RNA–Protein interactions for RNA: ENST00000502844.5

RACK1-203, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 1,460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-203ENST00000502844 NISCHQ9Y2I1 1504 aa35.12■■■■□ 3.21
RACK1-203ENST00000502844 CCDC180Q9P1Z9 1646 aa30.8■■■□□ 2.52
RACK1-203ENST00000502844 ZCCHC6Q5VYS8 1495 aaKnown RBP29.43■■■□□ 2.3
RACK1-203ENST00000502844 ABCC9O60706 1549 aa29.33■■■□□ 2.29
RACK1-203ENST00000502844 DCAF8L2P0C7V8 631 aa29.1■■■□□ 2.25
RACK1-203ENST00000502844 DCAF1Q9Y4B6 1507 aa29.07■■■□□ 2.24
RACK1-203ENST00000502844 MYO15BQ96JP2 1530 aa28.85■■■□□ 2.21
RACK1-203ENST00000502844 NACADO15069 1562 aa28.76■■■□□ 2.19
RACK1-203ENST00000502844 RB1CC1Q8TDY2 1594 aa28.59■■■□□ 2.17
RACK1-203ENST00000502844 SHROOM4Q9ULL8 1493 aa28.39■■■□□ 2.14
RACK1-203ENST00000502844 SCRIBQ14160 1630 aa28.23■■■□□ 2.11
RACK1-203ENST00000502844 UNC13AQ9UPW8 1703 aa27.9■■■□□ 2.06
RACK1-203ENST00000502844 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
RACK1-203ENST00000502844 PABPN1Q86U42 306 aaKnown RBP eCLIP27.59■■■□□ 2.01
RACK1-203ENST00000502844 CECR2Q9BXF3 1484 aa27.26■■□□□ 1.95
RACK1-203ENST00000502844 SUPT5HO00267 1087 aaKnown RBP27.2■■□□□ 1.95
RACK1-203ENST00000502844 BAZ1AQ9NRL2 1556 aaPredicted RBP27.17■■□□□ 1.94
RACK1-203ENST00000502844 RSF1Q96T23 1441 aaPredicted RBP27.11■■□□□ 1.93
RACK1-203ENST00000502844 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
RACK1-203ENST00000502844 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
RACK1-203ENST00000502844 EIF4G1Q04637 1599 aaKnown RBP26.88■■□□□ 1.89
RACK1-203ENST00000502844 WIZO95785 1651 aa26.85■■□□□ 1.89
RACK1-203ENST00000502844 PEG3Q9GZU2 1588 aa26.74■■□□□ 1.87
RACK1-203ENST00000502844 SMARCA2P51531 1590 aa26.71■■□□□ 1.87
RACK1-203ENST00000502844 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
RACK1-203ENST00000502844 TOP2AP11388 1531 aaKnown RBP26.61■■□□□ 1.85
RACK1-203ENST00000502844 BAZ1BQ9UIG0 1483 aaKnown RBP26.55■■□□□ 1.84
RACK1-203ENST00000502844 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
RACK1-203ENST00000502844 NCAPD3P42695 1498 aa26.52■■□□□ 1.84
RACK1-203ENST00000502844 HMGXB3Q12766 1538 aa26.47■■□□□ 1.83
RACK1-203ENST00000502844 CCDC88BA6NC98 1476 aa26.3■■□□□ 1.8
RACK1-203ENST00000502844 DNAJC5BQ9UF47 199 aa26.06■■□□□ 1.76
RACK1-203ENST00000502844 CHIC1Q5VXU3 224 aa25.88■■□□□ 1.73
RACK1-203ENST00000502844 CFTRP13569 1480 aa25.84■■□□□ 1.73
RACK1-203ENST00000502844 CADPSQ9ULU8 1353 aa25.83■■□□□ 1.72
RACK1-203ENST00000502844 PRDM2Q13029 1718 aa25.7■■□□□ 1.7
RACK1-203ENST00000502844 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
RACK1-203ENST00000502844 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
RACK1-203ENST00000502844 NESP48681 1621 aa25.63■■□□□ 1.69
RACK1-203ENST00000502844 ABCC8Q09428 1581 aa25.63■■□□□ 1.69
RACK1-203ENST00000502844 WRNQ14191 1432 aaPredicted RBP eCLIP25.56■■□□□ 1.68
RACK1-203ENST00000502844 FANCD2Q9BXW9 1451 aa25.54■■□□□ 1.68
RACK1-203ENST00000502844 PDS5BQ9NTI5 1447 aa25.52■■□□□ 1.68
RACK1-203ENST00000502844 CEP164Q9UPV0 1460 aa25.43■■□□□ 1.66
RACK1-203ENST00000502844 SYNJ1O43426 1573 aa25.42■■□□□ 1.66
RACK1-203ENST00000502844 TOP2BQ02880 1626 aa25.38■■□□□ 1.65
RACK1-203ENST00000502844 CUX1P39880 1505 aa25.35■■□□□ 1.65
RACK1-203ENST00000502844 BIVM-ERCC5R4GMW8 1640 aa25.35■■□□□ 1.65
RACK1-203ENST00000502844 KIF21AQ7Z4S6 1674 aa25.33■■□□□ 1.65
RACK1-203ENST00000502844 DNMBPQ6XZF7 1577 aa25.26■■□□□ 1.63
RACK1-203ENST00000502844 ERCC6Q03468 1493 aa25.24■■□□□ 1.63
RACK1-203ENST00000502844 TOPBP1Q92547 1522 aa25.22■■□□□ 1.63
RACK1-203ENST00000502844 URB2Q14146 1524 aaKnown RBP25.2■■□□□ 1.62
RACK1-203ENST00000502844 MRC2Q9UBG0 1479 aa25.19■■□□□ 1.62
RACK1-203ENST00000502844 FGD5Q6ZNL6 1462 aa25.14■■□□□ 1.62
RACK1-203ENST00000502844 FAM9AQ8IZU1 332 aaPredicted RBP25.12■■□□□ 1.61
RACK1-203ENST00000502844 EEA1Q15075 1411 aa25.1■■□□□ 1.61
RACK1-203ENST00000502844 SOGA1O94964 1423 aa25.09■■□□□ 1.61
RACK1-203ENST00000502844 POLA1P09884 1462 aaPredicted RBP25.06■■□□□ 1.6
RACK1-203ENST00000502844 WDR62O43379 1518 aa25.05■■□□□ 1.6
RACK1-203ENST00000502844 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
RACK1-203ENST00000502844 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
RACK1-203ENST00000502844 KIF27Q86VH2 1401 aa24.97■■□□□ 1.59
RACK1-203ENST00000502844 RAD54L2Q9Y4B4 1467 aa24.96■■□□□ 1.59
RACK1-203ENST00000502844 CSRNP3Q8WYN3 585 aa24.95■■□□□ 1.58
RACK1-203ENST00000502844 CUX2O14529 1486 aa24.94■■□□□ 1.58
RACK1-203ENST00000502844 ABCA10Q8WWZ4 1543 aa24.93■■□□□ 1.58
RACK1-203ENST00000502844 IFT140Q96RY7 1462 aa24.84■■□□□ 1.57
RACK1-203ENST00000502844 WDR97A6NE52 1622 aa24.84■■□□□ 1.57
RACK1-203ENST00000502844 TARBP1Q13395 1621 aaKnown RBP24.84■■□□□ 1.57
RACK1-203ENST00000502844 LOC105371045A0A1W2PR82 267 aa24.84■■□□□ 1.57
RACK1-203ENST00000502844 TDRD9Q8NDG6 1382 aaKnown RBP24.76■■□□□ 1.55
RACK1-203ENST00000502844 EHMT2Q96KQ7 1210 aa24.74■■□□□ 1.55
RACK1-203ENST00000502844 KIF21BO75037 1637 aa24.73■■□□□ 1.55
RACK1-203ENST00000502844 ABCA5Q8WWZ7 1642 aa24.73■■□□□ 1.55
RACK1-203ENST00000502844 IGF1RP08069 1367 aa24.73■■□□□ 1.55
RACK1-203ENST00000502844 GAPVD1Q14C86 1478 aa24.72■■□□□ 1.55
RACK1-203ENST00000502844 GOLGA3Q08378 1498 aa24.71■■□□□ 1.55
RACK1-203ENST00000502844 PRXQ9BXM0 1461 aa24.68■■□□□ 1.54
RACK1-203ENST00000502844 ERICH3Q5RHP9 1530 aa24.65■■□□□ 1.54
RACK1-203ENST00000502844 ZNF608Q9ULD9 1512 aaPredicted RBP24.64■■□□□ 1.54
RACK1-203ENST00000502844 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.541e-12■■■■■ 88.5
RACK1-203ENST00000502844 CARMIL1Q5VZK9 1371 aa24.62■■□□□ 1.53
RACK1-203ENST00000502844 UBTFP17480 764 aaKnown RBP24.62■■□□□ 1.53
RACK1-203ENST00000502844 RAPGEF2Q9Y4G8 1499 aa24.61■■□□□ 1.53
RACK1-203ENST00000502844 CUL7Q14999 1698 aa24.61■■□□□ 1.53
RACK1-203ENST00000502844 GRIN2BQ13224 1484 aa24.6■■□□□ 1.53
RACK1-203ENST00000502844 PBRM1Q86U86 1689 aa24.59■■□□□ 1.53
RACK1-203ENST00000502844 EIF4G3O43432 1585 aaKnown RBP24.58■■□□□ 1.53
RACK1-203ENST00000502844 TNIKQ9UKE5 1360 aa24.56■■□□□ 1.52
RACK1-203ENST00000502844 FHAD1B1AJZ9 1412 aa24.47■■□□□ 1.51
RACK1-203ENST00000502844 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
RACK1-203ENST00000502844 SNAPC4Q5SXM2 1469 aa24.43■■□□□ 1.5
RACK1-203ENST00000502844 MAGI1Q96QZ7 1491 aaPredicted RBP24.42■■□□□ 1.5
RACK1-203ENST00000502844 CEP162Q5TB80 1403 aa24.39■■□□□ 1.49
RACK1-203ENST00000502844 SYNJ2O15056 1496 aa24.32■■□□□ 1.48
RACK1-203ENST00000502844 CHMP7Q8WUX9 453 aaPredicted RBP24.3■■□□□ 1.48
RACK1-203ENST00000502844 CLIP1P30622 1438 aa24.29■■□□□ 1.48
RACK1-203ENST00000502844 GRIN2AQ12879 1464 aa24.27■■□□□ 1.48
RACK1-203ENST00000502844 CTTNBP2Q8WZ74 1663 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms