00000513027 TOPBP1Q92547 1522 aa19.92■□□□□ 0.78
RACK1-229ENST00000513027 RUSC2Q8N2Y8 1516 aa19.92■□□□□ 0.78
RACK1-229ENST00000513027 GOLGA3Q08378 1498 aa19.91■□□□□ 0.78
RACK1-229ENST00000513027 FGD5Q6ZNL6 1462 aa19.9■□□□□ 0.78
RACK1-229ENST00000513027 TNIKQ9UKE5 1360 aa19.88■□□□□ 0.77
RACK1-229ENST00000513027 KIF21AQ7Z4S6 1674 aa19.84■□□□□ 0.77
RACK1-229ENST00000513027 URB2Q14146 1524 aaKnown RBP19.83■□□□□ 0.77
RACK1-229ENST00000513027 ERICH3Q5RHP9 1530 aa19.83■□□□□ 0.77
RACK1-229ENST00000513027 ABCA10Q8WWZ4 1543 aa19.82■□□□□ 0.76
RACK1-229ENST00000513027 POLA1P09884 1462 aaPredicted RBP19.81■□□□□ 0.76
RACK1-229ENST00000513027 PRXQ9BXM0 1461 aa19.79■□□□□ 0.76
RACK1-229ENST00000513027 CUX2O14529 1486 aa19.79■□□□□ 0.76
RACK1-229ENST00000513027 MRC2Q9UBG0 1479 aa19.79■□□□□ 0.76
RACK1-229ENST00000513027 UBTFP17480 764 aaKnown RBP19.73■□□□□ 0.75
RACK1-229ENST00000513027 IGF1RP08069 1367 aa19.7■□□□□ 0.74
RACK1-229ENST00000513027 WDR62O43379 1518 aa19.69■□□□□ 0.74
RACK1-229ENST00000513027 WDR97A6NE52 1622 aa19.69■□□□□ 0.74
RACK1-229ENST00000513027 CEP162Q5TB80 1403 aa19.68■□□□□ 0.74
RACK1-229ENST00000513027 RAPGEF2Q9Y4G8 1499 aa19.67■□□□□ 0.74
RACK1-229ENST00000513027 ERCC6Q03468 1493 aa19.66■□□□□ 0.74
RACK1-229ENST00000513027 RAD54L2Q9Y4B4 1467 aa19.66■□□□□ 0.74
RACK1-229ENST00000513027 CUL7Q14999 1698 aa19.63■□□□□ 0.73
RACK1-229ENST00000513027 EHMT2Q96KQ7 1210 aa19.63■□□□□ 0.73
RACK1-229ENST00000513027 CARMIL1Q5VZK9 1371 aa19.62■□□□□ 0.73
RACK1-229ENST00000513027 TARBP1Q13395 1621 aaKnown RBP19.62■□□□□ 0.73
RACK1-229ENST00000513027 ABCA5Q8WWZ7 1642 aa19.61■□□□□ 0.73
RACK1-229ENST00000513027 IFT140Q96RY7 1462 aa19.6■□□□□ 0.73
RACK1-229ENST00000513027 GAPVD1Q14C86 1478 aa19.57■□□□□ 0.72
RACK1-229ENST00000513027 CLIP1P30622 1438 aa19.55■□□□□ 0.72
RACK1-229ENST00000513027 THOC2Q8NI27 1593 aaKnown RBP19.55■□□□□ 0.72
RACK1-229ENST00000513027 TDRD9Q8NDG6 1382 aaKnown RBP19.49■□□□□ 0.71
RACK1-229ENST00000513027 GRIN2BQ13224 1484 aa19.45■□□□□ 0.7
RACK1-229ENST00000513027 TRIM26Q12899 539 aaPredicted RBP19.42■□□□□ 0.7
RACK1-229ENST00000513027 PBRM1Q86U86 1689 aa19.42■□□□□ 0.7
RACK1-229ENST00000513027 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
RACK1-229ENST00000513027 VPS8Q8N3P4 1428 aa19.42■□□□□ 0.7
RACK1-229ENST00000513027 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.697e-32■■■■■ 82.2
RACK1-229ENST00000513027 CTTNBP2Q8WZ74 1663 aa19.35■□□□□ 0.69
RACK1-229ENST00000513027 ADAMTS12P58397 1594 aa19.33■□□□□ 0.69
RACK1-229ENST00000513027 EFCAB5A4FU69 1503 aa19.33■□□□□ 0.68
RACK1-229ENST00000513027 MAGI1Q96QZ7 1491 aaPredicted RBP19.32■□□□□ 0.68
RACK1-229ENST00000513027 EIF4G3O43432 1585 aaKnown RBP19.32■□□□□ 0.68
RACK1-229ENST00000513027 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
RACK1-229ENST00000513027 ARHGAP35Q9NRY4 1499 aa19.3■□□□□ 0.68
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