RNA–Protein interactions for RNA: ENST00000511900.5

RACK1-226, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5 BASIC

Gene RACK1, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-226ENST00000511900 NISCHQ9Y2I1 1504 aa23.77■■□□□ 1.4
RACK1-226ENST00000511900 CCDC180Q9P1Z9 1646 aa20.69■□□□□ 0.9
RACK1-226ENST00000511900 ZCCHC6Q5VYS8 1495 aaKnown RBP19.99■□□□□ 0.79
RACK1-226ENST00000511900 DCAF1Q9Y4B6 1507 aa19.77■□□□□ 0.76
RACK1-226ENST00000511900 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
RACK1-226ENST00000511900 DCAF8L2P0C7V8 631 aa19.51■□□□□ 0.71
RACK1-226ENST00000511900 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
RACK1-226ENST00000511900 NACADO15069 1562 aa19.27■□□□□ 0.67
RACK1-226ENST00000511900 ABCC9O60706 1549 aa19.22■□□□□ 0.67
RACK1-226ENST00000511900 RB1CC1Q8TDY2 1594 aa19.02■□□□□ 0.64
RACK1-226ENST00000511900 SCRIBQ14160 1630 aa18.89■□□□□ 0.61
RACK1-226ENST00000511900 SUPT5HO00267 1087 aaKnown RBP18.82■□□□□ 0.6
RACK1-226ENST00000511900 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
RACK1-226ENST00000511900 UNC13AQ9UPW8 1703 aa18.42■□□□□ 0.54
RACK1-226ENST00000511900 BAZ1AQ9NRL2 1556 aaPredicted RBP18.39■□□□□ 0.53
RACK1-226ENST00000511900 CECR2Q9BXF3 1484 aa18.33■□□□□ 0.52
RACK1-226ENST00000511900 MROH2BQ7Z745 1585 aa18.27■□□□□ 0.52
RACK1-226ENST00000511900 BICRAQ9NZM4 1560 aa18.27■□□□□ 0.52
RACK1-226ENST00000511900 SMARCA4P51532 1647 aa18.19■□□□□ 0.5
RACK1-226ENST00000511900 CHIC1Q5VXU3 224 aa18.16■□□□□ 0.5
RACK1-226ENST00000511900 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
RACK1-226ENST00000511900 WIZO95785 1651 aa18.1■□□□□ 0.49
RACK1-226ENST00000511900 TOP2AP11388 1531 aaKnown RBP18.05■□□□□ 0.48
RACK1-226ENST00000511900 PEG3Q9GZU2 1588 aa18.04■□□□□ 0.48
RACK1-226ENST00000511900 SMARCA2P51531 1590 aa17.96■□□□□ 0.47
RACK1-226ENST00000511900 ATAD2BQ9ULI0 1458 aa17.87■□□□□ 0.45
RACK1-226ENST00000511900 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
RACK1-226ENST00000511900 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
RACK1-226ENST00000511900 TRIM41Q8WV44 630 aa17.8■□□□□ 0.44
RACK1-226ENST00000511900 EIF4G1Q04637 1599 aaKnown RBP17.77■□□□□ 0.44
RACK1-226ENST00000511900 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
RACK1-226ENST00000511900 HMGXB3Q12766 1538 aa17.73■□□□□ 0.43
RACK1-226ENST00000511900 EEA1Q15075 1411 aa17.46■□□□□ 0.39
RACK1-226ENST00000511900 WRNQ14191 1432 aaPredicted RBP eCLIP17.45■□□□□ 0.38
RACK1-226ENST00000511900 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
RACK1-226ENST00000511900 ABCC8Q09428 1581 aa17.4■□□□□ 0.38
RACK1-226ENST00000511900 CFTRP13569 1480 aa17.38■□□□□ 0.37
RACK1-226ENST00000511900 LOC105371045A0A1W2PR82 267 aa17.37■□□□□ 0.37
RACK1-226ENST00000511900 CADPSQ9ULU8 1353 aa17.31■□□□□ 0.36
RACK1-226ENST00000511900 FAM9AQ8IZU1 332 aaPredicted RBP17.31■□□□□ 0.36
RACK1-226ENST00000511900 PRDM2Q13029 1718 aa17.27■□□□□ 0.36
RACK1-226ENST00000511900 TOP2BQ02880 1626 aa17.25■□□□□ 0.35
RACK1-226ENST00000511900 CSRNP3Q8WYN3 585 aa17.24■□□□□ 0.35
RACK1-226ENST00000511900 SYNJ1O43426 1573 aa17.23■□□□□ 0.35
RACK1-226ENST00000511900 BIVM-ERCC5R4GMW8 1640 aa17.21■□□□□ 0.35
RACK1-226ENST00000511900 SOGA1O94964 1423 aa17.17■□□□□ 0.34
RACK1-226ENST00000511900 TNIKQ9UKE5 1360 aa17.12■□□□□ 0.33
RACK1-226ENST00000511900 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
RACK1-226ENST00000511900 GOLGA3Q08378 1498 aa17.11■□□□□ 0.33
RACK1-226ENST00000511900 CEP164Q9UPV0 1460 aa17.11■□□□□ 0.33
RACK1-226ENST00000511900 CUX1P39880 1505 aa17.09■□□□□ 0.33
RACK1-226ENST00000511900 KIF21BO75037 1637 aa17.07■□□□□ 0.32
RACK1-226ENST00000511900 FANCD2Q9BXW9 1451 aa17.06■□□□□ 0.32
RACK1-226ENST00000511900 KIF27Q86VH2 1401 aa17.05■□□□□ 0.32
RACK1-226ENST00000511900 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
RACK1-226ENST00000511900 UBTFP17480 764 aaKnown RBP17.02■□□□□ 0.32
RACK1-226ENST00000511900 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
RACK1-226ENST00000511900 DNMBPQ6XZF7 1577 aa16.97■□□□□ 0.31
RACK1-226ENST00000511900 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.31
RACK1-226ENST00000511900 TRIM26Q12899 539 aaPredicted RBP16.96■□□□□ 0.31
RACK1-226ENST00000511900 CEP162Q5TB80 1403 aa16.95■□□□□ 0.3
RACK1-226ENST00000511900 EHMT2Q96KQ7 1210 aa16.94■□□□□ 0.3
RACK1-226ENST00000511900 PRXQ9BXM0 1461 aa16.92■□□□□ 0.3
RACK1-226ENST00000511900 FGD5Q6ZNL6 1462 aa16.91■□□□□ 0.3
RACK1-226ENST00000511900 TOPBP1Q92547 1522 aa16.89■□□□□ 0.29
RACK1-226ENST00000511900 NESP48681 1621 aa16.88■□□□□ 0.29
RACK1-226ENST00000511900 CUX2O14529 1486 aa16.86■□□□□ 0.29
RACK1-226ENST00000511900 PCGF6Q9BYE7 350 aa16.86■□□□□ 0.29
RACK1-226ENST00000511900 RAPGEF2Q9Y4G8 1499 aa16.84■□□□□ 0.29
RACK1-226ENST00000511900 ABCA10Q8WWZ4 1543 aa16.84■□□□□ 0.29
RACK1-226ENST00000511900 CLIP1P30622 1438 aa16.81■□□□□ 0.28
RACK1-226ENST00000511900 IGF1RP08069 1367 aa16.8■□□□□ 0.28
RACK1-226ENST00000511900 POLA1P09884 1462 aaPredicted RBP16.8■□□□□ 0.28
RACK1-226ENST00000511900 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
RACK1-226ENST00000511900 CARMIL1Q5VZK9 1371 aa16.76■□□□□ 0.27
RACK1-226ENST00000511900 MRC2Q9UBG0 1479 aa16.73■□□□□ 0.27
RACK1-226ENST00000511900 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
RACK1-226ENST00000511900 VPS8Q8N3P4 1428 aa16.7■□□□□ 0.26
RACK1-226ENST00000511900 CUL7Q14999 1698 aa16.7■□□□□ 0.26
RACK1-226ENST00000511900 KIF21AQ7Z4S6 1674 aa16.7■□□□□ 0.26
RACK1-226ENST00000511900 APLP2Q06481 763 aa16.7■□□□□ 0.26
RACK1-226ENST00000511900 RAD54L2Q9Y4B4 1467 aa16.68■□□□□ 0.26
RACK1-226ENST00000511900 WDR97A6NE52 1622 aa16.64■□□□□ 0.25
RACK1-226ENST00000511900 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
RACK1-226ENST00000511900 ABCA5Q8WWZ7 1642 aa16.61■□□□□ 0.25
RACK1-226ENST00000511900 HRCP23327 699 aa16.61■□□□□ 0.25
RACK1-226ENST00000511900 IFT140Q96RY7 1462 aa16.6■□□□□ 0.25
RACK1-226ENST00000511900 WDR62O43379 1518 aa16.6■□□□□ 0.25
RACK1-226ENST00000511900 ERCC6Q03468 1493 aa16.58■□□□□ 0.24
RACK1-226ENST00000511900 TARBP1Q13395 1621 aaKnown RBP16.58■□□□□ 0.24
RACK1-226ENST00000511900 ZEB1P37275 1124 aaPredicted RBP16.56■□□□□ 0.24
RACK1-226ENST00000511900 TDRD9Q8NDG6 1382 aaKnown RBP16.54■□□□□ 0.24
RACK1-226ENST00000511900 EFCAB5A4FU69 1503 aa16.52■□□□□ 0.24
RACK1-226ENST00000511900 ARAP1Q96P48 1450 aa16.52■□□□□ 0.23
RACK1-226ENST00000511900 FHAD1B1AJZ9 1412 aa16.52■□□□□ 0.23
RACK1-226ENST00000511900 ARHGAP35Q9NRY4 1499 aa16.51■□□□□ 0.23
RACK1-226ENST00000511900 GRIN2BQ13224 1484 aa16.5■□□□□ 0.23
RACK1-226ENST00000511900 RANGAP1P46060 587 aaPredicted RBP16.49■□□□□ 0.23
RACK1-226ENST00000511900 MAP3K1Q13233 1512 aa16.47■□□□□ 0.23
RACK1-226ENST00000511900 CTTNBP2Q8WZ74 1663 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms