RNA–Protein interactions for RNA: ENST00000512968.5

RACK1-228, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-228ENST00000512968 NISCHQ9Y2I1 1504 aa23.09■■□□□ 1.29
RACK1-228ENST00000512968 ABCC9O60706 1549 aa21.16■□□□□ 0.98
RACK1-228ENST00000512968 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
RACK1-228ENST00000512968 DNAJC5BQ9UF47 199 aa20.16■□□□□ 0.82
RACK1-228ENST00000512968 RB1CC1Q8TDY2 1594 aa19.91■□□□□ 0.78
RACK1-228ENST00000512968 DCAF8L2P0C7V8 631 aa19.76■□□□□ 0.75
RACK1-228ENST00000512968 PABPN1Q86U42 306 aaKnown RBP eCLIP19.74■□□□□ 0.75
RACK1-228ENST00000512968 NACADO15069 1562 aa19.72■□□□□ 0.75
RACK1-228ENST00000512968 BICRAQ9NZM4 1560 aa19.37■□□□□ 0.69
RACK1-228ENST00000512968 UNC13AQ9UPW8 1703 aa19.36■□□□□ 0.69
RACK1-228ENST00000512968 MYO15BQ96JP2 1530 aa19.34■□□□□ 0.69
RACK1-228ENST00000512968 ZCCHC6Q5VYS8 1495 aaKnown RBP19.08■□□□□ 0.64
RACK1-228ENST00000512968 CECR2Q9BXF3 1484 aa19.08■□□□□ 0.64
RACK1-228ENST00000512968 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
RACK1-228ENST00000512968 CC2D2AQ9P2K1 1620 aa19.02■□□□□ 0.64
RACK1-228ENST00000512968 DCAF1Q9Y4B6 1507 aa19■□□□□ 0.63
RACK1-228ENST00000512968 SCRIBQ14160 1630 aa18.97■□□□□ 0.63
RACK1-228ENST00000512968 EIF4G1Q04637 1599 aaKnown RBP18.93■□□□□ 0.62
RACK1-228ENST00000512968 DNAJC5Q9H3Z4 198 aa18.9■□□□□ 0.62
RACK1-228ENST00000512968 CUX2O14529 1486 aa18.28■□□□□ 0.52
RACK1-228ENST00000512968 ERCC6Q03468 1493 aa18.27■□□□□ 0.52
RACK1-228ENST00000512968 NCAPD3P42695 1498 aa18.26■□□□□ 0.51
RACK1-228ENST00000512968 ATAD2BQ9ULI0 1458 aa18.19■□□□□ 0.5
RACK1-228ENST00000512968 NESP48681 1621 aa18.1■□□□□ 0.49
RACK1-228ENST00000512968 SMARCA2P51531 1590 aa18.06■□□□□ 0.48
RACK1-228ENST00000512968 HMGXB3Q12766 1538 aa18.04■□□□□ 0.48
RACK1-228ENST00000512968 SMARCA4P51532 1647 aa18.03■□□□□ 0.48
RACK1-228ENST00000512968 BAZ1BQ9UIG0 1483 aaKnown RBP17.98■□□□□ 0.47
RACK1-228ENST00000512968 BAZ1AQ9NRL2 1556 aaPredicted RBP17.91■□□□□ 0.46
RACK1-228ENST00000512968 THOC2Q8NI27 1593 aaKnown RBP17.87■□□□□ 0.45
RACK1-228ENST00000512968 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.45
RACK1-228ENST00000512968 LAMC3Q9Y6N6 1575 aa17.83■□□□□ 0.44
RACK1-228ENST00000512968 MROH2BQ7Z745 1585 aa17.82■□□□□ 0.44
RACK1-228ENST00000512968 PDS5BQ9NTI5 1447 aa17.81■□□□□ 0.44
RACK1-228ENST00000512968 TRIM41Q8WV44 630 aa17.79■□□□□ 0.44
RACK1-228ENST00000512968 CADPSQ9ULU8 1353 aa17.73■□□□□ 0.43
RACK1-228ENST00000512968 KIF21AQ7Z4S6 1674 aa17.73■□□□□ 0.43
RACK1-228ENST00000512968 MRC2Q9UBG0 1479 aa17.66■□□□□ 0.42
RACK1-228ENST00000512968 WDR62O43379 1518 aa17.59■□□□□ 0.41
RACK1-228ENST00000512968 WIZO95785 1651 aa17.54■□□□□ 0.4
RACK1-228ENST00000512968 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
RACK1-228ENST00000512968 FANCD2Q9BXW9 1451 aa17.51■□□□□ 0.39
RACK1-228ENST00000512968 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
RACK1-228ENST00000512968 CFTRP13569 1480 aa17.44■□□□□ 0.38
RACK1-228ENST00000512968 URB2Q14146 1524 aaKnown RBP17.38■□□□□ 0.37
RACK1-228ENST00000512968 RSF1Q96T23 1441 aaPredicted RBP17.38■□□□□ 0.37
RACK1-228ENST00000512968 TOP2AP11388 1531 aaKnown RBP17.31■□□□□ 0.36
RACK1-228ENST00000512968 ZNF608Q9ULD9 1512 aaPredicted RBP17.24■□□□□ 0.35
RACK1-228ENST00000512968 IFT140Q96RY7 1462 aa17.2■□□□□ 0.34
RACK1-228ENST00000512968 RIMBP3CA6NJZ7 1639 aa17.19■□□□□ 0.34
RACK1-228ENST00000512968 RIMBP3BA6NNM3 1639 aa17.19■□□□□ 0.34
RACK1-228ENST00000512968 RIMBP3Q9UFD9 1639 aa17.19■□□□□ 0.34
RACK1-228ENST00000512968 CCDC88BA6NC98 1476 aa17.17■□□□□ 0.34
RACK1-228ENST00000512968 ARHGEF11O15085 1522 aa17.15■□□□□ 0.34
RACK1-228ENST00000512968 TOPBP1Q92547 1522 aa17.14■□□□□ 0.33
RACK1-228ENST00000512968 CYB5RLQ6IPT4 315 aa17.13■□□□□ 0.33
RACK1-228ENST00000512968 AQRO60306 1485 aaKnown RBP eCLIP17.07■□□□□ 0.323e-10■■■■■ 58.2
RACK1-228ENST00000512968 FBLN2P98095 1184 aa17.06■□□□□ 0.32
RACK1-228ENST00000512968 EIF4G3O43432 1585 aaKnown RBP17.04■□□□□ 0.32
RACK1-228ENST00000512968 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
RACK1-228ENST00000512968 ABCC8Q09428 1581 aa17.03■□□□□ 0.32
RACK1-228ENST00000512968 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
RACK1-228ENST00000512968 DNMBPQ6XZF7 1577 aa17.01■□□□□ 0.31
RACK1-228ENST00000512968 ARAP1Q96P48 1450 aa16.99■□□□□ 0.31
RACK1-228ENST00000512968 AEBP2Q6ZN18 517 aaPredicted RBP16.98■□□□□ 0.31
RACK1-228ENST00000512968 POLA1P09884 1462 aaPredicted RBP16.96■□□□□ 0.31
RACK1-228ENST00000512968 TARBP1Q13395 1621 aaKnown RBP16.95■□□□□ 0.3
RACK1-228ENST00000512968 RAD54L2Q9Y4B4 1467 aa16.94■□□□□ 0.3
RACK1-228ENST00000512968 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
RACK1-228ENST00000512968 CHD1O14646 1710 aa16.92■□□□□ 0.3
RACK1-228ENST00000512968 SOGA1O94964 1423 aa16.89■□□□□ 0.29
RACK1-228ENST00000512968 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
RACK1-228ENST00000512968 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
RACK1-228ENST00000512968 FGD5Q6ZNL6 1462 aa16.81■□□□□ 0.28
RACK1-228ENST00000512968 CLASP1Q7Z460 1538 aa16.78■□□□□ 0.28
RACK1-228ENST00000512968 GRIN2BQ13224 1484 aa16.75■□□□□ 0.27
RACK1-228ENST00000512968 MAGI1Q96QZ7 1491 aaPredicted RBP16.75■□□□□ 0.27
RACK1-228ENST00000512968 CUX1P39880 1505 aa16.75■□□□□ 0.27
RACK1-228ENST00000512968 SYNJ1O43426 1573 aa16.73■□□□□ 0.27
RACK1-228ENST00000512968 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
RACK1-228ENST00000512968 WDR97A6NE52 1622 aa16.7■□□□□ 0.26
RACK1-228ENST00000512968 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
RACK1-228ENST00000512968 ABCA10Q8WWZ4 1543 aa16.58■□□□□ 0.24
RACK1-228ENST00000512968 PBRM1Q86U86 1689 aa16.55■□□□□ 0.24
RACK1-228ENST00000512968 ERCC6L2Q5T890 1561 aa16.55■□□□□ 0.24
RACK1-228ENST00000512968 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
RACK1-228ENST00000512968 ABCA5Q8WWZ7 1642 aa16.53■□□□□ 0.24
RACK1-228ENST00000512968 SUPT5HO00267 1087 aaKnown RBP16.51■□□□□ 0.23
RACK1-228ENST00000512968 NUP160Q12769 1436 aa16.5■□□□□ 0.23
RACK1-228ENST00000512968 WRNQ14191 1432 aaPredicted RBP eCLIP16.5■□□□□ 0.23
RACK1-228ENST00000512968 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
RACK1-228ENST00000512968 ADAMTS12P58397 1594 aa16.45■□□□□ 0.22
RACK1-228ENST00000512968 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
RACK1-228ENST00000512968 ILDR1Q86SU0 546 aaPredicted RBP16.41■□□□□ 0.22
RACK1-228ENST00000512968 PRG4Q92954 1404 aaPredicted RBP16.39■□□□□ 0.21
RACK1-228ENST00000512968 JPH4Q96JJ6 628 aa16.38■□□□□ 0.21
RACK1-228ENST00000512968 SHROOM2Q13796 1616 aa16.37■□□□□ 0.21
RACK1-228ENST00000512968 TOP2BQ02880 1626 aa16.36■□□□□ 0.21
RACK1-228ENST00000512968 ERICH3Q5RHP9 1530 aa16.35■□□□□ 0.21
RACK1-228ENST00000512968 FAM69CQ0P6D2 419 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms