Protein–RNA interactions for Protein: P40959

MVP1, Sorting nexin MVP1, yeastyeast

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MVP1P40959 YML009W-BYML009W-B 477 nt20.99■□□□□ 0.95
MVP1P40959 NSR1YGR159C 1245 nt20.88■□□□□ 0.93
MVP1P40959 NOP1YDL014W 984 nt20.39■□□□□ 0.85
MVP1P40959 MDJ1YFL016C 1536 nt19.29■□□□□ 0.68
MVP1P40959 YKL036CYKL036C 393 nt18.78■□□□□ 0.6
MVP1P40959 Q0297Q0297 156 nt17.82■□□□□ 0.44
MVP1P40959 SRX1YKL086W 384 nt17.81■□□□□ 0.44
MVP1P40959 YJL027CYJL027C 417 nt17.65■□□□□ 0.42
MVP1P40959 SCS3YGL126W 1143 nt17.07■□□□□ 0.32
MVP1P40959 YCR051WYCR051W 669 nt16.92■□□□□ 0.3
MVP1P40959 DBP2YNL112W 1641 nt16.75■□□□□ 0.27
MVP1P40959 YBR190WYBR190W 312 nt16.53■□□□□ 0.24
MVP1P40959 SSA3YBL075C 1950 nt16.29■□□□□ 0.2
MVP1P40959 YOL085CYOL085C 342 nt16.28■□□□□ 0.2
MVP1P40959 RTC3YHR087W 336 nt16.17■□□□□ 0.18
MVP1P40959 TRN1tP(UGG)A 72 nt16.11■□□□□ 0.17
MVP1P40959 SUF9tP(UGG)F 72 nt16.11■□□□□ 0.17
MVP1P40959 SUF8tP(UGG)H 72 nt16.11■□□□□ 0.17
MVP1P40959 tP(UGG)LtP(UGG)L 72 nt16.11■□□□□ 0.17
MVP1P40959 SUF7tP(UGG)M 72 nt16.11■□□□□ 0.17
MVP1P40959 tP(UGG)N1tP(UGG)N1 72 nt16.11■□□□□ 0.17
MVP1P40959 tP(UGG)N2tP(UGG)N2 72 nt16.11■□□□□ 0.17
MVP1P40959 tP(UGG)O1tP(UGG)O1 72 nt16.11■□□□□ 0.17
MVP1P40959 SUF11tP(UGG)O2 72 nt16.11■□□□□ 0.17
MVP1P40959 PKP1YIL042C 1185 nt16.06■□□□□ 0.16
MVP1P40959 RPP1BYDL130W 321 nt16.01■□□□□ 0.15
MVP1P40959 CCC1YLR220W 969 nt16■□□□□ 0.15
MVP1P40959 Q0182Q0182 405 nt15.71■□□□□ 0.11
MVP1P40959 MOT3YMR070W 1473 nt15.67■□□□□ 0.1
MVP1P40959 PUT4YOR348C 1884 nt15.6■□□□□ 0.09
MVP1P40959 RVS167YDR388W 1449 nt15.51■□□□□ 0.07
MVP1P40959 SCJ1YMR214W 1134 nt15.42■□□□□ 0.06
MVP1P40959 PET122YER153C 765 nt15.3■□□□□ 0.04
MVP1P40959 ATS1YAL020C 1002 nt15.26■□□□□ 0.03
MVP1P40959 tP(UGG)O3tP(UGG)O3 72 nt15.25■□□□□ 0.03
MVP1P40959 YGR139WYGR139W 339 nt15.19■□□□□ 0.02
MVP1P40959 SCR1SCR1 522 nt15.12■□□□□ 0.01
MVP1P40959 ARE1YCR048W 1833 nt15.11■□□□□ 0.01
MVP1P40959 POA1YBR022W 534 nt15.07■□□□□ 0
MVP1P40959 YHR049C-AYHR049C-A 297 nt14.95□□□□□ -0.02
MVP1P40959 SAH1YER043C 1350 nt14.92□□□□□ -0.02
MVP1P40959 BSC6YOL137W 1494 nt14.89□□□□□ -0.03
MVP1P40959 URN1YPR152C 1398 nt14.88□□□□□ -0.03
MVP1P40959 SHR5YOL110W 714 nt14.88□□□□□ -0.03
MVP1P40959 RRN5YLR141W 1092 nt14.86□□□□□ -0.03
MVP1P40959 OPI9YLR338W 858 nt14.78□□□□□ -0.04
MVP1P40959 DEP1YAL013W 1218 nt14.73□□□□□ -0.05
MVP1P40959 YDJ1YNL064C 1230 nt14.73□□□□□ -0.05
MVP1P40959 SPT5YML010W 3192 nt14.68□□□□□ -0.06
MVP1P40959 YER088W-BYER088W-B 147 nt14.57□□□□□ -0.08
MVP1P40959 NME1NME1 340 nt14.56□□□□□ -0.08
MVP1P40959 RSB1YOR049C 1065 nt14.55□□□□□ -0.08
MVP1P40959 SSA4YER103W 1929 nt14.53□□□□□ -0.08
MVP1P40959 BUD23YCR047C 828 nt14.53□□□□□ -0.08
MVP1P40959 GAR1YHR089C 618 nt14.44□□□□□ -0.1
MVP1P40959 RPN10YHR200W 807 nt14.44□□□□□ -0.1
MVP1P40959 YNL208WYNL208W 600 nt14.34□□□□□ -0.11
MVP1P40959 PUN1YLR414C 792 nt14.33□□□□□ -0.12
MVP1P40959 PTC2YER089C 1395 nt14.33□□□□□ -0.12
MVP1P40959 NAB2YGL122C 1578 nt14.18□□□□□ -0.14
MVP1P40959 PST2YDR032C 597 nt14.14□□□□□ -0.15
MVP1P40959 YJR018WYJR018W 363 nt14.13□□□□□ -0.15
MVP1P40959 MEP2YNL142W 1500 nt14.02□□□□□ -0.16
MVP1P40959 BDF1YLR399C 2061 nt14.02□□□□□ -0.17
MVP1P40959 FIS1YIL065C 468 nt14.01□□□□□ -0.17
MVP1P40959 TIR1YER011W 765 nt13.95□□□□□ -0.18
MVP1P40959 DAL1YIR027C 1383 nt13.89□□□□□ -0.19
MVP1P40959 FPR4YLR449W 1179 nt13.89□□□□□ -0.19
MVP1P40959 YJR120WYJR120W 351 nt13.85□□□□□ -0.19
MVP1P40959 DCW1YKL046C 1350 nt13.84□□□□□ -0.19
MVP1P40959 CSM2YIL132C 642 nt13.84□□□□□ -0.19
MVP1P40959 TAT1YBR069C 1860 nt13.82□□□□□ -0.2
MVP1P40959 SSA1YAL005C 1929 nt13.8□□□□□ -0.2
MVP1P40959 PHO4YFR034C 939 nt13.79□□□□□ -0.2
MVP1P40959 YPS1YLR120C 1710 nt13.75□□□□□ -0.21
MVP1P40959 INM2YDR287W 879 nt13.66□□□□□ -0.22
MVP1P40959 YHR165W-AYHR165W-A 312 nt13.66□□□□□ -0.22
MVP1P40959 RPP2BYDR382W 333 nt13.62□□□□□ -0.23
MVP1P40959 EMI2YDR516C 1503 nt13.59□□□□□ -0.23
MVP1P40959 SHU1YHL006C 453 nt13.58□□□□□ -0.24
MVP1P40959 YBR220CYBR220C 1683 nt13.58□□□□□ -0.24
MVP1P40959 YDR095CYDR095C 411 nt13.56□□□□□ -0.24
MVP1P40959 SRB2YHR041C 633 nt13.56□□□□□ -0.24
MVP1P40959 YKL097CYKL097C 411 nt13.56□□□□□ -0.24
MVP1P40959 PAU21YOR394W 495 nt13.56□□□□□ -0.24
MVP1P40959 PAU22YPL282C 495 nt13.56□□□□□ -0.24
MVP1P40959 YBL100CYBL100C 315 nt13.5□□□□□ -0.25
MVP1P40959 YMR090WYMR090W 684 nt13.48□□□□□ -0.25
MVP1P40959 PAC11YDR488C 1602 nt13.45□□□□□ -0.26
MVP1P40959 YDL221WYDL221W 552 nt13.43□□□□□ -0.26
MVP1P40959 YAL037C-BYAL037C-B 975 nt13.41□□□□□ -0.26
MVP1P40959 ARO7YPR060C 771 nt13.4□□□□□ -0.26
MVP1P40959 CAC2YML102W 1407 nt13.39□□□□□ -0.27
MVP1P40959 SDH1YKL148C 1923 nt13.39□□□□□ -0.27
MVP1P40959 PTP1YDL230W 1008 nt13.35□□□□□ -0.27
MVP1P40959 WWM1YFL010C 636 nt13.34□□□□□ -0.27
MVP1P40959 FUN26YAL022C 1554 nt13.3□□□□□ -0.28
MVP1P40959 RPP2AYOL039W 321 nt13.29□□□□□ -0.28
MVP1P40959 BDH2YAL061W 1254 nt13.26□□□□□ -0.29
MVP1P40959 ALF1YNL148C 765 nt13.24□□□□□ -0.29
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms