Protein–RNA interactions for Protein: P48566

MSB3, GTPase-activating protein GYP3, yeastyeast

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSB3P48566 YML009W-BYML009W-B 477 nt27.18■■□□□ 1.94
MSB3P48566 NOP1YDL014W 984 nt26.56■■□□□ 1.84
MSB3P48566 NSR1YGR159C 1245 nt26.39■■□□□ 1.82
MSB3P48566 YKL036CYKL036C 393 nt25.13■■□□□ 1.61
MSB3P48566 YJL027CYJL027C 417 nt23.59■■□□□ 1.37
MSB3P48566 Q0297Q0297 156 nt23.49■■□□□ 1.35
MSB3P48566 SRX1YKL086W 384 nt23.26■■□□□ 1.31
MSB3P48566 SCS3YGL126W 1143 nt23.25■■□□□ 1.31
MSB3P48566 MDJ1YFL016C 1536 nt22.99■■□□□ 1.27
MSB3P48566 YCR051WYCR051W 669 nt22.15■■□□□ 1.14
MSB3P48566 YOL085CYOL085C 342 nt21.78■■□□□ 1.08
MSB3P48566 PKP1YIL042C 1185 nt21.45■■□□□ 1.02
MSB3P48566 SCJ1YMR214W 1134 nt21.23■□□□□ 0.99
MSB3P48566 RPP1BYDL130W 321 nt21.09■□□□□ 0.97
MSB3P48566 ATS1YAL020C 1002 nt20.94■□□□□ 0.94
MSB3P48566 TRN1tP(UGG)A 72 nt20.7■□□□□ 0.9
MSB3P48566 SUF9tP(UGG)F 72 nt20.7■□□□□ 0.9
MSB3P48566 SUF8tP(UGG)H 72 nt20.7■□□□□ 0.9
MSB3P48566 tP(UGG)LtP(UGG)L 72 nt20.7■□□□□ 0.9
MSB3P48566 SUF7tP(UGG)M 72 nt20.7■□□□□ 0.9
MSB3P48566 tP(UGG)N1tP(UGG)N1 72 nt20.7■□□□□ 0.9
MSB3P48566 tP(UGG)N2tP(UGG)N2 72 nt20.7■□□□□ 0.9
MSB3P48566 tP(UGG)O1tP(UGG)O1 72 nt20.7■□□□□ 0.9
MSB3P48566 SUF11tP(UGG)O2 72 nt20.7■□□□□ 0.9
MSB3P48566 DBP2YNL112W 1641 nt20.59■□□□□ 0.89
MSB3P48566 CCC1YLR220W 969 nt20.54■□□□□ 0.88
MSB3P48566 PET122YER153C 765 nt20.14■□□□□ 0.81
MSB3P48566 SCR1SCR1 522 nt19.99■□□□□ 0.79
MSB3P48566 tP(UGG)O3tP(UGG)O3 72 nt19.78■□□□□ 0.76
MSB3P48566 RRN5YLR141W 1092 nt19.6■□□□□ 0.73
MSB3P48566 RTC3YHR087W 336 nt19.41■□□□□ 0.7
MSB3P48566 RVS167YDR388W 1449 nt19.37■□□□□ 0.69
MSB3P48566 RSB1YOR049C 1065 nt19.37■□□□□ 0.69
MSB3P48566 YBR190WYBR190W 312 nt19.33■□□□□ 0.68
MSB3P48566 PST2YDR032C 597 nt19.29■□□□□ 0.68
MSB3P48566 YER088W-BYER088W-B 147 nt19.23■□□□□ 0.67
MSB3P48566 YDJ1YNL064C 1230 nt19.08■□□□□ 0.64
MSB3P48566 SHR5YOL110W 714 nt18.88■□□□□ 0.61
MSB3P48566 YKL097CYKL097C 411 nt18.83■□□□□ 0.6
MSB3P48566 GAR1YHR089C 618 nt18.63■□□□□ 0.57
MSB3P48566 SHU1YHL006C 453 nt18.4■□□□□ 0.54
MSB3P48566 DEP1YAL013W 1218 nt18.24■□□□□ 0.51
MSB3P48566 YOR139CYOR139C 393 nt18.03■□□□□ 0.48
MSB3P48566 URN1YPR152C 1398 nt18.01■□□□□ 0.47
MSB3P48566 YAL037C-BYAL037C-B 975 nt17.98■□□□□ 0.47
MSB3P48566 TIR1YER011W 765 nt17.96■□□□□ 0.47
MSB3P48566 YNL208WYNL208W 600 nt17.92■□□□□ 0.46
MSB3P48566 RPN10YHR200W 807 nt17.79■□□□□ 0.44
MSB3P48566 SSA1YAL005C 1929 nt17.67■□□□□ 0.42
MSB3P48566 NPL3YDR432W 1245 nt17.67■□□□□ 0.42
MSB3P48566 OPI9YLR338W 858 nt17.59■□□□□ 0.41
MSB3P48566 SRB2YHR041C 633 nt17.58■□□□□ 0.4
MSB3P48566 MNP1YGL068W 585 nt17.42■□□□□ 0.38
MSB3P48566 SAH1YER043C 1350 nt17.39■□□□□ 0.37
MSB3P48566 HOM6YJR139C 1080 nt17.34■□□□□ 0.37
MSB3P48566 WWM1YFL010C 636 nt17.32■□□□□ 0.36
MSB3P48566 YGR021WYGR021W 873 nt17.3■□□□□ 0.36
MSB3P48566 tM(CAU)CtM(CAU)C 72 nt17.26■□□□□ 0.35
MSB3P48566 IMT4tM(CAU)E 72 nt17.26■□□□□ 0.35
MSB3P48566 IMT3tM(CAU)J3 72 nt17.26■□□□□ 0.35
MSB3P48566 IMT1tM(CAU)O1 72 nt17.26■□□□□ 0.35
MSB3P48566 IMT2tM(CAU)P 72 nt17.26■□□□□ 0.35
MSB3P48566 YOL037CYOL037C 354 nt17.24■□□□□ 0.35
MSB3P48566 YJR018WYJR018W 363 nt17.19■□□□□ 0.34
MSB3P48566 YJR120WYJR120W 351 nt17.16■□□□□ 0.34
MSB3P48566 PUT4YOR348C 1884 nt17.16■□□□□ 0.34
MSB3P48566 RKM5YLR137W 1104 nt17.08■□□□□ 0.32
MSB3P48566 ARE1YCR048W 1833 nt17.06■□□□□ 0.32
MSB3P48566 PUN1YLR414C 792 nt17.05■□□□□ 0.32
MSB3P48566 RPP2BYDR382W 333 nt16.96■□□□□ 0.31
MSB3P48566 YFL021C-AYFL021C-A 855 nt16.94■□□□□ 0.3
MSB3P48566 SSA3YBL075C 1950 nt16.93■□□□□ 0.3
MSB3P48566 PUS2YGL063W 1113 nt16.9■□□□□ 0.3
MSB3P48566 YLR281CYLR281C 468 nt16.85■□□□□ 0.29
MSB3P48566 MOT3YMR070W 1473 nt16.83■□□□□ 0.28
MSB3P48566 YHR049C-AYHR049C-A 297 nt16.82■□□□□ 0.28
MSB3P48566 PTC2YER089C 1395 nt16.8■□□□□ 0.28
MSB3P48566 BDH2YAL061W 1254 nt16.77■□□□□ 0.28
MSB3P48566 WHI5YOR083W 888 nt16.71■□□□□ 0.27
MSB3P48566 POA1YBR022W 534 nt16.68■□□□□ 0.26
MSB3P48566 LSM3YLR438C-A 270 nt16.63■□□□□ 0.25
MSB3P48566 BSC6YOL137W 1494 nt16.55■□□□□ 0.24
MSB3P48566 YPR011CYPR011C 981 nt16.53■□□□□ 0.24
MSB3P48566 FMP45YDL222C 930 nt16.5■□□□□ 0.23
MSB3P48566 BUD23YCR047C 828 nt16.48■□□□□ 0.23
MSB3P48566 YBL100CYBL100C 315 nt16.46■□□□□ 0.23
MSB3P48566 NAB2YGL122C 1578 nt16.45■□□□□ 0.22
MSB3P48566 INM2YDR287W 879 nt16.44■□□□□ 0.22
MSB3P48566 YLR236CYLR236C 324 nt16.44■□□□□ 0.22
MSB3P48566 DSK2YMR276W 1122 nt16.41■□□□□ 0.22
MSB3P48566 FPR4YLR449W 1179 nt16.38■□□□□ 0.21
MSB3P48566 DAL1YIR027C 1383 nt16.38■□□□□ 0.21
MSB3P48566 FIS1YIL065C 468 nt16.36■□□□□ 0.21
MSB3P48566 YCH1YGR203W 447 nt16.32■□□□□ 0.2
MSB3P48566 TRM9YML014W 840 nt16.32■□□□□ 0.2
MSB3P48566 MRPL8YJL063C 717 nt16.29■□□□□ 0.2
MSB3P48566 FUN26YAL022C 1554 nt16.29■□□□□ 0.2
MSB3P48566 PHO4YFR034C 939 nt16.25■□□□□ 0.19
MSB3P48566 YLR154C-GYLR154C-G 150 nt16.25■□□□□ 0.19
MSB3P48566 IMP2'YIL154C 1041 nt16.23■□□□□ 0.19
Retrieved 100 of 7,029 protein–RNA pairs in 15.9 ms