Protein–RNA interactions for Protein: P46678

BDP1, Transcription factor TFIIIB component B'', yeastyeast

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BDP1P46678 YML009W-BYML009W-B 477 nt24.61■■□□□ 1.53
BDP1P46678 NSR1YGR159C 1245 nt24.52■■□□□ 1.52
BDP1P46678 NOP1YDL014W 984 nt23.91■■□□□ 1.42
BDP1P46678 YKL036CYKL036C 393 nt22.06■■□□□ 1.12
BDP1P46678 MDJ1YFL016C 1536 nt21.8■■□□□ 1.08
BDP1P46678 Q0297Q0297 156 nt20.98■□□□□ 0.95
BDP1P46678 SRX1YKL086W 384 nt20.93■□□□□ 0.94
BDP1P46678 YJL027CYJL027C 417 nt20.55■□□□□ 0.88
BDP1P46678 SCS3YGL126W 1143 nt20.07■□□□□ 0.8
BDP1P46678 YCR051WYCR051W 669 nt19.8■□□□□ 0.76
BDP1P46678 DBP2YNL112W 1641 nt19.33■□□□□ 0.68
BDP1P46678 YOL085CYOL085C 342 nt19.12■□□□□ 0.65
BDP1P46678 TRN1tP(UGG)A 72 nt18.96■□□□□ 0.63
BDP1P46678 SUF9tP(UGG)F 72 nt18.96■□□□□ 0.63
BDP1P46678 SUF8tP(UGG)H 72 nt18.96■□□□□ 0.63
BDP1P46678 tP(UGG)LtP(UGG)L 72 nt18.96■□□□□ 0.63
BDP1P46678 SUF7tP(UGG)M 72 nt18.96■□□□□ 0.63
BDP1P46678 tP(UGG)N1tP(UGG)N1 72 nt18.96■□□□□ 0.63
BDP1P46678 tP(UGG)N2tP(UGG)N2 72 nt18.96■□□□□ 0.63
BDP1P46678 tP(UGG)O1tP(UGG)O1 72 nt18.96■□□□□ 0.63
BDP1P46678 SUF11tP(UGG)O2 72 nt18.96■□□□□ 0.63
BDP1P46678 RPP1BYDL130W 321 nt18.81■□□□□ 0.6
BDP1P46678 PKP1YIL042C 1185 nt18.8■□□□□ 0.6
BDP1P46678 CCC1YLR220W 969 nt18.69■□□□□ 0.58
BDP1P46678 YBR190WYBR190W 312 nt18.6■□□□□ 0.57
BDP1P46678 RTC3YHR087W 336 nt18.12■□□□□ 0.49
BDP1P46678 RVS167YDR388W 1449 nt18.07■□□□□ 0.48
BDP1P46678 SCJ1YMR214W 1134 nt18.06■□□□□ 0.48
BDP1P46678 PET122YER153C 765 nt17.97■□□□□ 0.47
BDP1P46678 ATS1YAL020C 1002 nt17.94■□□□□ 0.46
BDP1P46678 tP(UGG)O3tP(UGG)O3 72 nt17.91■□□□□ 0.46
BDP1P46678 SCR1SCR1 522 nt17.72■□□□□ 0.43
BDP1P46678 SHR5YOL110W 714 nt17.49■□□□□ 0.39
BDP1P46678 RRN5YLR141W 1092 nt17.44■□□□□ 0.38
BDP1P46678 YDJ1YNL064C 1230 nt17.35■□□□□ 0.37
BDP1P46678 YER088W-BYER088W-B 147 nt17.11■□□□□ 0.33
BDP1P46678 RSB1YOR049C 1065 nt17.04■□□□□ 0.32
BDP1P46678 URN1YPR152C 1398 nt17■□□□□ 0.31
BDP1P46678 DEP1YAL013W 1218 nt16.96■□□□□ 0.31
BDP1P46678 PUT4YOR348C 1884 nt16.95■□□□□ 0.3
BDP1P46678 GAR1YHR089C 618 nt16.91■□□□□ 0.3
BDP1P46678 OPI9YLR338W 858 nt16.78■□□□□ 0.28
BDP1P46678 RPN10YHR200W 807 nt16.72■□□□□ 0.27
BDP1P46678 YNL208WYNL208W 600 nt16.71■□□□□ 0.27
BDP1P46678 SAH1YER043C 1350 nt16.66■□□□□ 0.26
BDP1P46678 PST2YDR032C 597 nt16.64■□□□□ 0.25
BDP1P46678 ARE1YCR048W 1833 nt16.62■□□□□ 0.25
BDP1P46678 YHR049C-AYHR049C-A 297 nt16.38■□□□□ 0.21
BDP1P46678 TIR1YER011W 765 nt16.37■□□□□ 0.21
BDP1P46678 POA1YBR022W 534 nt16.37■□□□□ 0.21
BDP1P46678 PUN1YLR414C 792 nt16.28■□□□□ 0.2
BDP1P46678 SSA3YBL075C 1950 nt16.24■□□□□ 0.19
BDP1P46678 YJR018WYJR018W 363 nt16.21■□□□□ 0.19
BDP1P46678 SSA1YAL005C 1929 nt16.19■□□□□ 0.18
BDP1P46678 PTC2YER089C 1395 nt16.07■□□□□ 0.16
BDP1P46678 BSC6YOL137W 1494 nt16.04■□□□□ 0.16
BDP1P46678 YJR120WYJR120W 351 nt16.04■□□□□ 0.16
BDP1P46678 SRB2YHR041C 633 nt15.97■□□□□ 0.15
BDP1P46678 SHU1YHL006C 453 nt15.96■□□□□ 0.15
BDP1P46678 BUD23YCR047C 828 nt15.95■□□□□ 0.14
BDP1P46678 YKL097CYKL097C 411 nt15.92■□□□□ 0.14
BDP1P46678 NAB2YGL122C 1578 nt15.87■□□□□ 0.13
BDP1P46678 RPP2BYDR382W 333 nt15.85■□□□□ 0.13
BDP1P46678 FIS1YIL065C 468 nt15.7■□□□□ 0.1
BDP1P46678 YAL037C-BYAL037C-B 975 nt15.7■□□□□ 0.1
BDP1P46678 DAL1YIR027C 1383 nt15.67■□□□□ 0.1
BDP1P46678 INM2YDR287W 879 nt15.64■□□□□ 0.09
BDP1P46678 WWM1YFL010C 636 nt15.64■□□□□ 0.09
BDP1P46678 BDH2YAL061W 1254 nt15.57■□□□□ 0.08
BDP1P46678 FPR4YLR449W 1179 nt15.56■□□□□ 0.08
BDP1P46678 YGR021WYGR021W 873 nt15.55■□□□□ 0.08
BDP1P46678 PHO4YFR034C 939 nt15.53■□□□□ 0.08
BDP1P46678 HOM6YJR139C 1080 nt15.52■□□□□ 0.08
BDP1P46678 YBL100CYBL100C 315 nt15.49■□□□□ 0.07
BDP1P46678 MNP1YGL068W 585 nt15.42■□□□□ 0.06
BDP1P46678 YFL021C-AYFL021C-A 855 nt15.41■□□□□ 0.06
BDP1P46678 SPT5YML010W 3192 nt15.38■□□□□ 0.05
BDP1P46678 YOR139CYOR139C 393 nt15.38■□□□□ 0.05
BDP1P46678 LSM3YLR438C-A 270 nt15.37■□□□□ 0.05
BDP1P46678 FUN26YAL022C 1554 nt15.31■□□□□ 0.04
BDP1P46678 RKM5YLR137W 1104 nt15.28■□□□□ 0.04
BDP1P46678 YPS1YLR120C 1710 nt15.25■□□□□ 0.03
BDP1P46678 TRM9YML014W 840 nt15.24■□□□□ 0.03
BDP1P46678 YDR095CYDR095C 411 nt15.16■□□□□ 0.02
BDP1P46678 YOL037CYOL037C 354 nt15.16■□□□□ 0.02
BDP1P46678 CCT6YDR188W 1641 nt15.15■□□□□ 0.02
BDP1P46678 NPL3YDR432W 1245 nt15.15■□□□□ 0.02
BDP1P46678 MEP2YNL142W 1500 nt15.07■□□□□ 0
BDP1P46678 ALF1YNL148C 765 nt15.05■□□□□ -0
BDP1P46678 YHR165W-AYHR165W-A 312 nt15.03■□□□□ -0
BDP1P46678 SUF2tP(AGG)C 72 nt14.97□□□□□ -0.01
BDP1P46678 SUF10tP(AGG)N 72 nt14.97□□□□□ -0.01
BDP1P46678 SIS1YNL007C 1059 nt14.9□□□□□ -0.02
BDP1P46678 PTP1YDL230W 1008 nt14.85□□□□□ -0.03
BDP1P46678 RPP2AYOL039W 321 nt14.85□□□□□ -0.03
BDP1P46678 DCW1YKL046C 1350 nt14.83□□□□□ -0.04
BDP1P46678 YLR281CYLR281C 468 nt14.82□□□□□ -0.04
BDP1P46678 WHI5YOR083W 888 nt14.76□□□□□ -0.05
BDP1P46678 SSA4YER103W 1929 nt14.76□□□□□ -0.05
BDP1P46678 tM(CAU)CtM(CAU)C 72 nt14.74□□□□□ -0.05
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms