RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C MVP1P40959 511 aaKnown RBP6.26□□□□□ -1.41
SWT1YOR166C CST6P40535 587 aa6.25□□□□□ -1.41
SWT1YOR166C VPS70P47161 811 aa6.25□□□□□ -1.41
SWT1YOR166C RGR1P19263 1082 aa6.22□□□□□ -1.41
SWT1YOR166C CLA4P48562 842 aa6.22□□□□□ -1.41
SWT1YOR166C LAM6Q08001 693 aa6.22□□□□□ -1.41
SWT1YOR166C ERG12P07277 443 aa6.21□□□□□ -1.41
SWT1YOR166C AIR1P40507 360 aaKnown RBP6.21□□□□□ -1.41
SWT1YOR166C GCD11P32481 527 aaKnown RBP6.2□□□□□ -1.42
SWT1YOR166C NPL4P33755 580 aa6.19□□□□□ -1.42
SWT1YOR166C YPR109WQ06104 294 aa6.19□□□□□ -1.42
SWT1YOR166C SPT16P32558 1035 aaKnown RBP6.16□□□□□ -1.42
SWT1YOR166C BRE2P43132 505 aa6.15□□□□□ -1.43
SWT1YOR166C YPL062WQ02781 134 aa6.15□□□□□ -1.43
SWT1YOR166C RRN7P40992 514 aa6.14□□□□□ -1.43
SWT1YOR166C ERF2Q06551 359 aa6.14□□□□□ -1.43
SWT1YOR166C BDP1P46678 594 aa6.13□□□□□ -1.43
SWT1YOR166C CDC4P07834 779 aa6.12□□□□□ -1.43
SWT1YOR166C FRK1Q03002 865 aaPredicted RBP6.12□□□□□ -1.43
SWT1YOR166C KEX2P13134 814 aa6.1□□□□□ -1.43
SWT1YOR166C MOD5P07884 428 aa6.09□□□□□ -1.43
SWT1YOR166C PBS2P08018 668 aa6.09□□□□□ -1.43
SWT1YOR166C PSE1P32337 1089 aaKnown RBP6.09□□□□□ -1.43
SWT1YOR166C CKB1P43639 278 aa6.08□□□□□ -1.44
SWT1YOR166C GCR2Q01722 534 aa6.08□□□□□ -1.44
SWT1YOR166C HED1Q03937 162 aa6.08□□□□□ -1.44
SWT1YOR166C AGE1Q04412 482 aa6.08□□□□□ -1.44
SWT1YOR166C PAT1P25644 796 aaKnown RBP6.07□□□□□ -1.44
SWT1YOR166C PAC1P39946 494 aaKnown RBP6.07□□□□□ -1.44
SWT1YOR166C MET22P32179 357 aa6.04□□□□□ -1.44
SWT1YOR166C CLB5P30283 435 aa6.03□□□□□ -1.44
SWT1YOR166C TUB4P53378 473 aa6.03□□□□□ -1.44
SWT1YOR166C MET32Q12041 191 aa6.03□□□□□ -1.44
SWT1YOR166C SIT4P20604 311 aa6.02□□□□□ -1.45
SWT1YOR166C RTF1P53064 558 aa6.02□□□□□ -1.45
SWT1YOR166C GAR1P28007 205 aaKnown RBP6.01□□□□□ -1.45
SWT1YOR166C DSF2P38213 736 aa6.01□□□□□ -1.45
SWT1YOR166C ENV9Q08651 330 aa6.01□□□□□ -1.45
SWT1YOR166C SAS10Q12136 610 aaPredicted RBP5.99□□□□□ -1.45
SWT1YOR166C MAM3Q12296 706 aa5.99□□□□□ -1.45
SWT1YOR166C AFT1P22149 690 aa5.98□□□□□ -1.45
SWT1YOR166C NUP42P49686 430 aaKnown RBP5.98□□□□□ -1.45
SWT1YOR166C YNL115CP53925 644 aa5.98□□□□□ -1.45
SWT1YOR166C ASH1P34233 588 aa5.97□□□□□ -1.45
SWT1YOR166C IES2P40154 320 aa5.96□□□□□ -1.45
SWT1YOR166C PUS5Q06244 254 aa5.96□□□□□ -1.45
SWT1YOR166C GBP2P25555 427 aaKnown RBP RIP-Chip data5.95□□□□□ -1.46not detected
SWT1YOR166C TPD3P31383 635 aa5.95□□□□□ -1.46
SWT1YOR166C NIS1P53939 407 aa5.94□□□□□ -1.46
SWT1YOR166C YDR444WQ04093 687 aa5.93□□□□□ -1.46
SWT1YOR166C LCB5Q06147 687 aaKnown RBP5.93□□□□□ -1.46
SWT1YOR166C YDL176WQ12027 708 aa5.93□□□□□ -1.46
SWT1YOR166C TEA1P47988 759 aa5.92□□□□□ -1.46
SWT1YOR166C RRD1P40454 393 aaKnown RBP5.9□□□□□ -1.47
SWT1YOR166C HST3P53687 447 aa5.9□□□□□ -1.47
SWT1YOR166C PDC1P06169 563 aaKnown RBP5.89□□□□□ -1.47
SWT1YOR166C DIT2P21595 489 aa5.89□□□□□ -1.47
SWT1YOR166C HXT10P43581 546 aa5.89□□□□□ -1.47
SWT1YOR166C YJR115WP47152 169 aa5.89□□□□□ -1.47
SWT1YOR166C KXD1P53158 218 aa5.89□□□□□ -1.47
SWT1YOR166C FPK1P53739 893 aa5.87□□□□□ -1.47
SWT1YOR166C MSB3P48566 633 aaPredicted RBP5.86□□□□□ -1.47
SWT1YOR166C SYH1Q02875 849 aaKnown RBP5.84□□□□□ -1.47
SWT1YOR166C SLY41P22215 453 aa5.83□□□□□ -1.48
SWT1YOR166C DMA1P38823 416 aa5.82□□□□□ -1.48
SWT1YOR166C RPA14P50106 137 aa5.82□□□□□ -1.48
SWT1YOR166C YPR097WQ06839 1073 aa5.82□□□□□ -1.48
SWT1YOR166C PUS6P53294 404 aa5.8□□□□□ -1.48
SWT1YOR166C SPB4P25808 606 aaPredicted RBP5.8□□□□□ -1.48
SWT1YOR166C MRT4P33201 236 aaKnown RBP5.8□□□□□ -1.48
SWT1YOR166C HST2P53686 357 aa5.8□□□□□ -1.48
SWT1YOR166C YDL206WQ12424 762 aa5.8□□□□□ -1.48
SWT1YOR166C ACO2P39533 789 aa5.79□□□□□ -1.48
SWT1YOR166C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
SWT1YOR166C YMR196WQ04336 1088 aa5.79□□□□□ -1.48
SWT1YOR166C ALR1Q08269 859 aa5.79□□□□□ -1.48
SWT1YOR166C SCJ1P25303 377 aa5.78□□□□□ -1.48
SWT1YOR166C PTK2P47116 818 aaKnown RBP5.78□□□□□ -1.48
SWT1YOR166C TRM1P15565 570 aaKnown RBP5.77□□□□□ -1.49
SWT1YOR166C OPT2Q06593 877 aa5.76□□□□□ -1.49
SWT1YOR166C UGA3P26370 528 aa5.75□□□□□ -1.49
SWT1YOR166C IXR1P33417 597 aa5.74□□□□□ -1.49
SWT1YOR166C TBF1Q02457 562 aa5.74□□□□□ -1.49
SWT1YOR166C KIP2P28743 706 aa5.73□□□□□ -1.49
SWT1YOR166C CAF120P53836 1060 aa5.73□□□□□ -1.49
SWT1YOR166C MMP1Q12372 583 aa5.73□□□□□ -1.49
SWT1YOR166C GLY1P37303 387 aaKnown RBP5.72□□□□□ -1.49
SWT1YOR166C RTT106P40161 455 aa5.72□□□□□ -1.49
SWT1YOR166C NUP85P46673 744 aa5.72□□□□□ -1.49
SWT1YOR166C RSC30P38781 883 aa5.71□□□□□ -1.5
SWT1YOR166C VAC17P25591 423 aa5.7□□□□□ -1.5
SWT1YOR166C GLN1P32288 370 aaKnown RBP5.7□□□□□ -1.5
SWT1YOR166C ESS1P22696 170 aa5.69□□□□□ -1.5
SWT1YOR166C YLR346CQ06139 101 aa5.69□□□□□ -1.5
SWT1YOR166C YJU3P28321 313 aa5.68□□□□□ -1.5
SWT1YOR166C TY1A-BLQ12266 440 aa5.68□□□□□ -1.5
SWT1YOR166C SRF1Q12516 437 aa5.68□□□□□ -1.5
SWT1YOR166C YBL086CP38177 466 aa5.67□□□□□ -1.5
SWT1YOR166C YIR007WP40566 764 aa5.67□□□□□ -1.5
SWT1YOR166C KTR1P27810 393 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms