RNA–Protein interactions for RNA: ENST00000511782.5

CAST-236, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-236ENST00000511782 NISCHQ9Y2I1 1504 aa16.74■□□□□ 0.27
CAST-236ENST00000511782 SHROOM4Q9ULL8 1493 aa14.57□□□□□ -0.08
CAST-236ENST00000511782 SUPT5HO00267 1087 aaKnown RBP14.31□□□□□ -0.12
CAST-236ENST00000511782 ZCCHC6Q5VYS8 1495 aaKnown RBP14.19□□□□□ -0.14
CAST-236ENST00000511782 CCDC180Q9P1Z9 1646 aa14.06□□□□□ -0.16
CAST-236ENST00000511782 MYO15BQ96JP2 1530 aa14.05□□□□□ -0.16
CAST-236ENST00000511782 DCAF8L2P0C7V8 631 aa13.96□□□□□ -0.18
CAST-236ENST00000511782 CHIC1Q5VXU3 224 aa13.96□□□□□ -0.18
CAST-236ENST00000511782 HRCP23327 699 aa13.75□□□□□ -0.21
CAST-236ENST00000511782 PCGF6Q9BYE7 350 aa13.72□□□□□ -0.21
CAST-236ENST00000511782 LOC105371045A0A1W2PR82 267 aa13.65□□□□□ -0.22
CAST-236ENST00000511782 PPARGC1BQ86YN6 1023 aaKnown RBP13.63□□□□□ -0.23
CAST-236ENST00000511782 DCAF1Q9Y4B6 1507 aa13.62□□□□□ -0.23
CAST-236ENST00000511782 ABCC9O60706 1549 aa13.42□□□□□ -0.26
CAST-236ENST00000511782 SCRIBQ14160 1630 aa13.37□□□□□ -0.27
CAST-236ENST00000511782 RSF1Q96T23 1441 aaPredicted RBP13.36□□□□□ -0.27
CAST-236ENST00000511782 RB1CC1Q8TDY2 1594 aa13.3□□□□□ -0.28
CAST-236ENST00000511782 TRIM26Q12899 539 aaPredicted RBP13.29□□□□□ -0.28
CAST-236ENST00000511782 FAM9AQ8IZU1 332 aaPredicted RBP13.25□□□□□ -0.29
CAST-236ENST00000511782 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
CAST-236ENST00000511782 TRIM41Q8WV44 630 aa13.22□□□□□ -0.29
CAST-236ENST00000511782 CECR2Q9BXF3 1484 aa13.17□□□□□ -0.3
CAST-236ENST00000511782 MROH2BQ7Z745 1585 aa13.1□□□□□ -0.31
CAST-236ENST00000511782 WIZO95785 1651 aa13.06□□□□□ -0.32
CAST-236ENST00000511782 NACADO15069 1562 aa12.97□□□□□ -0.33
CAST-236ENST00000511782 ZEB1P37275 1124 aaPredicted RBP12.93□□□□□ -0.34
CAST-236ENST00000511782 EIF4G1Q04637 1599 aaKnown RBP12.91□□□□□ -0.34
CAST-236ENST00000511782 BAZ1AQ9NRL2 1556 aaPredicted RBP12.88□□□□□ -0.35
CAST-236ENST00000511782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
CAST-236ENST00000511782 SCAF1Q9H7N4 1312 aaKnown RBP12.86□□□□□ -0.35
CAST-236ENST00000511782 ABCC8Q09428 1581 aa12.85□□□□□ -0.35
CAST-236ENST00000511782 CCDC88BA6NC98 1476 aa12.82□□□□□ -0.36
CAST-236ENST00000511782 TTBK1Q5TCY1 1321 aaPredicted RBP12.82□□□□□ -0.36
CAST-236ENST00000511782 SOGA1O94964 1423 aa12.75□□□□□ -0.37
CAST-236ENST00000511782 CCER1Q8TC90 406 aaPredicted RBP12.73□□□□□ -0.37
CAST-236ENST00000511782 UNC13AQ9UPW8 1703 aa12.73□□□□□ -0.37
CAST-236ENST00000511782 TOP2AP11388 1531 aaKnown RBP12.73□□□□□ -0.37
CAST-236ENST00000511782 SMARCA4P51532 1647 aa12.73□□□□□ -0.37
CAST-236ENST00000511782 SMARCA2P51531 1590 aa12.73□□□□□ -0.37
CAST-236ENST00000511782 RUSC2Q8N2Y8 1516 aa12.72□□□□□ -0.37
CAST-236ENST00000511782 CEP162Q5TB80 1403 aa12.69□□□□□ -0.38
CAST-236ENST00000511782 WRNQ14191 1432 aaPredicted RBP eCLIP12.65□□□□□ -0.38
CAST-236ENST00000511782 NEUROD1Q13562 356 aa12.64□□□□□ -0.39
CAST-236ENST00000511782 TNIKQ9UKE5 1360 aa12.6□□□□□ -0.39
CAST-236ENST00000511782 PABPN1Q86U42 306 aaKnown RBP eCLIP12.6□□□□□ -0.39
CAST-236ENST00000511782 DIEXFQ68CQ4 756 aaKnown RBP12.59□□□□□ -0.39
CAST-236ENST00000511782 CSRNP3Q8WYN3 585 aa12.59□□□□□ -0.39
CAST-236ENST00000511782 UBTFP17480 764 aaKnown RBP12.58□□□□□ -0.4
CAST-236ENST00000511782 ACIN1Q9UKV3 1341 aaKnown RBP12.58□□□□□ -0.4
CAST-236ENST00000511782 BICRAQ9NZM4 1560 aa12.53□□□□□ -0.4
CAST-236ENST00000511782 SYNJ1O43426 1573 aa12.51□□□□□ -0.41
CAST-236ENST00000511782 GTF3C3Q9Y5Q9 886 aa12.49□□□□□ -0.41
CAST-236ENST00000511782 GOLGA3Q08378 1498 aa12.49□□□□□ -0.41
CAST-236ENST00000511782 EEA1Q15075 1411 aa12.48□□□□□ -0.41
CAST-236ENST00000511782 HNRNPUL2Q1KMD3 747 aaKnown RBP12.46□□□□□ -0.41
CAST-236ENST00000511782 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
CAST-236ENST00000511782 RANGAP1P46060 587 aaPredicted RBP12.43□□□□□ -0.42
CAST-236ENST00000511782 PEG3Q9GZU2 1588 aa12.42□□□□□ -0.42
CAST-236ENST00000511782 ZNF316A6NFI3 1004 aaPredicted RBP12.41□□□□□ -0.42
CAST-236ENST00000511782 RAPGEF2Q9Y4G8 1499 aa12.41□□□□□ -0.42
CAST-236ENST00000511782 CLIP1P30622 1438 aa12.4□□□□□ -0.42
CAST-236ENST00000511782 CEP164Q9UPV0 1460 aa12.39□□□□□ -0.43
CAST-236ENST00000511782 KIF21BO75037 1637 aa12.39□□□□□ -0.43
CAST-236ENST00000511782 YTHDC1Q96MU7 727 aaKnown RBP12.38□□□□□ -0.43
CAST-236ENST00000511782 MIER1Q8N108 512 aa12.37□□□□□ -0.43
CAST-236ENST00000511782 ATAD2BQ9ULI0 1458 aa12.37□□□□□ -0.43
CAST-236ENST00000511782 CENPBP07199 599 aaPredicted RBP12.36□□□□□ -0.43
CAST-236ENST00000511782 VPS8Q8N3P4 1428 aa12.35□□□□□ -0.43
CAST-236ENST00000511782 BAZ1BQ9UIG0 1483 aaKnown RBP12.31□□□□□ -0.44
CAST-236ENST00000511782 TOP2BQ02880 1626 aa12.26□□□□□ -0.45
CAST-236ENST00000511782 KANK4Q5T7N3 995 aaPredicted RBP12.26□□□□□ -0.45
CAST-236ENST00000511782 ARAP1Q96P48 1450 aa12.23□□□□□ -0.45
CAST-236ENST00000511782 APLP2Q06481 763 aa12.22□□□□□ -0.45
CAST-236ENST00000511782 BIVM-ERCC5R4GMW8 1640 aa12.2□□□□□ -0.46
CAST-236ENST00000511782 PRXQ9BXM0 1461 aa12.2□□□□□ -0.46
CAST-236ENST00000511782 DHX57Q6P158 1386 aaKnown RBP12.2□□□□□ -0.46
CAST-236ENST00000511782 CUX1P39880 1505 aa12.17□□□□□ -0.46
CAST-236ENST00000511782 ERICH3Q5RHP9 1530 aa12.14□□□□□ -0.47
CAST-236ENST00000511782 ARHGAP35Q9NRY4 1499 aa12.09□□□□□ -0.47
CAST-236ENST00000511782 ITGAEP38570 1179 aa12.09□□□□□ -0.47
CAST-236ENST00000511782 RRBP1Q9P2E9 1410 aaKnown RBP12.09□□□□□ -0.47
CAST-236ENST00000511782 CLSPNQ9HAW4 1339 aa12.05□□□□□ -0.48
CAST-236ENST00000511782 KCNH8Q96L42 1107 aa12.05□□□□□ -0.48
CAST-236ENST00000511782 KIF27Q86VH2 1401 aa12.05□□□□□ -0.48
CAST-236ENST00000511782 NCAPD3P42695 1498 aa12.05□□□□□ -0.48
CAST-236ENST00000511782 CCNB3Q8WWL7 1395 aa12.03□□□□□ -0.48
CAST-236ENST00000511782 HMGXB3Q12766 1538 aa12.03□□□□□ -0.48
CAST-236ENST00000511782 CFTRP13569 1480 aa12.02□□□□□ -0.48
CAST-236ENST00000511782 CUX2O14529 1486 aa12.02□□□□□ -0.49
CAST-236ENST00000511782 MAPKBP1O60336 1514 aa12□□□□□ -0.49
CAST-236ENST00000511782 RAB3GAP2Q9H2M9 1393 aa11.99□□□□□ -0.49
CAST-236ENST00000511782 SUPT16HQ9Y5B9 1047 aaKnown RBP11.99□□□□□ -0.49
CAST-236ENST00000511782 IGF1RP08069 1367 aa11.99□□□□□ -0.49
CAST-236ENST00000511782 PHLDB1Q86UU1 1377 aa11.95□□□□□ -0.5
CAST-236ENST00000511782 TIAM1Q13009 1591 aa11.94□□□□□ -0.5
CAST-236ENST00000511782 SIN3AQ96ST3 1273 aa11.94□□□□□ -0.5
CAST-236ENST00000511782 P3H3Q8IVL6 736 aa11.93□□□□□ -0.5
CAST-236ENST00000511782 WDR97A6NE52 1622 aa11.92□□□□□ -0.5
CAST-236ENST00000511782 CARMIL1Q5VZK9 1371 aa11.9□□□□□ -0.5
CAST-236ENST00000511782 LRRC9Q6ZRR7 1453 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms