RNA–Protein interactions for RNA: ENST00000455895.6

BSDC1-206, Transcript of BSD domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BSDC1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BSDC1-206ENST00000455895 NISCHQ9Y2I1 1504 aa26.17■■□□□ 1.78
BSDC1-206ENST00000455895 CCDC180Q9P1Z9 1646 aa22.4■■□□□ 1.18
BSDC1-206ENST00000455895 SHROOM4Q9ULL8 1493 aa22.21■■□□□ 1.15
BSDC1-206ENST00000455895 DCAF8L2P0C7V8 631 aa22.18■■□□□ 1.14
BSDC1-206ENST00000455895 ZCCHC6Q5VYS8 1495 aaKnown RBP22.01■■□□□ 1.11
BSDC1-206ENST00000455895 SUPT5HO00267 1087 aaKnown RBP21.57■■□□□ 1.04
BSDC1-206ENST00000455895 ABCC9O60706 1549 aa21.39■■□□□ 1.01
BSDC1-206ENST00000455895 DCAF1Q9Y4B6 1507 aa21.36■■□□□ 1.01
BSDC1-206ENST00000455895 SCRIBQ14160 1630 aa21.08■□□□□ 0.97
BSDC1-206ENST00000455895 MYO15BQ96JP2 1530 aa20.9■□□□□ 0.94
BSDC1-206ENST00000455895 NACADO15069 1562 aa20.86■□□□□ 0.93
BSDC1-206ENST00000455895 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
BSDC1-206ENST00000455895 CHIC1Q5VXU3 224 aa20.6■□□□□ 0.89
BSDC1-206ENST00000455895 RSF1Q96T23 1441 aaPredicted RBP20.56■□□□□ 0.88
BSDC1-206ENST00000455895 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.88
BSDC1-206ENST00000455895 PABPN1Q86U42 306 aaKnown RBP eCLIP20.42■□□□□ 0.86
BSDC1-206ENST00000455895 MROH2BQ7Z745 1585 aa20.37■□□□□ 0.85
BSDC1-206ENST00000455895 UNC13AQ9UPW8 1703 aa20.35■□□□□ 0.85
BSDC1-206ENST00000455895 WIZO95785 1651 aa20.25■□□□□ 0.83
BSDC1-206ENST00000455895 BAZ1AQ9NRL2 1556 aaPredicted RBP20.14■□□□□ 0.82
BSDC1-206ENST00000455895 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
BSDC1-206ENST00000455895 LOC105371045A0A1W2PR82 267 aa20.07■□□□□ 0.8
BSDC1-206ENST00000455895 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
BSDC1-206ENST00000455895 SMARCA4P51532 1647 aa20.04■□□□□ 0.8
BSDC1-206ENST00000455895 FAM9AQ8IZU1 332 aaPredicted RBP20■□□□□ 0.79
BSDC1-206ENST00000455895 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
BSDC1-206ENST00000455895 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
BSDC1-206ENST00000455895 CCDC88BA6NC98 1476 aa19.81■□□□□ 0.76
BSDC1-206ENST00000455895 SMARCA2P51531 1590 aa19.75■□□□□ 0.75
BSDC1-206ENST00000455895 ABCC8Q09428 1581 aa19.67■□□□□ 0.74
BSDC1-206ENST00000455895 ATAD2BQ9ULI0 1458 aa19.66■□□□□ 0.74
BSDC1-206ENST00000455895 EIF4G1Q04637 1599 aaKnown RBP19.62■□□□□ 0.73
BSDC1-206ENST00000455895 BAZ1BQ9UIG0 1483 aaKnown RBP19.62■□□□□ 0.73
BSDC1-206ENST00000455895 PCGF6Q9BYE7 350 aa19.58■□□□□ 0.73
BSDC1-206ENST00000455895 PEG3Q9GZU2 1588 aa19.58■□□□□ 0.72
BSDC1-206ENST00000455895 SOGA1O94964 1423 aa19.38■□□□□ 0.69
BSDC1-206ENST00000455895 WRNQ14191 1432 aaPredicted RBP eCLIP19.36■□□□□ 0.69
BSDC1-206ENST00000455895 RUSC2Q8N2Y8 1516 aa19.32■□□□□ 0.68
BSDC1-206ENST00000455895 NCAPD3P42695 1498 aa19.32■□□□□ 0.68
BSDC1-206ENST00000455895 PPARGC1BQ86YN6 1023 aaKnown RBP19.3■□□□□ 0.68
BSDC1-206ENST00000455895 SYNJ1O43426 1573 aa19.25■□□□□ 0.67
BSDC1-206ENST00000455895 HMGXB3Q12766 1538 aa19.25■□□□□ 0.67
BSDC1-206ENST00000455895 CSRNP3Q8WYN3 585 aa19.24■□□□□ 0.67
BSDC1-206ENST00000455895 UBTFP17480 764 aaKnown RBP19.24■□□□□ 0.67
BSDC1-206ENST00000455895 TRIM26Q12899 539 aaPredicted RBP19.2■□□□□ 0.66
BSDC1-206ENST00000455895 CC2D2AQ9P2K1 1620 aa19.17■□□□□ 0.66
BSDC1-206ENST00000455895 TTBK1Q5TCY1 1321 aaPredicted RBP19.14■□□□□ 0.66
BSDC1-206ENST00000455895 RANGAP1P46060 587 aaPredicted RBP19.11■□□□□ 0.65
BSDC1-206ENST00000455895 HRCP23327 699 aa19.1■□□□□ 0.65
BSDC1-206ENST00000455895 EEA1Q15075 1411 aa19.08■□□□□ 0.64
BSDC1-206ENST00000455895 CFTRP13569 1480 aa19.05■□□□□ 0.64
BSDC1-206ENST00000455895 CEP162Q5TB80 1403 aa19.04■□□□□ 0.64
BSDC1-206ENST00000455895 TOP2BQ02880 1626 aa19.01■□□□□ 0.63
BSDC1-206ENST00000455895 TNIKQ9UKE5 1360 aa19■□□□□ 0.63
BSDC1-206ENST00000455895 GOLGA3Q08378 1498 aa19■□□□□ 0.63
BSDC1-206ENST00000455895 CUX1P39880 1505 aa18.98■□□□□ 0.63
BSDC1-206ENST00000455895 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
BSDC1-206ENST00000455895 DNAJC5BQ9UF47 199 aa18.95■□□□□ 0.62
BSDC1-206ENST00000455895 CEP164Q9UPV0 1460 aa18.93■□□□□ 0.62
BSDC1-206ENST00000455895 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
BSDC1-206ENST00000455895 RAPGEF2Q9Y4G8 1499 aa18.91■□□□□ 0.62
BSDC1-206ENST00000455895 NESP48681 1621 aa18.89■□□□□ 0.61
BSDC1-206ENST00000455895 KIF21BO75037 1637 aa18.84■□□□□ 0.61
BSDC1-206ENST00000455895 PRDM2Q13029 1718 aa18.81■□□□□ 0.6
BSDC1-206ENST00000455895 FANCD2Q9BXW9 1451 aa18.81■□□□□ 0.6
BSDC1-206ENST00000455895 CLIP1P30622 1438 aa18.81■□□□□ 0.6
BSDC1-206ENST00000455895 KIF27Q86VH2 1401 aa18.8■□□□□ 0.6
BSDC1-206ENST00000455895 CUX2O14529 1486 aa18.77■□□□□ 0.59
BSDC1-206ENST00000455895 FGD5Q6ZNL6 1462 aa18.75■□□□□ 0.59
BSDC1-206ENST00000455895 PRXQ9BXM0 1461 aa18.7■□□□□ 0.58
BSDC1-206ENST00000455895 APLP2Q06481 763 aa18.68■□□□□ 0.58
BSDC1-206ENST00000455895 RAD54L2Q9Y4B4 1467 aa18.67■□□□□ 0.58
BSDC1-206ENST00000455895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.67■□□□□ 0.58
BSDC1-206ENST00000455895 IGF1RP08069 1367 aa18.63■□□□□ 0.57
BSDC1-206ENST00000455895 ERICH3Q5RHP9 1530 aa18.62■□□□□ 0.57
BSDC1-206ENST00000455895 VPS8Q8N3P4 1428 aa18.61■□□□□ 0.57
BSDC1-206ENST00000455895 TOPBP1Q92547 1522 aa18.61■□□□□ 0.57
BSDC1-206ENST00000455895 POLA1P09884 1462 aaPredicted RBP18.59■□□□□ 0.57
BSDC1-206ENST00000455895 CARMIL1Q5VZK9 1371 aa18.58■□□□□ 0.57
BSDC1-206ENST00000455895 DNMBPQ6XZF7 1577 aa18.58■□□□□ 0.56
BSDC1-206ENST00000455895 LAMC3Q9Y6N6 1575 aa18.57■□□□□ 0.56
BSDC1-206ENST00000455895 CCER1Q8TC90 406 aaPredicted RBP18.57■□□□□ 0.56
BSDC1-206ENST00000455895 URB2Q14146 1524 aaKnown RBP18.54■□□□□ 0.56
BSDC1-206ENST00000455895 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
BSDC1-206ENST00000455895 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
BSDC1-206ENST00000455895 P3H3Q8IVL6 736 aa18.53■□□□□ 0.56
BSDC1-206ENST00000455895 TDRD9Q8NDG6 1382 aaKnown RBP18.51■□□□□ 0.55
BSDC1-206ENST00000455895 ZEB1P37275 1124 aaPredicted RBP18.51■□□□□ 0.55
BSDC1-206ENST00000455895 ARAP1Q96P48 1450 aa18.5■□□□□ 0.55
BSDC1-206ENST00000455895 KIF21AQ7Z4S6 1674 aa18.49■□□□□ 0.55
BSDC1-206ENST00000455895 ATP1B4Q9UN42 357 aaPredicted RBP18.45■□□□□ 0.54
BSDC1-206ENST00000455895 ABCA10Q8WWZ4 1543 aa18.45■□□□□ 0.54
BSDC1-206ENST00000455895 KANK4Q5T7N3 995 aaPredicted RBP18.45■□□□□ 0.54
BSDC1-206ENST00000455895 ARHGAP35Q9NRY4 1499 aa18.44■□□□□ 0.54
BSDC1-206ENST00000455895 GAPVD1Q14C86 1478 aa18.34■□□□□ 0.53
BSDC1-206ENST00000455895 ITGAEP38570 1179 aa18.3■□□□□ 0.52
BSDC1-206ENST00000455895 FHOD3Q2V2M9 1422 aa18.29■□□□□ 0.52
BSDC1-206ENST00000455895 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.527e-8■■■■■ 38
BSDC1-206ENST00000455895 WDR97A6NE52 1622 aa18.28■□□□□ 0.52
BSDC1-206ENST00000455895 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms