RNA–Protein interactions for RNA: ENST00000504465.5

CAST-213, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-213ENST00000504465 NISCHQ9Y2I1 1504 aa18.43■□□□□ 0.54
CAST-213ENST00000504465 SHROOM4Q9ULL8 1493 aa15.77■□□□□ 0.12
CAST-213ENST00000504465 ZCCHC6Q5VYS8 1495 aaKnown RBP15.62■□□□□ 0.09
CAST-213ENST00000504465 CCDC180Q9P1Z9 1646 aa15.54■□□□□ 0.08
CAST-213ENST00000504465 SUPT5HO00267 1087 aaKnown RBP15.52■□□□□ 0.07
CAST-213ENST00000504465 CHIC1Q5VXU3 224 aa15.21■□□□□ 0.03
CAST-213ENST00000504465 DCAF8L2P0C7V8 631 aa15.18■□□□□ 0.02
CAST-213ENST00000504465 MYO15BQ96JP2 1530 aa15.18■□□□□ 0.02
CAST-213ENST00000504465 DCAF1Q9Y4B6 1507 aa15.13■□□□□ 0.01
CAST-213ENST00000504465 HRCP23327 699 aa14.92□□□□□ -0.02
CAST-213ENST00000504465 PCGF6Q9BYE7 350 aa14.8□□□□□ -0.04
CAST-213ENST00000504465 LOC105371045A0A1W2PR82 267 aa14.76□□□□□ -0.05
CAST-213ENST00000504465 ABCC9O60706 1549 aa14.73□□□□□ -0.05
CAST-213ENST00000504465 RSF1Q96T23 1441 aaPredicted RBP14.66□□□□□ -0.06
CAST-213ENST00000504465 SCRIBQ14160 1630 aa14.6□□□□□ -0.07
CAST-213ENST00000504465 PPARGC1BQ86YN6 1023 aaKnown RBP14.6□□□□□ -0.07
CAST-213ENST00000504465 TRIM26Q12899 539 aaPredicted RBP14.51□□□□□ -0.09
CAST-213ENST00000504465 RB1CC1Q8TDY2 1594 aa14.47□□□□□ -0.09
CAST-213ENST00000504465 TRIM41Q8WV44 630 aa14.44□□□□□ -0.1
CAST-213ENST00000504465 CECR2Q9BXF3 1484 aa14.4□□□□□ -0.1
CAST-213ENST00000504465 NACADO15069 1562 aa14.37□□□□□ -0.11
CAST-213ENST00000504465 MROH2BQ7Z745 1585 aa14.34□□□□□ -0.11
CAST-213ENST00000504465 FAM9AQ8IZU1 332 aaPredicted RBP14.33□□□□□ -0.12
CAST-213ENST00000504465 WIZO95785 1651 aa14.23□□□□□ -0.13
CAST-213ENST00000504465 ZEB1P37275 1124 aaPredicted RBP14.21□□□□□ -0.13
CAST-213ENST00000504465 EHMT2Q96KQ7 1210 aa14.18□□□□□ -0.14
CAST-213ENST00000504465 BAZ1AQ9NRL2 1556 aaPredicted RBP14.15□□□□□ -0.14
CAST-213ENST00000504465 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
CAST-213ENST00000504465 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.16
CAST-213ENST00000504465 CCDC88BA6NC98 1476 aa14□□□□□ -0.17
CAST-213ENST00000504465 SMARCA4P51532 1647 aa13.98□□□□□ -0.17
CAST-213ENST00000504465 ABCC8Q09428 1581 aa13.96□□□□□ -0.17
CAST-213ENST00000504465 SMARCA2P51531 1590 aa13.96□□□□□ -0.18
CAST-213ENST00000504465 WRNQ14191 1432 aaPredicted RBP eCLIP13.92□□□□□ -0.18
CAST-213ENST00000504465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.9□□□□□ -0.18
CAST-213ENST00000504465 SOGA1O94964 1423 aa13.9□□□□□ -0.18
CAST-213ENST00000504465 CEP162Q5TB80 1403 aa13.86□□□□□ -0.19
CAST-213ENST00000504465 TNIKQ9UKE5 1360 aa13.86□□□□□ -0.19
CAST-213ENST00000504465 UNC13AQ9UPW8 1703 aa13.85□□□□□ -0.19
CAST-213ENST00000504465 CCER1Q8TC90 406 aaPredicted RBP13.84□□□□□ -0.19
CAST-213ENST00000504465 RUSC2Q8N2Y8 1516 aa13.83□□□□□ -0.2
CAST-213ENST00000504465 SCAF1Q9H7N4 1312 aaKnown RBP13.83□□□□□ -0.2
CAST-213ENST00000504465 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
CAST-213ENST00000504465 EEA1Q15075 1411 aa13.81□□□□□ -0.2
CAST-213ENST00000504465 BICRAQ9NZM4 1560 aa13.77□□□□□ -0.2
CAST-213ENST00000504465 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
CAST-213ENST00000504465 TTBK1Q5TCY1 1321 aaPredicted RBP13.75□□□□□ -0.21
CAST-213ENST00000504465 PEG3Q9GZU2 1588 aa13.74□□□□□ -0.21
CAST-213ENST00000504465 UBTFP17480 764 aaKnown RBP13.73□□□□□ -0.21
CAST-213ENST00000504465 GOLGA3Q08378 1498 aa13.71□□□□□ -0.21
CAST-213ENST00000504465 SYNJ1O43426 1573 aa13.66□□□□□ -0.22
CAST-213ENST00000504465 DIEXFQ68CQ4 756 aaKnown RBP13.65□□□□□ -0.22
CAST-213ENST00000504465 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
CAST-213ENST00000504465 ATAD2BQ9ULI0 1458 aa13.63□□□□□ -0.23
CAST-213ENST00000504465 CEP164Q9UPV0 1460 aa13.63□□□□□ -0.23
CAST-213ENST00000504465 NEUROD1Q13562 356 aa13.62□□□□□ -0.23
CAST-213ENST00000504465 KIF21BO75037 1637 aa13.61□□□□□ -0.23
CAST-213ENST00000504465 PELP1Q8IZL8 1130 aaKnown RBP13.59□□□□□ -0.23
CAST-213ENST00000504465 CLIP1P30622 1438 aa13.57□□□□□ -0.24
CAST-213ENST00000504465 BAZ1BQ9UIG0 1483 aaKnown RBP13.55□□□□□ -0.24
CAST-213ENST00000504465 ZNF316A6NFI3 1004 aaPredicted RBP13.54□□□□□ -0.24
CAST-213ENST00000504465 RAPGEF2Q9Y4G8 1499 aa13.54□□□□□ -0.24
CAST-213ENST00000504465 VPS8Q8N3P4 1428 aa13.54□□□□□ -0.24
CAST-213ENST00000504465 HNRNPUL2Q1KMD3 747 aaKnown RBP13.51□□□□□ -0.25
CAST-213ENST00000504465 CENPBP07199 599 aaPredicted RBP13.47□□□□□ -0.25
CAST-213ENST00000504465 TOP2BQ02880 1626 aa13.46□□□□□ -0.25
CAST-213ENST00000504465 GTF3C3Q9Y5Q9 886 aa13.46□□□□□ -0.25
CAST-213ENST00000504465 PRXQ9BXM0 1461 aa13.42□□□□□ -0.26
CAST-213ENST00000504465 RANGAP1P46060 587 aaPredicted RBP13.41□□□□□ -0.26
CAST-213ENST00000504465 APLP2Q06481 763 aa13.41□□□□□ -0.26
CAST-213ENST00000504465 BIVM-ERCC5R4GMW8 1640 aa13.4□□□□□ -0.26
CAST-213ENST00000504465 MIER1Q8N108 512 aa13.38□□□□□ -0.27
CAST-213ENST00000504465 ERICH3Q5RHP9 1530 aa13.37□□□□□ -0.27
CAST-213ENST00000504465 ARAP1Q96P48 1450 aa13.37□□□□□ -0.27
CAST-213ENST00000504465 NCAPD3P42695 1498 aa13.35□□□□□ -0.27
CAST-213ENST00000504465 CUX1P39880 1505 aa13.34□□□□□ -0.27
CAST-213ENST00000504465 KANK4Q5T7N3 995 aaPredicted RBP13.33□□□□□ -0.28
CAST-213ENST00000504465 HMGXB3Q12766 1538 aa13.32□□□□□ -0.28
CAST-213ENST00000504465 DHX57Q6P158 1386 aaKnown RBP13.31□□□□□ -0.28
CAST-213ENST00000504465 YTHDC1Q96MU7 727 aaKnown RBP13.3□□□□□ -0.28
CAST-213ENST00000504465 CLSPNQ9HAW4 1339 aa13.29□□□□□ -0.28
CAST-213ENST00000504465 KIF27Q86VH2 1401 aa13.28□□□□□ -0.28
CAST-213ENST00000504465 CFTRP13569 1480 aa13.27□□□□□ -0.28
CAST-213ENST00000504465 RRBP1Q9P2E9 1410 aaKnown RBP13.26□□□□□ -0.29
CAST-213ENST00000504465 ARHGAP35Q9NRY4 1499 aa13.23□□□□□ -0.29
CAST-213ENST00000504465 CUX2O14529 1486 aa13.22□□□□□ -0.29
CAST-213ENST00000504465 IGF1RP08069 1367 aa13.19□□□□□ -0.3
CAST-213ENST00000504465 CCNB3Q8WWL7 1395 aa13.18□□□□□ -0.3
CAST-213ENST00000504465 CADPSQ9ULU8 1353 aa13.1□□□□□ -0.31
CAST-213ENST00000504465 MAP3K1Q13233 1512 aa13.1□□□□□ -0.31
CAST-213ENST00000504465 CARMIL1Q5VZK9 1371 aa13.09□□□□□ -0.31
CAST-213ENST00000504465 ITGAEP38570 1179 aa13.08□□□□□ -0.32
CAST-213ENST00000504465 RAB3GAP2Q9H2M9 1393 aa13.08□□□□□ -0.32
CAST-213ENST00000504465 TIAM1Q13009 1591 aa13.07□□□□□ -0.32
CAST-213ENST00000504465 MAPKBP1O60336 1514 aa13.06□□□□□ -0.32
CAST-213ENST00000504465 FGD5Q6ZNL6 1462 aa13.06□□□□□ -0.32
CAST-213ENST00000504465 LRRC9Q6ZRR7 1453 aa13.05□□□□□ -0.32
CAST-213ENST00000504465 PRDM2Q13029 1718 aa13.04□□□□□ -0.32
CAST-213ENST00000504465 PHLDB1Q86UU1 1377 aa13.04□□□□□ -0.32
CAST-213ENST00000504465 SETD5Q9C0A6 1442 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms