RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C MTC1P47018 478 aaKnown RBP12.21□□□□□ -0.45
SWT1YOR166C FAP1P53971 965 aa11.26□□□□□ -0.61
SWT1YOR166C DRS1P32892 752 aaKnown RBP11.01□□□□□ -0.65
SWT1YOR166C PRY3P47033 881 aa10.62□□□□□ -0.71
SWT1YOR166C PRI1P10363 409 aa10.5□□□□□ -0.73
SWT1YOR166C AAD16Q02895 342 aa10.44□□□□□ -0.74
SWT1YOR166C YCK3P39962 524 aa10.18□□□□□ -0.78
SWT1YOR166C ISW2Q08773 1120 aa10.14□□□□□ -0.79
SWT1YOR166C RPG1P38249 964 aaKnown RBP10.05□□□□□ -0.8
SWT1YOR166C HAA1Q12753 694 aaKnown RBP9.99□□□□□ -0.81
SWT1YOR166C TSR3Q12094 313 aaKnown RBP9.87□□□□□ -0.83
SWT1YOR166C DIP2Q12220 943 aaPredicted RBP9.79□□□□□ -0.84
SWT1YOR166C RSE1Q04693 1361 aaKnown RBP9.54□□□□□ -0.88
SWT1YOR166C MRPL32P25348 183 aa9.45□□□□□ -0.9
SWT1YOR166C AVT3P36062 692 aa9.4□□□□□ -0.9
SWT1YOR166C RPL17AP05740 184 aaKnown RBP9.26□□□□□ -0.93
SWT1YOR166C RPL17BP46990 184 aaKnown RBP9.26□□□□□ -0.93
SWT1YOR166C REB1P21538 810 aa9.22□□□□□ -0.93
SWT1YOR166C YGL015CP33199 130 aa9.18□□□□□ -0.94
SWT1YOR166C CDC27P38042 758 aa8.99□□□□□ -0.97
SWT1YOR166C BFR2Q06631 534 aaKnown RBP8.97□□□□□ -0.97
SWT1YOR166C SPT21P35209 758 aa8.93□□□□□ -0.98
SWT1YOR166C YKR023WP36119 530 aaKnown RBP8.9□□□□□ -0.98
SWT1YOR166C UBP10P53874 792 aaPredicted RBP8.77□□□□□ -1.01
SWT1YOR166C MAP2P38174 421 aaKnown RBP8.73□□□□□ -1.01
SWT1YOR166C TFC8Q12308 588 aa8.7□□□□□ -1.02
SWT1YOR166C HOP09932 586 aa8.65□□□□□ -1.02
SWT1YOR166C DCD1P06773 312 aa8.62□□□□□ -1.03
SWT1YOR166C BUD31P25337 157 aaPredicted RBP8.6□□□□□ -1.03
SWT1YOR166C RIM101P33400 625 aa8.54□□□□□ -1.04
SWT1YOR166C SCY1P53009 804 aa8.46□□□□□ -1.06
SWT1YOR166C BCH2P36122 765 aa8.39□□□□□ -1.07
SWT1YOR166C SLX5P32828 619 aaKnown RBP8.37□□□□□ -1.07
SWT1YOR166C TGL3P40308 642 aa8.37□□□□□ -1.07
SWT1YOR166C TIF4632P39936 914 aaKnown RBP8.35□□□□□ -1.07
SWT1YOR166C OXP1P28273 1286 aa8.24□□□□□ -1.09
SWT1YOR166C UBP9P39967 754 aa8.18□□□□□ -1.1
SWT1YOR166C EPS1P40557 701 aa8.14□□□□□ -1.11
SWT1YOR166C BDF1P35817 686 aa8.13□□□□□ -1.11
SWT1YOR166C SIS1P25294 352 aaKnown RBP8.12□□□□□ -1.11
SWT1YOR166C MST1P07236 462 aa8.05□□□□□ -1.12
SWT1YOR166C PTP3P40048 928 aa8.01□□□□□ -1.13
SWT1YOR166C YIL055CP40523 627 aaKnown RBP8□□□□□ -1.13
SWT1YOR166C NSR1P27476 414 aaKnown RBP RIP-Chip data7.96□□□□□ -1.14not detected
SWT1YOR166C RSM7P47150 247 aa7.96□□□□□ -1.14
SWT1YOR166C AI2P03876 854 aa7.91□□□□□ -1.14
SWT1YOR166C YOR238WQ08634 303 aa7.91□□□□□ -1.14
SWT1YOR166C BBC1P47068 1157 aa7.89□□□□□ -1.15
SWT1YOR166C YBL029C-AQ3E756 94 aa7.88□□□□□ -1.15
SWT1YOR166C YAH1Q12184 172 aaKnown RBP7.84□□□□□ -1.15
SWT1YOR166C VNX1P42839 908 aa7.82□□□□□ -1.16
SWT1YOR166C YAP5P40574 245 aa7.81□□□□□ -1.16
SWT1YOR166C YLR271WQ06152 274 aa7.79□□□□□ -1.16
SWT1YOR166C TFA1P36100 482 aa7.74□□□□□ -1.17
SWT1YOR166C PSD2P53037 1138 aaKnown RBP7.73□□□□□ -1.17
SWT1YOR166C SPP1Q03012 353 aa7.69□□□□□ -1.18
SWT1YOR166C WSC3Q12215 556 aa7.67□□□□□ -1.18
SWT1YOR166C TIF11P38912 153 aaKnown RBP7.63□□□□□ -1.19
SWT1YOR166C AIR2Q12476 344 aaKnown RBP7.62□□□□□ -1.19
SWT1YOR166C FKH1P40466 484 aa7.6□□□□□ -1.19
SWT1YOR166C GTT3P39996 337 aa7.59□□□□□ -1.19
SWT1YOR166C MRM1P25270 412 aa7.59□□□□□ -1.2
SWT1YOR166C SSP1P38871 571 aa7.57□□□□□ -1.2
SWT1YOR166C PIB1Q06651 286 aa7.56□□□□□ -1.2
SWT1YOR166C IOC2Q12072 812 aa7.55□□□□□ -1.2
SWT1YOR166C ULI1P43604 169 aa7.51□□□□□ -1.21
SWT1YOR166C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
SWT1YOR166C LDB19Q12502 818 aa7.51□□□□□ -1.21
SWT1YOR166C VPS29P38759 282 aa7.49□□□□□ -1.21
SWT1YOR166C CST9Q06032 482 aa7.48□□□□□ -1.21
SWT1YOR166C YJL171CP46992 396 aa7.47□□□□□ -1.21
SWT1YOR166C MSB4Q12317 492 aa7.47□□□□□ -1.21
SWT1YOR166C YMR1P47147 688 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22not detected
SWT1YOR166C DBP1P24784 617 aaKnown RBP7.43□□□□□ -1.22
SWT1YOR166C MGA2P40578 1113 aa7.43□□□□□ -1.22
SWT1YOR166C YOL036WQ08206 761 aa7.43□□□□□ -1.22
SWT1YOR166C EAP1P36041 632 aaKnown RBP7.42□□□□□ -1.22
SWT1YOR166C STS1P38637 319 aa7.41□□□□□ -1.22
SWT1YOR166C RTG3P38165 486 aa7.4□□□□□ -1.22
SWT1YOR166C SET4P42948 560 aa7.39□□□□□ -1.23
SWT1YOR166C SAM3Q08986 587 aa7.39□□□□□ -1.23
SWT1YOR166C TRP5P00931 707 aaKnown RBP7.38□□□□□ -1.23
SWT1YOR166C VMA1P17255 1071 aaKnown RBP7.38□□□□□ -1.23
SWT1YOR166C YFR006WP43590 535 aa7.38□□□□□ -1.23
SWT1YOR166C BMT6Q12291 365 aa7.38□□□□□ -1.23
SWT1YOR166C RTG1P32607 177 aa7.35□□□□□ -1.23
SWT1YOR166C RCR1P38212 213 aa7.34□□□□□ -1.23
SWT1YOR166C SEC61P32915 480 aa7.31□□□□□ -1.24
SWT1YOR166C YNL035CP53962 389 aaKnown RBP7.31□□□□□ -1.24
SWT1YOR166C NCR1Q12200 1170 aa7.31□□□□□ -1.24
SWT1YOR166C DAN4P47179 1161 aa7.25□□□□□ -1.25
SWT1YOR166C ABP1P15891 592 aaKnown RBP7.21□□□□□ -1.25
SWT1YOR166C JIP4Q03361 876 aa7.2□□□□□ -1.26
SWT1YOR166C GYP5Q12344 894 aa7.2□□□□□ -1.26
SWT1YOR166C HTA1P04911 132 aaKnown RBP7.15□□□□□ -1.26
SWT1YOR166C HTA2P04912 132 aa7.15□□□□□ -1.26
SWT1YOR166C DCW1P36091 449 aa7.14□□□□□ -1.27
SWT1YOR166C YDL129WQ07555 291 aa7.14□□□□□ -1.27
SWT1YOR166C SAP30P38429 201 aa7.13□□□□□ -1.27
SWT1YOR166C TFG1P41895 735 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms