Protein–RNA interactions for Protein: P43132

BRE2, COMPASS component BRE2, yeastyeast

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE2P43132 YML009W-BYML009W-B 477 nt22.86■■□□□ 1.25
BRE2P43132 NSR1YGR159C 1245 nt22.52■■□□□ 1.2
BRE2P43132 NOP1YDL014W 984 nt22.12■■□□□ 1.13
BRE2P43132 YKL036CYKL036C 393 nt20.59■□□□□ 0.89
BRE2P43132 MDJ1YFL016C 1536 nt20.06■□□□□ 0.8
BRE2P43132 Q0297Q0297 156 nt19.47■□□□□ 0.71
BRE2P43132 SRX1YKL086W 384 nt19.4■□□□□ 0.7
BRE2P43132 YJL027CYJL027C 417 nt19.25■□□□□ 0.67
BRE2P43132 SCS3YGL126W 1143 nt18.88■□□□□ 0.61
BRE2P43132 YCR051WYCR051W 669 nt18.45■□□□□ 0.54
BRE2P43132 YOL085CYOL085C 342 nt17.88■□□□□ 0.45
BRE2P43132 DBP2YNL112W 1641 nt17.79■□□□□ 0.44
BRE2P43132 PKP1YIL042C 1185 nt17.67■□□□□ 0.42
BRE2P43132 TRN1tP(UGG)A 72 nt17.52■□□□□ 0.4
BRE2P43132 SUF9tP(UGG)F 72 nt17.52■□□□□ 0.4
BRE2P43132 SUF8tP(UGG)H 72 nt17.52■□□□□ 0.4
BRE2P43132 tP(UGG)LtP(UGG)L 72 nt17.52■□□□□ 0.4
BRE2P43132 SUF7tP(UGG)M 72 nt17.52■□□□□ 0.4
BRE2P43132 tP(UGG)N1tP(UGG)N1 72 nt17.52■□□□□ 0.4
BRE2P43132 tP(UGG)N2tP(UGG)N2 72 nt17.52■□□□□ 0.4
BRE2P43132 tP(UGG)O1tP(UGG)O1 72 nt17.52■□□□□ 0.4
BRE2P43132 SUF11tP(UGG)O2 72 nt17.52■□□□□ 0.4
BRE2P43132 RPP1BYDL130W 321 nt17.48■□□□□ 0.39
BRE2P43132 CCC1YLR220W 969 nt17.38■□□□□ 0.37
BRE2P43132 YBR190WYBR190W 312 nt16.94■□□□□ 0.3
BRE2P43132 ATS1YAL020C 1002 nt16.87■□□□□ 0.29
BRE2P43132 PET122YER153C 765 nt16.77■□□□□ 0.28
BRE2P43132 SCJ1YMR214W 1134 nt16.72■□□□□ 0.27
BRE2P43132 RTC3YHR087W 336 nt16.61■□□□□ 0.25
BRE2P43132 tP(UGG)O3tP(UGG)O3 72 nt16.6■□□□□ 0.25
BRE2P43132 RVS167YDR388W 1449 nt16.57■□□□□ 0.24
BRE2P43132 SCR1SCR1 522 nt16.47■□□□□ 0.23
BRE2P43132 RRN5YLR141W 1092 nt16.27■□□□□ 0.2
BRE2P43132 SHR5YOL110W 714 nt16.08■□□□□ 0.16
BRE2P43132 YDJ1YNL064C 1230 nt16.01■□□□□ 0.15
BRE2P43132 YER088W-BYER088W-B 147 nt15.95■□□□□ 0.14
BRE2P43132 RSB1YOR049C 1065 nt15.94■□□□□ 0.14
BRE2P43132 GAR1YHR089C 618 nt15.71■□□□□ 0.11
BRE2P43132 DEP1YAL013W 1218 nt15.7■□□□□ 0.1
BRE2P43132 PST2YDR032C 597 nt15.62■□□□□ 0.09
BRE2P43132 URN1YPR152C 1398 nt15.62■□□□□ 0.09
BRE2P43132 PUT4YOR348C 1884 nt15.38■□□□□ 0.05
BRE2P43132 OPI9YLR338W 858 nt15.34■□□□□ 0.05
BRE2P43132 YNL208WYNL208W 600 nt15.34■□□□□ 0.05
BRE2P43132 RPN10YHR200W 807 nt15.29■□□□□ 0.04
BRE2P43132 SAH1YER043C 1350 nt15.28■□□□□ 0.04
BRE2P43132 ARE1YCR048W 1833 nt15.16■□□□□ 0.02
BRE2P43132 TIR1YER011W 765 nt15.16■□□□□ 0.02
BRE2P43132 YKL097CYKL097C 411 nt15.02■□□□□ -0
BRE2P43132 SSA1YAL005C 1929 nt15.02□□□□□ -0.01
BRE2P43132 SHU1YHL006C 453 nt15.01□□□□□ -0.01
BRE2P43132 YHR049C-AYHR049C-A 297 nt14.95□□□□□ -0.02
BRE2P43132 POA1YBR022W 534 nt14.92□□□□□ -0.02
BRE2P43132 SRB2YHR041C 633 nt14.91□□□□□ -0.02
BRE2P43132 YJR018WYJR018W 363 nt14.88□□□□□ -0.03
BRE2P43132 PUN1YLR414C 792 nt14.85□□□□□ -0.03
BRE2P43132 YJR120WYJR120W 351 nt14.81□□□□□ -0.04
BRE2P43132 YAL037C-BYAL037C-B 975 nt14.8□□□□□ -0.04
BRE2P43132 PTC2YER089C 1395 nt14.72□□□□□ -0.05
BRE2P43132 BUD23YCR047C 828 nt14.61□□□□□ -0.07
BRE2P43132 BSC6YOL137W 1494 nt14.57□□□□□ -0.08
BRE2P43132 WWM1YFL010C 636 nt14.57□□□□□ -0.08
BRE2P43132 RPP2BYDR382W 333 nt14.52□□□□□ -0.09
BRE2P43132 YOR139CYOR139C 393 nt14.5□□□□□ -0.09
BRE2P43132 MNP1YGL068W 585 nt14.46□□□□□ -0.09
BRE2P43132 NAB2YGL122C 1578 nt14.45□□□□□ -0.1
BRE2P43132 HOM6YJR139C 1080 nt14.43□□□□□ -0.1
BRE2P43132 SSA3YBL075C 1950 nt14.42□□□□□ -0.1
BRE2P43132 YGR021WYGR021W 873 nt14.37□□□□□ -0.11
BRE2P43132 FIS1YIL065C 468 nt14.37□□□□□ -0.11
BRE2P43132 BDH2YAL061W 1254 nt14.32□□□□□ -0.12
BRE2P43132 FPR4YLR449W 1179 nt14.31□□□□□ -0.12
BRE2P43132 DAL1YIR027C 1383 nt14.3□□□□□ -0.12
BRE2P43132 INM2YDR287W 879 nt14.26□□□□□ -0.13
BRE2P43132 NPL3YDR432W 1245 nt14.24□□□□□ -0.13
BRE2P43132 YFL021C-AYFL021C-A 855 nt14.23□□□□□ -0.13
BRE2P43132 YBL100CYBL100C 315 nt14.22□□□□□ -0.13
BRE2P43132 PHO4YFR034C 939 nt14.21□□□□□ -0.13
BRE2P43132 RKM5YLR137W 1104 nt14.21□□□□□ -0.13
BRE2P43132 LSM3YLR438C-A 270 nt14.1□□□□□ -0.15
BRE2P43132 YOL037CYOL037C 354 nt14.1□□□□□ -0.15
BRE2P43132 FUN26YAL022C 1554 nt14.07□□□□□ -0.16
BRE2P43132 TRM9YML014W 840 nt13.99□□□□□ -0.17
BRE2P43132 tM(CAU)CtM(CAU)C 72 nt13.89□□□□□ -0.19
BRE2P43132 IMT4tM(CAU)E 72 nt13.89□□□□□ -0.19
BRE2P43132 IMT3tM(CAU)J3 72 nt13.89□□□□□ -0.19
BRE2P43132 IMT1tM(CAU)O1 72 nt13.89□□□□□ -0.19
BRE2P43132 IMT2tM(CAU)P 72 nt13.89□□□□□ -0.19
BRE2P43132 YPS1YLR120C 1710 nt13.88□□□□□ -0.19
BRE2P43132 CCT6YDR188W 1641 nt13.87□□□□□ -0.19
BRE2P43132 YLR281CYLR281C 468 nt13.82□□□□□ -0.2
BRE2P43132 SPT5YML010W 3192 nt13.81□□□□□ -0.2
BRE2P43132 YDR095CYDR095C 411 nt13.81□□□□□ -0.2
BRE2P43132 WHI5YOR083W 888 nt13.78□□□□□ -0.2
BRE2P43132 ALF1YNL148C 765 nt13.77□□□□□ -0.21
BRE2P43132 PUS2YGL063W 1113 nt13.75□□□□□ -0.21
BRE2P43132 YHR165W-AYHR165W-A 312 nt13.7□□□□□ -0.22
BRE2P43132 YGR139WYGR139W 339 nt13.68□□□□□ -0.22
BRE2P43132 SUF2tP(AGG)C 72 nt13.67□□□□□ -0.22
BRE2P43132 SUF10tP(AGG)N 72 nt13.67□□□□□ -0.22
Retrieved 100 of 7,029 protein–RNA pairs in 7.9 ms