Protein–RNA interactions for Protein: P22149

AFT1, Iron-regulated transcriptional activator AFT1, yeastyeast

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AFT1P22149 YML009W-BYML009W-B 477 nt22.61■■□□□ 1.21
AFT1P22149 NOP1YDL014W 984 nt22.19■■□□□ 1.14
AFT1P22149 NSR1YGR159C 1245 nt22.12■■□□□ 1.13
AFT1P22149 YKL036CYKL036C 393 nt20.79■□□□□ 0.92
AFT1P22149 YJL027CYJL027C 417 nt19.49■□□□□ 0.71
AFT1P22149 Q0297Q0297 156 nt19.47■□□□□ 0.71
AFT1P22149 SRX1YKL086W 384 nt19.33■□□□□ 0.68
AFT1P22149 MDJ1YFL016C 1536 nt19.24■□□□□ 0.67
AFT1P22149 SCS3YGL126W 1143 nt19.06■□□□□ 0.64
AFT1P22149 YCR051WYCR051W 669 nt18.41■□□□□ 0.54
AFT1P22149 YOL085CYOL085C 342 nt17.95■□□□□ 0.46
AFT1P22149 PKP1YIL042C 1185 nt17.63■□□□□ 0.41
AFT1P22149 RPP1BYDL130W 321 nt17.49■□□□□ 0.39
AFT1P22149 SCJ1YMR214W 1134 nt17.41■□□□□ 0.38
AFT1P22149 TRN1tP(UGG)A 72 nt17.21■□□□□ 0.35
AFT1P22149 SUF9tP(UGG)F 72 nt17.21■□□□□ 0.35
AFT1P22149 SUF8tP(UGG)H 72 nt17.21■□□□□ 0.35
AFT1P22149 tP(UGG)LtP(UGG)L 72 nt17.21■□□□□ 0.35
AFT1P22149 SUF7tP(UGG)M 72 nt17.21■□□□□ 0.35
AFT1P22149 tP(UGG)N1tP(UGG)N1 72 nt17.21■□□□□ 0.35
AFT1P22149 tP(UGG)N2tP(UGG)N2 72 nt17.21■□□□□ 0.35
AFT1P22149 tP(UGG)O1tP(UGG)O1 72 nt17.21■□□□□ 0.35
AFT1P22149 SUF11tP(UGG)O2 72 nt17.21■□□□□ 0.35
AFT1P22149 ATS1YAL020C 1002 nt17.16■□□□□ 0.34
AFT1P22149 CCC1YLR220W 969 nt17.1■□□□□ 0.33
AFT1P22149 DBP2YNL112W 1641 nt17.1■□□□□ 0.33
AFT1P22149 SCR1SCR1 522 nt16.66■□□□□ 0.26
AFT1P22149 PET122YER153C 765 nt16.63■□□□□ 0.25
AFT1P22149 tP(UGG)O3tP(UGG)O3 72 nt16.43■□□□□ 0.22
AFT1P22149 RVS167YDR388W 1449 nt16.36■□□□□ 0.21
AFT1P22149 YBR190WYBR190W 312 nt16.34■□□□□ 0.21
AFT1P22149 RRN5YLR141W 1092 nt16.21■□□□□ 0.19
AFT1P22149 RTC3YHR087W 336 nt16.07■□□□□ 0.16
AFT1P22149 RSB1YOR049C 1065 nt16.04■□□□□ 0.16
AFT1P22149 YDJ1YNL064C 1230 nt15.91■□□□□ 0.14
AFT1P22149 YER088W-BYER088W-B 147 nt15.88■□□□□ 0.13
AFT1P22149 SHR5YOL110W 714 nt15.81■□□□□ 0.12
AFT1P22149 PST2YDR032C 597 nt15.8■□□□□ 0.12
AFT1P22149 GAR1YHR089C 618 nt15.5■□□□□ 0.07
AFT1P22149 YKL097CYKL097C 411 nt15.45■□□□□ 0.06
AFT1P22149 DEP1YAL013W 1218 nt15.22■□□□□ 0.03
AFT1P22149 URN1YPR152C 1398 nt15.12■□□□□ 0.01
AFT1P22149 RPN10YHR200W 807 nt15.09■□□□□ 0.01
AFT1P22149 SHU1YHL006C 453 nt15.06■□□□□ 0
AFT1P22149 YNL208WYNL208W 600 nt15.06■□□□□ 0
AFT1P22149 TIR1YER011W 765 nt14.96□□□□□ -0.01
AFT1P22149 OPI9YLR338W 858 nt14.82□□□□□ -0.04
AFT1P22149 YAL037C-BYAL037C-B 975 nt14.73□□□□□ -0.05
AFT1P22149 YOR139CYOR139C 393 nt14.66□□□□□ -0.06
AFT1P22149 SSA1YAL005C 1929 nt14.63□□□□□ -0.07
AFT1P22149 SAH1YER043C 1350 nt14.6□□□□□ -0.07
AFT1P22149 NPL3YDR432W 1245 nt14.58□□□□□ -0.08
AFT1P22149 YJR018WYJR018W 363 nt14.47□□□□□ -0.09
AFT1P22149 PUT4YOR348C 1884 nt14.45□□□□□ -0.1
AFT1P22149 YGR021WYGR021W 873 nt14.44□□□□□ -0.1
AFT1P22149 PUN1YLR414C 792 nt14.44□□□□□ -0.1
AFT1P22149 SRB2YHR041C 633 nt14.37□□□□□ -0.11
AFT1P22149 RPP2BYDR382W 333 nt14.35□□□□□ -0.11
AFT1P22149 WWM1YFL010C 636 nt14.33□□□□□ -0.12
AFT1P22149 HOM6YJR139C 1080 nt14.33□□□□□ -0.12
AFT1P22149 ARE1YCR048W 1833 nt14.31□□□□□ -0.12
AFT1P22149 MNP1YGL068W 585 nt14.31□□□□□ -0.12
AFT1P22149 YOL037CYOL037C 354 nt14.3□□□□□ -0.12
AFT1P22149 YHR049C-AYHR049C-A 297 nt14.2□□□□□ -0.14
AFT1P22149 YJR120WYJR120W 351 nt14.19□□□□□ -0.14
AFT1P22149 PTC2YER089C 1395 nt14.15□□□□□ -0.14
AFT1P22149 YFL021C-AYFL021C-A 855 nt14.14□□□□□ -0.15
AFT1P22149 RKM5YLR137W 1104 nt14.14□□□□□ -0.15
AFT1P22149 POA1YBR022W 534 nt14.09□□□□□ -0.15
AFT1P22149 tM(CAU)CtM(CAU)C 72 nt14.08□□□□□ -0.16
AFT1P22149 IMT4tM(CAU)E 72 nt14.08□□□□□ -0.16
AFT1P22149 IMT3tM(CAU)J3 72 nt14.08□□□□□ -0.16
AFT1P22149 IMT1tM(CAU)O1 72 nt14.08□□□□□ -0.16
AFT1P22149 IMT2tM(CAU)P 72 nt14.08□□□□□ -0.16
AFT1P22149 BDH2YAL061W 1254 nt14.05□□□□□ -0.16
AFT1P22149 LSM3YLR438C-A 270 nt13.97□□□□□ -0.17
AFT1P22149 BUD23YCR047C 828 nt13.96□□□□□ -0.17
AFT1P22149 INM2YDR287W 879 nt13.93□□□□□ -0.18
AFT1P22149 NAB2YGL122C 1578 nt13.92□□□□□ -0.18
AFT1P22149 PUS2YGL063W 1113 nt13.91□□□□□ -0.18
AFT1P22149 YLR281CYLR281C 468 nt13.88□□□□□ -0.19
AFT1P22149 FPR4YLR449W 1179 nt13.85□□□□□ -0.19
AFT1P22149 SSA3YBL075C 1950 nt13.85□□□□□ -0.19
AFT1P22149 YBL100CYBL100C 315 nt13.84□□□□□ -0.19
AFT1P22149 DAL1YIR027C 1383 nt13.83□□□□□ -0.2
AFT1P22149 WHI5YOR083W 888 nt13.8□□□□□ -0.2
AFT1P22149 TRM9YML014W 840 nt13.77□□□□□ -0.21
AFT1P22149 YGR139WYGR139W 339 nt13.76□□□□□ -0.21
AFT1P22149 MOT3YMR070W 1473 nt13.71□□□□□ -0.21
AFT1P22149 BSC6YOL137W 1494 nt13.7□□□□□ -0.22
AFT1P22149 FIS1YIL065C 468 nt13.7□□□□□ -0.22
AFT1P22149 FUN26YAL022C 1554 nt13.66□□□□□ -0.22
AFT1P22149 PHO4YFR034C 939 nt13.66□□□□□ -0.22
AFT1P22149 IMP2'YIL154C 1041 nt13.57□□□□□ -0.24
AFT1P22149 FMP45YDL222C 930 nt13.56□□□□□ -0.24
AFT1P22149 DSK2YMR276W 1122 nt13.56□□□□□ -0.24
AFT1P22149 CCT6YDR188W 1641 nt13.54□□□□□ -0.24
AFT1P22149 YLR154C-GYLR154C-G 150 nt13.52□□□□□ -0.25
AFT1P22149 SUF2tP(AGG)C 72 nt13.49□□□□□ -0.25
AFT1P22149 SUF10tP(AGG)N 72 nt13.49□□□□□ -0.25
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms