RNA–Protein interactions for RNA: ENST00000503081.1

RACK1-206, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-206ENST00000503081 NISCHQ9Y2I1 1504 aa21.54■■□□□ 1.04
RACK1-206ENST00000503081 ABCC9O60706 1549 aa21.27■■□□□ 1
RACK1-206ENST00000503081 DNAJC5BQ9UF47 199 aa21.23■□□□□ 0.99
RACK1-206ENST00000503081 DNAJC5Q9H3Z4 198 aa20.39■□□□□ 0.85
RACK1-206ENST00000503081 CCDC180Q9P1Z9 1646 aa19.83■□□□□ 0.76
RACK1-206ENST00000503081 PABPN1Q86U42 306 aaKnown RBP eCLIP19.65■□□□□ 0.74
RACK1-206ENST00000503081 RB1CC1Q8TDY2 1594 aa19.55■□□□□ 0.72
RACK1-206ENST00000503081 CECR2Q9BXF3 1484 aa19.27■□□□□ 0.67
RACK1-206ENST00000503081 UNC13AQ9UPW8 1703 aa19.15■□□□□ 0.66
RACK1-206ENST00000503081 BICRAQ9NZM4 1560 aa19.1■□□□□ 0.65
RACK1-206ENST00000503081 CC2D2AQ9P2K1 1620 aa19.1■□□□□ 0.65
RACK1-206ENST00000503081 NACADO15069 1562 aa19.09■□□□□ 0.65
RACK1-206ENST00000503081 TRIM41Q8WV44 630 aa18.99■□□□□ 0.63
RACK1-206ENST00000503081 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
RACK1-206ENST00000503081 CUX2O14529 1486 aa18.78■□□□□ 0.6
RACK1-206ENST00000503081 EIF4G1Q04637 1599 aaKnown RBP18.72■□□□□ 0.59
RACK1-206ENST00000503081 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
RACK1-206ENST00000503081 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
RACK1-206ENST00000503081 MYO15BQ96JP2 1530 aa18.34■□□□□ 0.53
RACK1-206ENST00000503081 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
RACK1-206ENST00000503081 SCRIBQ14160 1630 aa18.12■□□□□ 0.49
RACK1-206ENST00000503081 THOC2Q8NI27 1593 aaKnown RBP17.91■□□□□ 0.46
RACK1-206ENST00000503081 NESP48681 1621 aa17.91■□□□□ 0.46
RACK1-206ENST00000503081 OSCARQ8IYS5 282 aa17.78■□□□□ 0.44
RACK1-206ENST00000503081 TRHP20396 242 aaPredicted RBP17.73■□□□□ 0.43
RACK1-206ENST00000503081 SMARCA2P51531 1590 aa17.72■□□□□ 0.43
RACK1-206ENST00000503081 ILDR1Q86SU0 546 aaPredicted RBP17.72■□□□□ 0.43
RACK1-206ENST00000503081 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
RACK1-206ENST00000503081 RIMBP3CA6NJZ7 1639 aa17.68■□□□□ 0.42
RACK1-206ENST00000503081 RIMBP3BA6NNM3 1639 aa17.68■□□□□ 0.42
RACK1-206ENST00000503081 RIMBP3Q9UFD9 1639 aa17.68■□□□□ 0.42
RACK1-206ENST00000503081 NCAPD3P42695 1498 aa17.68■□□□□ 0.42
RACK1-206ENST00000503081 DCAF1Q9Y4B6 1507 aa17.63■□□□□ 0.41
RACK1-206ENST00000503081 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.4
RACK1-206ENST00000503081 ZCCHC6Q5VYS8 1495 aaKnown RBP17.55■□□□□ 0.4
RACK1-206ENST00000503081 CYB5RLQ6IPT4 315 aa17.5■□□□□ 0.39
RACK1-206ENST00000503081 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
RACK1-206ENST00000503081 LAMC3Q9Y6N6 1575 aa17.45■□□□□ 0.38
RACK1-206ENST00000503081 ATAD2BQ9ULI0 1458 aa17.45■□□□□ 0.38
RACK1-206ENST00000503081 PDS5BQ9NTI5 1447 aa17.42■□□□□ 0.38
RACK1-206ENST00000503081 HMGXB3Q12766 1538 aa17.38■□□□□ 0.37
RACK1-206ENST00000503081 MRC2Q9UBG0 1479 aa17.37■□□□□ 0.37
RACK1-206ENST00000503081 WDR62O43379 1518 aa17.35■□□□□ 0.37
RACK1-206ENST00000503081 ARAP1Q96P48 1450 aa17.24■□□□□ 0.35
RACK1-206ENST00000503081 BAZ1BQ9UIG0 1483 aaKnown RBP17.2■□□□□ 0.34
RACK1-206ENST00000503081 CADPSQ9ULU8 1353 aa17.09■□□□□ 0.33
RACK1-206ENST00000503081 SMARCA4P51532 1647 aa17.08■□□□□ 0.32
RACK1-206ENST00000503081 CEP164Q9UPV0 1460 aa17.03■□□□□ 0.32
RACK1-206ENST00000503081 ZNF608Q9ULD9 1512 aaPredicted RBP16.91■□□□□ 0.3
RACK1-206ENST00000503081 RSF1Q96T23 1441 aaPredicted RBP16.91■□□□□ 0.3
RACK1-206ENST00000503081 FANCD2Q9BXW9 1451 aa16.91■□□□□ 0.3
RACK1-206ENST00000503081 URB2Q14146 1524 aaKnown RBP16.88■□□□□ 0.29
RACK1-206ENST00000503081 PEG3Q9GZU2 1588 aa16.88■□□□□ 0.29
RACK1-206ENST00000503081 KDM4FA0A1W2PPD8 638 aa16.87■□□□□ 0.29
RACK1-206ENST00000503081 CHD1O14646 1710 aa16.83■□□□□ 0.28
RACK1-206ENST00000503081 FBLN2P98095 1184 aa16.77■□□□□ 0.28
RACK1-206ENST00000503081 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
RACK1-206ENST00000503081 FBXO41Q8TF61 875 aa16.71■□□□□ 0.27
RACK1-206ENST00000503081 EIF4G3O43432 1585 aaKnown RBP16.68■□□□□ 0.26
RACK1-206ENST00000503081 LMTK3Q96Q04 1460 aa16.68■□□□□ 0.26
RACK1-206ENST00000503081 MROH2BQ7Z745 1585 aa16.63■□□□□ 0.25
RACK1-206ENST00000503081 SOCS7O14512 581 aa16.62■□□□□ 0.25
RACK1-206ENST00000503081 ERCC6L2Q5T890 1561 aa16.61■□□□□ 0.25
RACK1-206ENST00000503081 CFTRP13569 1480 aa16.61■□□□□ 0.25
RACK1-206ENST00000503081 AQRO60306 1485 aaKnown RBP eCLIP16.59■□□□□ 0.251e-12■■■■■ 79.8
RACK1-206ENST00000503081 CLASP1Q7Z460 1538 aa16.59■□□□□ 0.25
RACK1-206ENST00000503081 ILDR2Q71H61 639 aa16.57■□□□□ 0.24
RACK1-206ENST00000503081 HECW2Q9P2P5 1572 aa16.55■□□□□ 0.24
RACK1-206ENST00000503081 GAPVD1Q14C86 1478 aa16.55■□□□□ 0.24
RACK1-206ENST00000503081 KIF13AQ9H1H9 1805 aa16.51■□□□□ 0.23
RACK1-206ENST00000503081 TOPBP1Q92547 1522 aa16.44■□□□□ 0.22
RACK1-206ENST00000503081 SYNJ1O43426 1573 aa16.43■□□□□ 0.22
RACK1-206ENST00000503081 CHMP7Q8WUX9 453 aaPredicted RBP16.39■□□□□ 0.21
RACK1-206ENST00000503081 TARBP1Q13395 1621 aaKnown RBP16.38■□□□□ 0.21
RACK1-206ENST00000503081 SYNJ2O15056 1496 aa16.38■□□□□ 0.21
RACK1-206ENST00000503081 ADGRL1O94910 1474 aa16.36■□□□□ 0.21
RACK1-206ENST00000503081 WIZO95785 1651 aa16.36■□□□□ 0.21
RACK1-206ENST00000503081 KDM6BO15054 1643 aa16.35■□□□□ 0.21
RACK1-206ENST00000503081 SNAPC4Q5SXM2 1469 aa16.35■□□□□ 0.21
RACK1-206ENST00000503081 FAM69CQ0P6D2 419 aa16.34■□□□□ 0.21
RACK1-206ENST00000503081 DISP3Q9P2K9 1392 aa16.34■□□□□ 0.21
RACK1-206ENST00000503081 TDRD9Q8NDG6 1382 aaKnown RBP16.29■□□□□ 0.2
RACK1-206ENST00000503081 PRDM2Q13029 1718 aa16.25■□□□□ 0.19
RACK1-206ENST00000503081 ABCC10Q5T3U5 1492 aa16.23■□□□□ 0.19
RACK1-206ENST00000503081 ABCC8Q09428 1581 aa16.23■□□□□ 0.19
RACK1-206ENST00000503081 DNMBPQ6XZF7 1577 aa16.22■□□□□ 0.19
RACK1-206ENST00000503081 RAD54L2Q9Y4B4 1467 aa16.21■□□□□ 0.19
RACK1-206ENST00000503081 MAGI1Q96QZ7 1491 aaPredicted RBP16.19■□□□□ 0.18
RACK1-206ENST00000503081 POLA1P09884 1462 aaPredicted RBP16.18■□□□□ 0.18
RACK1-206ENST00000503081 DIP2BQ9P265 1576 aa16.14■□□□□ 0.17
RACK1-206ENST00000503081 TSPOAP1O95153 1857 aa16.14■□□□□ 0.17
RACK1-206ENST00000503081 SOGA1O94964 1423 aa16.11■□□□□ 0.17
RACK1-206ENST00000503081 CEP170Q5SW79 1584 aa16.09■□□□□ 0.17
RACK1-206ENST00000503081 GRIN2BQ13224 1484 aa16.08■□□□□ 0.16
RACK1-206ENST00000503081 MAPKBP1O60336 1514 aa16.03■□□□□ 0.16
RACK1-206ENST00000503081 NPM1P06748 294 aaKnown RBP eCLIP16.01■□□□□ 0.15
RACK1-206ENST00000503081 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
RACK1-206ENST00000503081 TOP2AP11388 1531 aaKnown RBP16■□□□□ 0.15
RACK1-206ENST00000503081 SPATA31D1Q6ZQQ2 1576 aa16■□□□□ 0.15
RACK1-206ENST00000503081 SHROOM2Q13796 1616 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms