RNA–Protein interactions for RNA: ENST00000325674.11

CAST-202, Transcript of calpastatin, humanhuman

TSL 5 BASIC

Gene CAST, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-202ENST00000325674 PELP1Q8IZL8 1130 aaKnown RBP12.7□□□□□ -0.38
CAST-202ENST00000325674 MYT1Q01538 1121 aa12.44□□□□□ -0.42
CAST-202ENST00000325674 NISCHQ9Y2I1 1504 aa12.24□□□□□ -0.45
CAST-202ENST00000325674 HRCP23327 699 aa12.18□□□□□ -0.46
CAST-202ENST00000325674 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
CAST-202ENST00000325674 SCAF1Q9H7N4 1312 aaKnown RBP11.76□□□□□ -0.53
CAST-202ENST00000325674 MYO15BQ96JP2 1530 aa11.58□□□□□ -0.56
CAST-202ENST00000325674 PPARGC1BQ86YN6 1023 aaKnown RBP11.58□□□□□ -0.56
CAST-202ENST00000325674 CCDC180Q9P1Z9 1646 aa11.49□□□□□ -0.57
CAST-202ENST00000325674 DCAF1Q9Y4B6 1507 aa11.47□□□□□ -0.57
CAST-202ENST00000325674 PRKCSHP14314 528 aaPredicted RBP11.39□□□□□ -0.59
CAST-202ENST00000325674 BCL11AQ9H165 835 aa11.32□□□□□ -0.6
CAST-202ENST00000325674 APLP2Q06481 763 aa11.31□□□□□ -0.6
CAST-202ENST00000325674 ACIN1Q9UKV3 1341 aaKnown RBP11.31□□□□□ -0.6
CAST-202ENST00000325674 PCGF6Q9BYE7 350 aa11.3□□□□□ -0.6
CAST-202ENST00000325674 ZEB1P37275 1124 aaPredicted RBP11.24□□□□□ -0.61
CAST-202ENST00000325674 FAM9AQ8IZU1 332 aaPredicted RBP11.22□□□□□ -0.61
CAST-202ENST00000325674 ERICH6Q7L0X2 663 aa11.17□□□□□ -0.62
CAST-202ENST00000325674 NEUROD1Q13562 356 aa11.16□□□□□ -0.62
CAST-202ENST00000325674 CENPBP07199 599 aaPredicted RBP11.14□□□□□ -0.63
CAST-202ENST00000325674 GTF3C3Q9Y5Q9 886 aa11.08□□□□□ -0.64
CAST-202ENST00000325674 TRIM26Q12899 539 aaPredicted RBP11.06□□□□□ -0.64
CAST-202ENST00000325674 ANP32EQ9BTT0 268 aa11□□□□□ -0.65
CAST-202ENST00000325674 CHIC1Q5VXU3 224 aa10.97□□□□□ -0.65
CAST-202ENST00000325674 CLSPNQ9HAW4 1339 aa10.8□□□□□ -0.68
CAST-202ENST00000325674 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
CAST-202ENST00000325674 TRIM41Q8WV44 630 aa10.71□□□□□ -0.69
CAST-202ENST00000325674 TSHZ2Q9NRE2 1034 aa10.68□□□□□ -0.7
CAST-202ENST00000325674 DIEXFQ68CQ4 756 aaKnown RBP10.67□□□□□ -0.7
CAST-202ENST00000325674 SLC24A1O60721 1099 aa10.62□□□□□ -0.71
CAST-202ENST00000325674 UBE2Q2Q8WVN8 375 aa10.6□□□□□ -0.71
CAST-202ENST00000325674 SUPT16HQ9Y5B9 1047 aaKnown RBP10.55□□□□□ -0.72
CAST-202ENST00000325674 SUPT5HO00267 1087 aaKnown RBP10.53□□□□□ -0.72
CAST-202ENST00000325674 LOC105371045A0A1W2PR82 267 aa10.51□□□□□ -0.73
CAST-202ENST00000325674 ZCCHC6Q5VYS8 1495 aaKnown RBP10.5□□□□□ -0.73
CAST-202ENST00000325674 DAXXQ9UER7 740 aaPredicted RBP10.5□□□□□ -0.73
CAST-202ENST00000325674 MYT1LQ9UL68 1186 aa10.49□□□□□ -0.73
CAST-202ENST00000325674 ERICH6BQ5W0A0 696 aa10.48□□□□□ -0.73
CAST-202ENST00000325674 ANO8Q9HCE9 1232 aaPredicted RBP10.45□□□□□ -0.74
CAST-202ENST00000325674 ZNF316A6NFI3 1004 aaPredicted RBP10.42□□□□□ -0.74
CAST-202ENST00000325674 SHROOM4Q9ULL8 1493 aa10.4□□□□□ -0.74
CAST-202ENST00000325674 MSH5O43196 834 aa10.36□□□□□ -0.75
CAST-202ENST00000325674 FANCIQ9NVI1 1328 aa10.35□□□□□ -0.75
CAST-202ENST00000325674 MIER1Q8N108 512 aa10.35□□□□□ -0.75
CAST-202ENST00000325674 EIF5BO60841 1220 aaKnown RBP10.35□□□□□ -0.75
CAST-202ENST00000325674 RBM19Q9Y4C8 960 aaKnown RBP10.31□□□□□ -0.76
CAST-202ENST00000325674 SALL2Q9Y467 1007 aaPredicted RBP10.28□□□□□ -0.76
CAST-202ENST00000325674 WRNQ14191 1432 aaPredicted RBP eCLIP10.27□□□□□ -0.77
CAST-202ENST00000325674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.26□□□□□ -0.77
CAST-202ENST00000325674 CCER1Q8TC90 406 aaPredicted RBP10.25□□□□□ -0.77
CAST-202ENST00000325674 YTHDC1Q96MU7 727 aaKnown RBP10.23□□□□□ -0.77
CAST-202ENST00000325674 DEKP35659 375 aaKnown RBP10.22□□□□□ -0.77
CAST-202ENST00000325674 PKNOX2Q96KN3 472 aa10.18□□□□□ -0.78
CAST-202ENST00000325674 C11orf95C9JLR9 678 aaPredicted RBP10.09□□□□□ -0.79
CAST-202ENST00000325674 ABCC9O60706 1549 aa10.08□□□□□ -0.8
CAST-202ENST00000325674 CCDC136Q96JN2 1154 aa10.06□□□□□ -0.8
CAST-202ENST00000325674 PLEKHG5O94827 1062 aa10.05□□□□□ -0.8
CAST-202ENST00000325674 WASHC2AQ641Q2 1341 aa10.01□□□□□ -0.81
CAST-202ENST00000325674 PODXL2Q9NZ53 605 aa10.01□□□□□ -0.81
CAST-202ENST00000325674 WASHC2CQ9Y4E1 1318 aa9.99□□□□□ -0.81
CAST-202ENST00000325674 IL27Q8NEV9 243 aa9.98□□□□□ -0.81
CAST-202ENST00000325674 EIF4G1Q04637 1599 aaKnown RBP9.95□□□□□ -0.82
CAST-202ENST00000325674 FKBP8Q14318 412 aa9.95□□□□□ -0.82
CAST-202ENST00000325674 RB1CC1Q8TDY2 1594 aa9.95□□□□□ -0.82
CAST-202ENST00000325674 NACADO15069 1562 aa9.91□□□□□ -0.82
CAST-202ENST00000325674 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.91□□□□□ -0.82
CAST-202ENST00000325674 NOP58Q9Y2X3 529 aaKnown RBP9.89□□□□□ -0.83
CAST-202ENST00000325674 RSPH6AQ9H0K4 717 aa9.87□□□□□ -0.83
CAST-202ENST00000325674 NCAPD3P42695 1498 aa9.87□□□□□ -0.83
CAST-202ENST00000325674 CUX2O14529 1486 aa9.85□□□□□ -0.83
CAST-202ENST00000325674 BCANQ96GW7 911 aa9.84□□□□□ -0.83
CAST-202ENST00000325674 ZMYND15Q9H091 742 aa9.84□□□□□ -0.83
CAST-202ENST00000325674 USP35Q9P2H5 1018 aa9.84□□□□□ -0.83
CAST-202ENST00000325674 NEFLP07196 543 aa9.83□□□□□ -0.84
CAST-202ENST00000325674 PAK3O75914 559 aaPredicted RBP9.82□□□□□ -0.84
CAST-202ENST00000325674 CDK11AQ9UQ88 783 aaPredicted RBP9.82□□□□□ -0.84
CAST-202ENST00000325674 CEP162Q5TB80 1403 aa9.82□□□□□ -0.84
CAST-202ENST00000325674 DHX57Q6P158 1386 aaKnown RBP9.8□□□□□ -0.84
CAST-202ENST00000325674 EEA1Q15075 1411 aa9.8□□□□□ -0.84
CAST-202ENST00000325674 RSF1Q96T23 1441 aaPredicted RBP9.8□□□□□ -0.84
CAST-202ENST00000325674 CCER2I3L3R5 266 aa9.79□□□□□ -0.84
CAST-202ENST00000325674 TNIKQ9UKE5 1360 aa9.79□□□□□ -0.84
CAST-202ENST00000325674 GLIPR1L2Q4G1C9 344 aa9.78□□□□□ -0.84
CAST-202ENST00000325674 KCNH8Q96L42 1107 aa9.77□□□□□ -0.84
CAST-202ENST00000325674 ITGAEP38570 1179 aa9.77□□□□□ -0.85
CAST-202ENST00000325674 FGD1P98174 961 aa9.77□□□□□ -0.85
CAST-202ENST00000325674 PEG3Q9GZU2 1588 aa9.76□□□□□ -0.85
CAST-202ENST00000325674 AAMPQ13685 434 aa9.75□□□□□ -0.85
CAST-202ENST00000325674 FAM43AQ8N2R8 423 aa9.75□□□□□ -0.85
CAST-202ENST00000325674 IPO9Q96P70 1041 aaKnown RBP9.74□□□□□ -0.85
CAST-202ENST00000325674 RTN4Q9NQC3 1192 aaKnown RBP9.73□□□□□ -0.85
CAST-202ENST00000325674 SMARCA2P51531 1590 aa9.71□□□□□ -0.85
CAST-202ENST00000325674 NBR1Q14596 966 aa9.71□□□□□ -0.86
CAST-202ENST00000325674 PPP4R2Q9NY27 417 aa9.7□□□□□ -0.86
CAST-202ENST00000325674 PPP1R15AO75807 674 aaPredicted RBP9.69□□□□□ -0.86
CAST-202ENST00000325674 RTL5Q5HYW3 569 aaPredicted RBP9.69□□□□□ -0.86
CAST-202ENST00000325674 CENPJQ9HC77 1338 aaPredicted RBP9.69□□□□□ -0.86
CAST-202ENST00000325674 RRP9O43818 475 aaKnown RBP9.68□□□□□ -0.86
CAST-202ENST00000325674 MAPKBP1O60336 1514 aa9.66□□□□□ -0.86
CAST-202ENST00000325674 BRPF3Q9ULD4 1205 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms