RNA–Protein interactions for RNA: ENST00000507261.1

RACK1-215, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-215ENST00000507261 NISCHQ9Y2I1 1504 aa20.04■□□□□ 0.8
RACK1-215ENST00000507261 CCDC180Q9P1Z9 1646 aa17.61■□□□□ 0.41
RACK1-215ENST00000507261 ABCC9O60706 1549 aa16.91■□□□□ 0.3
RACK1-215ENST00000507261 ZCCHC6Q5VYS8 1495 aaKnown RBP16.76■□□□□ 0.27
RACK1-215ENST00000507261 DCAF8L2P0C7V8 631 aa16.6■□□□□ 0.25
RACK1-215ENST00000507261 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
RACK1-215ENST00000507261 MYO15BQ96JP2 1530 aa16.52■□□□□ 0.24
RACK1-215ENST00000507261 NACADO15069 1562 aa16.49■□□□□ 0.23
RACK1-215ENST00000507261 RB1CC1Q8TDY2 1594 aa16.41■□□□□ 0.22
RACK1-215ENST00000507261 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
RACK1-215ENST00000507261 SHROOM4Q9ULL8 1493 aa16.05■□□□□ 0.16
RACK1-215ENST00000507261 UNC13AQ9UPW8 1703 aa16.03■□□□□ 0.16
RACK1-215ENST00000507261 BICRAQ9NZM4 1560 aa15.94■□□□□ 0.14
RACK1-215ENST00000507261 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
RACK1-215ENST00000507261 CECR2Q9BXF3 1484 aa15.59■□□□□ 0.09
RACK1-215ENST00000507261 BAZ1AQ9NRL2 1556 aaPredicted RBP15.49■□□□□ 0.07
RACK1-215ENST00000507261 EIF4G1Q04637 1599 aaKnown RBP15.47■□□□□ 0.07
RACK1-215ENST00000507261 MROH2BQ7Z745 1585 aa15.46■□□□□ 0.07
RACK1-215ENST00000507261 SMARCA4P51532 1647 aa15.45■□□□□ 0.06
RACK1-215ENST00000507261 RSF1Q96T23 1441 aaPredicted RBP15.42■□□□□ 0.06
RACK1-215ENST00000507261 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
RACK1-215ENST00000507261 WIZO95785 1651 aa15.3■□□□□ 0.04
RACK1-215ENST00000507261 PEG3Q9GZU2 1588 aa15.3■□□□□ 0.04
RACK1-215ENST00000507261 DNAJC5BQ9UF47 199 aa15.3■□□□□ 0.04
RACK1-215ENST00000507261 ATAD2BQ9ULI0 1458 aa15.3■□□□□ 0.04
RACK1-215ENST00000507261 SUPT5HO00267 1087 aaKnown RBP15.29■□□□□ 0.04
RACK1-215ENST00000507261 SMARCA2P51531 1590 aa15.28■□□□□ 0.04
RACK1-215ENST00000507261 NCAPD3P42695 1498 aa15.24■□□□□ 0.03
RACK1-215ENST00000507261 HMGXB3Q12766 1538 aa15.17■□□□□ 0.02
RACK1-215ENST00000507261 BAZ1BQ9UIG0 1483 aaKnown RBP15.16■□□□□ 0.02
RACK1-215ENST00000507261 TOP2AP11388 1531 aaKnown RBP15.15■□□□□ 0.02
RACK1-215ENST00000507261 CCDC88BA6NC98 1476 aa15□□□□□ -0.01
RACK1-215ENST00000507261 CADPSQ9ULU8 1353 aa14.82□□□□□ -0.04
RACK1-215ENST00000507261 CFTRP13569 1480 aa14.8□□□□□ -0.04
RACK1-215ENST00000507261 NESP48681 1621 aa14.77□□□□□ -0.05
RACK1-215ENST00000507261 LAMC3Q9Y6N6 1575 aa14.74□□□□□ -0.05
RACK1-215ENST00000507261 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
RACK1-215ENST00000507261 PRDM2Q13029 1718 aa14.65□□□□□ -0.06
RACK1-215ENST00000507261 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
RACK1-215ENST00000507261 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
RACK1-215ENST00000507261 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
RACK1-215ENST00000507261 ABCC8Q09428 1581 aa14.54□□□□□ -0.08
RACK1-215ENST00000507261 ERCC6Q03468 1493 aa14.53□□□□□ -0.08
RACK1-215ENST00000507261 WRNQ14191 1432 aaPredicted RBP eCLIP14.5□□□□□ -0.09
RACK1-215ENST00000507261 CHIC1Q5VXU3 224 aa14.5□□□□□ -0.09
RACK1-215ENST00000507261 CUX1P39880 1505 aa14.48□□□□□ -0.09
RACK1-215ENST00000507261 URB2Q14146 1524 aaKnown RBP14.47□□□□□ -0.09
RACK1-215ENST00000507261 MRC2Q9UBG0 1479 aa14.47□□□□□ -0.09
RACK1-215ENST00000507261 DNAJC5Q9H3Z4 198 aa14.47□□□□□ -0.09
RACK1-215ENST00000507261 SYNJ1O43426 1573 aa14.46□□□□□ -0.09
RACK1-215ENST00000507261 DNMBPQ6XZF7 1577 aa14.44□□□□□ -0.1
RACK1-215ENST00000507261 TOPBP1Q92547 1522 aa14.44□□□□□ -0.1
RACK1-215ENST00000507261 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
RACK1-215ENST00000507261 TOP2BQ02880 1626 aa14.43□□□□□ -0.1
RACK1-215ENST00000507261 BIVM-ERCC5R4GMW8 1640 aa14.42□□□□□ -0.1
RACK1-215ENST00000507261 TRIM41Q8WV44 630 aa14.42□□□□□ -0.1
RACK1-215ENST00000507261 WDR62O43379 1518 aa14.41□□□□□ -0.1
RACK1-215ENST00000507261 FGD5Q6ZNL6 1462 aa14.36□□□□□ -0.11
RACK1-215ENST00000507261 POLA1P09884 1462 aaPredicted RBP14.34□□□□□ -0.11
RACK1-215ENST00000507261 CUX2O14529 1486 aa14.31□□□□□ -0.12
RACK1-215ENST00000507261 SOGA1O94964 1423 aa14.3□□□□□ -0.12
RACK1-215ENST00000507261 RAD54L2Q9Y4B4 1467 aa14.29□□□□□ -0.12
RACK1-215ENST00000507261 TARBP1Q13395 1621 aaKnown RBP14.26□□□□□ -0.13
RACK1-215ENST00000507261 IFT140Q96RY7 1462 aa14.25□□□□□ -0.13
RACK1-215ENST00000507261 ABCA10Q8WWZ4 1543 aa14.24□□□□□ -0.13
RACK1-215ENST00000507261 WDR97A6NE52 1622 aa14.2□□□□□ -0.14
RACK1-215ENST00000507261 RUSC2Q8N2Y8 1516 aa14.2□□□□□ -0.14
RACK1-215ENST00000507261 ZNF608Q9ULD9 1512 aaPredicted RBP14.18□□□□□ -0.14
RACK1-215ENST00000507261 TDRD9Q8NDG6 1382 aaKnown RBP14.18□□□□□ -0.14
RACK1-215ENST00000507261 KIF27Q86VH2 1401 aa14.17□□□□□ -0.14
RACK1-215ENST00000507261 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.147e-32■■■■■ 82.2
RACK1-215ENST00000507261 ABCA5Q8WWZ7 1642 aa14.14□□□□□ -0.15
RACK1-215ENST00000507261 EEA1Q15075 1411 aa14.14□□□□□ -0.15
RACK1-215ENST00000507261 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
RACK1-215ENST00000507261 FAM9AQ8IZU1 332 aaPredicted RBP14.12□□□□□ -0.15
RACK1-215ENST00000507261 IGF1RP08069 1367 aa14.1□□□□□ -0.15
RACK1-215ENST00000507261 EIF4G3O43432 1585 aaKnown RBP14.1□□□□□ -0.15
RACK1-215ENST00000507261 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
RACK1-215ENST00000507261 GRIN2BQ13224 1484 aa14.07□□□□□ -0.16
RACK1-215ENST00000507261 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
RACK1-215ENST00000507261 PBRM1Q86U86 1689 aa14.04□□□□□ -0.16
RACK1-215ENST00000507261 SNAPC4Q5SXM2 1469 aa14.01□□□□□ -0.17
RACK1-215ENST00000507261 PRXQ9BXM0 1461 aa14.01□□□□□ -0.17
RACK1-215ENST00000507261 CARMIL1Q5VZK9 1371 aa14□□□□□ -0.17
RACK1-215ENST00000507261 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
RACK1-215ENST00000507261 CUL7Q14999 1698 aa13.99□□□□□ -0.17
RACK1-215ENST00000507261 FHAD1B1AJZ9 1412 aa13.98□□□□□ -0.17
RACK1-215ENST00000507261 ADAMTS12P58397 1594 aa13.97□□□□□ -0.17
RACK1-215ENST00000507261 KIF21BO75037 1637 aa13.96□□□□□ -0.17
RACK1-215ENST00000507261 RAPGEF2Q9Y4G8 1499 aa13.95□□□□□ -0.18
RACK1-215ENST00000507261 SYNJ2O15056 1496 aa13.93□□□□□ -0.18
RACK1-215ENST00000507261 LOC105371045A0A1W2PR82 267 aa13.93□□□□□ -0.18
RACK1-215ENST00000507261 CHMP7Q8WUX9 453 aaPredicted RBP13.91□□□□□ -0.18
RACK1-215ENST00000507261 EHMT2Q96KQ7 1210 aa13.91□□□□□ -0.18
RACK1-215ENST00000507261 GOLGA3Q08378 1498 aa13.91□□□□□ -0.18
RACK1-215ENST00000507261 GRIN2AQ12879 1464 aa13.89□□□□□ -0.19
RACK1-215ENST00000507261 FBLN2P98095 1184 aa13.89□□□□□ -0.19
RACK1-215ENST00000507261 UBTFP17480 764 aaKnown RBP13.85□□□□□ -0.19
RACK1-215ENST00000507261 CHD1O14646 1710 aa13.84□□□□□ -0.19
RACK1-215ENST00000507261 NUP160Q12769 1436 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms