RNA–Protein interactions for RNA: ENST00000506312.3

RACK1-213, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-213ENST00000506312 NISCHQ9Y2I1 1504 aa20.81■□□□□ 0.92
RACK1-213ENST00000506312 ABCC9O60706 1549 aa20.12■□□□□ 0.81
RACK1-213ENST00000506312 DNAJC5BQ9UF47 199 aa19.66■□□□□ 0.74
RACK1-213ENST00000506312 CCDC180Q9P1Z9 1646 aa19.01■□□□□ 0.63
RACK1-213ENST00000506312 DNAJC5Q9H3Z4 198 aa18.66■□□□□ 0.58
RACK1-213ENST00000506312 PABPN1Q86U42 306 aaKnown RBP eCLIP18.63■□□□□ 0.57
RACK1-213ENST00000506312 RB1CC1Q8TDY2 1594 aa18.6■□□□□ 0.57
RACK1-213ENST00000506312 DCAF8L2P0C7V8 631 aa18.21■□□□□ 0.51
RACK1-213ENST00000506312 NACADO15069 1562 aa18.21■□□□□ 0.51
RACK1-213ENST00000506312 CECR2Q9BXF3 1484 aa18.17■□□□□ 0.5
RACK1-213ENST00000506312 UNC13AQ9UPW8 1703 aa18.17■□□□□ 0.5
RACK1-213ENST00000506312 BICRAQ9NZM4 1560 aa18.11■□□□□ 0.49
RACK1-213ENST00000506312 CC2D2AQ9P2K1 1620 aa18.04■□□□□ 0.48
RACK1-213ENST00000506312 EIF4G1Q04637 1599 aaKnown RBP17.76■□□□□ 0.43
RACK1-213ENST00000506312 TRIM41Q8WV44 630 aa17.66■□□□□ 0.42
RACK1-213ENST00000506312 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
RACK1-213ENST00000506312 CUX2O14529 1486 aa17.57■□□□□ 0.4
RACK1-213ENST00000506312 MYO15BQ96JP2 1530 aa17.55■□□□□ 0.4
RACK1-213ENST00000506312 SCRIBQ14160 1630 aa17.45■□□□□ 0.38
RACK1-213ENST00000506312 ERCC6Q03468 1493 aa17.44■□□□□ 0.38
RACK1-213ENST00000506312 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
RACK1-213ENST00000506312 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
RACK1-213ENST00000506312 NESP48681 1621 aa17.01■□□□□ 0.31
RACK1-213ENST00000506312 THOC2Q8NI27 1593 aaKnown RBP16.94■□□□□ 0.3
RACK1-213ENST00000506312 SMARCA2P51531 1590 aa16.89■□□□□ 0.29
RACK1-213ENST00000506312 NCAPD3P42695 1498 aa16.83■□□□□ 0.28
RACK1-213ENST00000506312 AEBP2Q6ZN18 517 aaPredicted RBP16.79■□□□□ 0.28
RACK1-213ENST00000506312 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
RACK1-213ENST00000506312 KIF21AQ7Z4S6 1674 aa16.7■□□□□ 0.26
RACK1-213ENST00000506312 ATAD2BQ9ULI0 1458 aa16.7■□□□□ 0.26
RACK1-213ENST00000506312 OSCARQ8IYS5 282 aa16.68■□□□□ 0.26
RACK1-213ENST00000506312 HMGXB3Q12766 1538 aa16.62■□□□□ 0.25
RACK1-213ENST00000506312 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
RACK1-213ENST00000506312 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
RACK1-213ENST00000506312 PDS5BQ9NTI5 1447 aa16.58■□□□□ 0.24
RACK1-213ENST00000506312 RIMBP3CA6NJZ7 1639 aa16.58■□□□□ 0.24
RACK1-213ENST00000506312 RIMBP3BA6NNM3 1639 aa16.58■□□□□ 0.24
RACK1-213ENST00000506312 RIMBP3Q9UFD9 1639 aa16.58■□□□□ 0.24
RACK1-213ENST00000506312 BAZ1BQ9UIG0 1483 aaKnown RBP16.54■□□□□ 0.24
RACK1-213ENST00000506312 MRC2Q9UBG0 1479 aa16.52■□□□□ 0.23
RACK1-213ENST00000506312 WDR62O43379 1518 aa16.47■□□□□ 0.23
RACK1-213ENST00000506312 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
RACK1-213ENST00000506312 CYB5RLQ6IPT4 315 aa16.44■□□□□ 0.22
RACK1-213ENST00000506312 ARHGEF11O15085 1522 aa16.44■□□□□ 0.22
RACK1-213ENST00000506312 CADPSQ9ULU8 1353 aa16.32■□□□□ 0.2
RACK1-213ENST00000506312 CEP164Q9UPV0 1460 aa16.29■□□□□ 0.2
RACK1-213ENST00000506312 ARAP1Q96P48 1450 aa16.22■□□□□ 0.19
RACK1-213ENST00000506312 ILDR1Q86SU0 546 aaPredicted RBP16.21■□□□□ 0.19
RACK1-213ENST00000506312 PEG3Q9GZU2 1588 aa16.2■□□□□ 0.18
RACK1-213ENST00000506312 FANCD2Q9BXW9 1451 aa16.18■□□□□ 0.18
RACK1-213ENST00000506312 URB2Q14146 1524 aaKnown RBP16.11■□□□□ 0.17
RACK1-213ENST00000506312 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
RACK1-213ENST00000506312 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
RACK1-213ENST00000506312 FBLN2P98095 1184 aa16.02■□□□□ 0.16
RACK1-213ENST00000506312 CHD1O14646 1710 aa15.99■□□□□ 0.15
RACK1-213ENST00000506312 RSF1Q96T23 1441 aaPredicted RBP15.96■□□□□ 0.15
RACK1-213ENST00000506312 IFT140Q96RY7 1462 aa15.95■□□□□ 0.14
RACK1-213ENST00000506312 EIF4G3O43432 1585 aaKnown RBP15.93■□□□□ 0.14
RACK1-213ENST00000506312 CFTRP13569 1480 aa15.91■□□□□ 0.14
RACK1-213ENST00000506312 WIZO95785 1651 aa15.86■□□□□ 0.13
RACK1-213ENST00000506312 AQRO60306 1485 aaKnown RBP eCLIP15.84■□□□□ 0.131e-12■■■■■ 79.8
RACK1-213ENST00000506312 TOPBP1Q92547 1522 aa15.76■□□□□ 0.11
RACK1-213ENST00000506312 CLASP1Q7Z460 1538 aa15.73■□□□□ 0.11
RACK1-213ENST00000506312 GAPVD1Q14C86 1478 aa15.7■□□□□ 0.1
RACK1-213ENST00000506312 KDM4FA0A1W2PPD8 638 aa15.69■□□□□ 0.1
RACK1-213ENST00000506312 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
RACK1-213ENST00000506312 CHMP7Q8WUX9 453 aaPredicted RBP15.65■□□□□ 0.1
RACK1-213ENST00000506312 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
RACK1-213ENST00000506312 TARBP1Q13395 1621 aaKnown RBP15.65■□□□□ 0.1
RACK1-213ENST00000506312 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
RACK1-213ENST00000506312 TDRD9Q8NDG6 1382 aaKnown RBP15.62■□□□□ 0.09
RACK1-213ENST00000506312 DNMBPQ6XZF7 1577 aa15.59■□□□□ 0.09
RACK1-213ENST00000506312 RAD54L2Q9Y4B4 1467 aa15.57■□□□□ 0.08
RACK1-213ENST00000506312 ABCC8Q09428 1581 aa15.56■□□□□ 0.08
RACK1-213ENST00000506312 TOP2AP11388 1531 aaKnown RBP15.54■□□□□ 0.08
RACK1-213ENST00000506312 POLA1P09884 1462 aaPredicted RBP15.54■□□□□ 0.08
RACK1-213ENST00000506312 KIF13AQ9H1H9 1805 aa15.54■□□□□ 0.08
RACK1-213ENST00000506312 ERCC6L2Q5T890 1561 aa15.52■□□□□ 0.07
RACK1-213ENST00000506312 MAGI1Q96QZ7 1491 aaPredicted RBP15.47■□□□□ 0.07
RACK1-213ENST00000506312 SYNJ2O15056 1496 aa15.46■□□□□ 0.07
RACK1-213ENST00000506312 HECW2Q9P2P5 1572 aa15.46■□□□□ 0.07
RACK1-213ENST00000506312 SOGA1O94964 1423 aa15.46■□□□□ 0.07
RACK1-213ENST00000506312 FAM69CQ0P6D2 419 aa15.45■□□□□ 0.06
RACK1-213ENST00000506312 KDM6BO15054 1643 aa15.43■□□□□ 0.06
RACK1-213ENST00000506312 FBXO41Q8TF61 875 aa15.42■□□□□ 0.06
RACK1-213ENST00000506312 GRIN2BQ13224 1484 aa15.41■□□□□ 0.06
RACK1-213ENST00000506312 CCDC88BA6NC98 1476 aa15.4■□□□□ 0.06
RACK1-213ENST00000506312 ADGRL1O94910 1474 aa15.37■□□□□ 0.05
RACK1-213ENST00000506312 LMTK3Q96Q04 1460 aa15.37■□□□□ 0.05
RACK1-213ENST00000506312 FGD5Q6ZNL6 1462 aa15.34■□□□□ 0.05
RACK1-213ENST00000506312 CEP170Q5SW79 1584 aa15.34■□□□□ 0.05
RACK1-213ENST00000506312 ABCC10Q5T3U5 1492 aa15.33■□□□□ 0.05
RACK1-213ENST00000506312 WDR97A6NE52 1622 aa15.32■□□□□ 0.04
RACK1-213ENST00000506312 TSPOAP1O95153 1857 aa15.29■□□□□ 0.04
RACK1-213ENST00000506312 PBRM1Q86U86 1689 aa15.29■□□□□ 0.04
RACK1-213ENST00000506312 DIP2BQ9P265 1576 aa15.29■□□□□ 0.04
RACK1-213ENST00000506312 NPM1P06748 294 aaKnown RBP eCLIP15.26■□□□□ 0.03
RACK1-213ENST00000506312 GRIN2AQ12879 1464 aa15.23■□□□□ 0.03
RACK1-213ENST00000506312 ILDR2Q71H61 639 aa15.21■□□□□ 0.03
RACK1-213ENST00000506312 SOCS7O14512 581 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms