RNA–Protein interactions for RNA: ENST00000626067.1

RACK1-235, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2 BASIC

Gene RACK1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-235ENST00000626067 NISCHQ9Y2I1 1504 aa16.4■□□□□ 0.22
RACK1-235ENST00000626067 DNAJC5BQ9UF47 199 aa16■□□□□ 0.15
RACK1-235ENST00000626067 ABCC9O60706 1549 aa15.77■□□□□ 0.11
RACK1-235ENST00000626067 DNAJC5Q9H3Z4 198 aa15.51■□□□□ 0.07
RACK1-235ENST00000626067 CCDC180Q9P1Z9 1646 aa14.92□□□□□ -0.02
RACK1-235ENST00000626067 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
RACK1-235ENST00000626067 RB1CC1Q8TDY2 1594 aa14.55□□□□□ -0.08
RACK1-235ENST00000626067 TRIM41Q8WV44 630 aa14.37□□□□□ -0.11
RACK1-235ENST00000626067 DCAF8L2P0C7V8 631 aa14.36□□□□□ -0.11
RACK1-235ENST00000626067 CECR2Q9BXF3 1484 aa14.31□□□□□ -0.12
RACK1-235ENST00000626067 NACADO15069 1562 aa14.28□□□□□ -0.12
RACK1-235ENST00000626067 UNC13AQ9UPW8 1703 aa14.28□□□□□ -0.12
RACK1-235ENST00000626067 BICRAQ9NZM4 1560 aa14.15□□□□□ -0.14
RACK1-235ENST00000626067 CC2D2AQ9P2K1 1620 aa14.1□□□□□ -0.15
RACK1-235ENST00000626067 CUX2O14529 1486 aa13.98□□□□□ -0.17
RACK1-235ENST00000626067 EIF4G1Q04637 1599 aaKnown RBP13.85□□□□□ -0.19
RACK1-235ENST00000626067 AEBP2Q6ZN18 517 aaPredicted RBP13.83□□□□□ -0.2
RACK1-235ENST00000626067 MYO15BQ96JP2 1530 aa13.81□□□□□ -0.2
RACK1-235ENST00000626067 SHROOM4Q9ULL8 1493 aa13.77□□□□□ -0.21
RACK1-235ENST00000626067 ERCC6Q03468 1493 aa13.66□□□□□ -0.22
RACK1-235ENST00000626067 SCRIBQ14160 1630 aa13.64□□□□□ -0.23
RACK1-235ENST00000626067 ILDR1Q86SU0 546 aaPredicted RBP13.53□□□□□ -0.24
RACK1-235ENST00000626067 DCAF1Q9Y4B6 1507 aa13.44□□□□□ -0.26
RACK1-235ENST00000626067 ZCCHC6Q5VYS8 1495 aaKnown RBP13.4□□□□□ -0.26
RACK1-235ENST00000626067 TRHP20396 242 aaPredicted RBP13.35□□□□□ -0.27
RACK1-235ENST00000626067 OSCARQ8IYS5 282 aa13.3□□□□□ -0.28
RACK1-235ENST00000626067 NESP48681 1621 aa13.26□□□□□ -0.29
RACK1-235ENST00000626067 NCAPD3P42695 1498 aa13.21□□□□□ -0.3
RACK1-235ENST00000626067 THOC2Q8NI27 1593 aaKnown RBP13.18□□□□□ -0.3
RACK1-235ENST00000626067 CYB5RLQ6IPT4 315 aa13.12□□□□□ -0.31
RACK1-235ENST00000626067 RIMBP3CA6NJZ7 1639 aa13.12□□□□□ -0.31
RACK1-235ENST00000626067 RIMBP3BA6NNM3 1639 aa13.12□□□□□ -0.31
RACK1-235ENST00000626067 RIMBP3Q9UFD9 1639 aa13.12□□□□□ -0.31
RACK1-235ENST00000626067 ATAD2BQ9ULI0 1458 aa13.09□□□□□ -0.31
RACK1-235ENST00000626067 SMARCA2P51531 1590 aa13.08□□□□□ -0.32
RACK1-235ENST00000626067 BAZ1AQ9NRL2 1556 aaPredicted RBP13.08□□□□□ -0.32
RACK1-235ENST00000626067 KIF21AQ7Z4S6 1674 aa13.05□□□□□ -0.32
RACK1-235ENST00000626067 LAMC3Q9Y6N6 1575 aa13□□□□□ -0.33
RACK1-235ENST00000626067 HMGXB3Q12766 1538 aa13□□□□□ -0.33
RACK1-235ENST00000626067 PDS5BQ9NTI5 1447 aa12.99□□□□□ -0.33
RACK1-235ENST00000626067 ARHGEF11O15085 1522 aa12.98□□□□□ -0.33
RACK1-235ENST00000626067 BAZ1BQ9UIG0 1483 aaKnown RBP12.93□□□□□ -0.34
RACK1-235ENST00000626067 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
RACK1-235ENST00000626067 MRC2Q9UBG0 1479 aa12.87□□□□□ -0.35
RACK1-235ENST00000626067 WDR62O43379 1518 aa12.83□□□□□ -0.36
RACK1-235ENST00000626067 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
RACK1-235ENST00000626067 ARAP1Q96P48 1450 aa12.78□□□□□ -0.36
RACK1-235ENST00000626067 PEG3Q9GZU2 1588 aa12.73□□□□□ -0.37
RACK1-235ENST00000626067 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.38
RACK1-235ENST00000626067 KDM4FA0A1W2PPD8 638 aa12.69□□□□□ -0.38
RACK1-235ENST00000626067 SOCS7O14512 581 aa12.68□□□□□ -0.38
RACK1-235ENST00000626067 LMTK3Q96Q04 1460 aa12.66□□□□□ -0.38
RACK1-235ENST00000626067 FANCD2Q9BXW9 1451 aa12.65□□□□□ -0.38
RACK1-235ENST00000626067 MROH2BQ7Z745 1585 aa12.65□□□□□ -0.38
RACK1-235ENST00000626067 FBXO41Q8TF61 875 aa12.65□□□□□ -0.38
RACK1-235ENST00000626067 ILDR2Q71H61 639 aa12.6□□□□□ -0.39
RACK1-235ENST00000626067 URB2Q14146 1524 aaKnown RBP12.59□□□□□ -0.39
RACK1-235ENST00000626067 ZNF608Q9ULD9 1512 aaPredicted RBP12.56□□□□□ -0.4
RACK1-235ENST00000626067 FBLN2P98095 1184 aa12.55□□□□□ -0.4
RACK1-235ENST00000626067 WIZO95785 1651 aa12.51□□□□□ -0.41
RACK1-235ENST00000626067 RSF1Q96T23 1441 aaPredicted RBP12.5□□□□□ -0.41
RACK1-235ENST00000626067 CFTRP13569 1480 aa12.5□□□□□ -0.41
RACK1-235ENST00000626067 CHD1O14646 1710 aa12.48□□□□□ -0.41
RACK1-235ENST00000626067 IFT140Q96RY7 1462 aa12.47□□□□□ -0.41
RACK1-235ENST00000626067 ERCC6L2Q5T890 1561 aa12.43□□□□□ -0.42
RACK1-235ENST00000626067 AQRO60306 1485 aaKnown RBP eCLIP12.41□□□□□ -0.427e-32■■■■■ 82.2
RACK1-235ENST00000626067 EIF4G3O43432 1585 aaKnown RBP12.4□□□□□ -0.42
RACK1-235ENST00000626067 DISP3Q9P2K9 1392 aa12.38□□□□□ -0.43
RACK1-235ENST00000626067 HECW2Q9P2P5 1572 aa12.36□□□□□ -0.43
RACK1-235ENST00000626067 TOPBP1Q92547 1522 aa12.33□□□□□ -0.44
RACK1-235ENST00000626067 PRDM2Q13029 1718 aa12.32□□□□□ -0.44
RACK1-235ENST00000626067 CHMP7Q8WUX9 453 aaPredicted RBP12.31□□□□□ -0.44
RACK1-235ENST00000626067 SYNJ2O15056 1496 aa12.29□□□□□ -0.44
RACK1-235ENST00000626067 ABCC8Q09428 1581 aa12.27□□□□□ -0.44
RACK1-235ENST00000626067 TARBP1Q13395 1621 aaKnown RBP12.27□□□□□ -0.44
RACK1-235ENST00000626067 CLASP1Q7Z460 1538 aa12.26□□□□□ -0.45
RACK1-235ENST00000626067 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
RACK1-235ENST00000626067 GAPVD1Q14C86 1478 aa12.23□□□□□ -0.45
RACK1-235ENST00000626067 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
RACK1-235ENST00000626067 DNMBPQ6XZF7 1577 aa12.22□□□□□ -0.45
RACK1-235ENST00000626067 TOP2AP11388 1531 aaKnown RBP12.21□□□□□ -0.45
RACK1-235ENST00000626067 SNAPC4Q5SXM2 1469 aa12.2□□□□□ -0.46
RACK1-235ENST00000626067 RAD54L2Q9Y4B4 1467 aa12.2□□□□□ -0.46
RACK1-235ENST00000626067 ADGRL1O94910 1474 aa12.18□□□□□ -0.46
RACK1-235ENST00000626067 SOGA1O94964 1423 aa12.18□□□□□ -0.46
RACK1-235ENST00000626067 CCDC88BA6NC98 1476 aa12.17□□□□□ -0.46
RACK1-235ENST00000626067 FAM69CQ0P6D2 419 aa12.17□□□□□ -0.46
RACK1-235ENST00000626067 POLA1P09884 1462 aaPredicted RBP12.16□□□□□ -0.46
RACK1-235ENST00000626067 KIF13AQ9H1H9 1805 aa12.15□□□□□ -0.46
RACK1-235ENST00000626067 MAGI1Q96QZ7 1491 aaPredicted RBP12.1□□□□□ -0.47
RACK1-235ENST00000626067 KDM6BO15054 1643 aa12.1□□□□□ -0.47
RACK1-235ENST00000626067 GRIN2BQ13224 1484 aa12.08□□□□□ -0.48
RACK1-235ENST00000626067 SUPT5HO00267 1087 aaKnown RBP12.05□□□□□ -0.48
RACK1-235ENST00000626067 WDR97A6NE52 1622 aa12.03□□□□□ -0.48
RACK1-235ENST00000626067 FGD5Q6ZNL6 1462 aa12.02□□□□□ -0.49
RACK1-235ENST00000626067 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
RACK1-235ENST00000626067 ABCC10Q5T3U5 1492 aa12.01□□□□□ -0.49
RACK1-235ENST00000626067 PBRM1Q86U86 1689 aa12□□□□□ -0.49
RACK1-235ENST00000626067 TSPOAP1O95153 1857 aa11.99□□□□□ -0.49
RACK1-235ENST00000626067 CEP170Q5SW79 1584 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms