Protein–RNA interactions for Protein: P25591

VAC17, vacuole-related protein 17, yeastyeast

Predictions only

Length 423 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAC17P25591 NSR1YGR159C 1245 nt20.2■□□□□ 0.82
VAC17P25591 YML009W-BYML009W-B 477 nt20.02■□□□□ 0.8
VAC17P25591 NOP1YDL014W 984 nt19.35■□□□□ 0.69
VAC17P25591 MDJ1YFL016C 1536 nt18.2■□□□□ 0.5
VAC17P25591 YKL036CYKL036C 393 nt17.6■□□□□ 0.41
VAC17P25591 SRX1YKL086W 384 nt16.94■□□□□ 0.3
VAC17P25591 Q0297Q0297 156 nt16.89■□□□□ 0.29
VAC17P25591 YJL027CYJL027C 417 nt16.76■□□□□ 0.27
VAC17P25591 SCS3YGL126W 1143 nt16.12■□□□□ 0.17
VAC17P25591 DBP2YNL112W 1641 nt16.04■□□□□ 0.16
VAC17P25591 YCR051WYCR051W 669 nt16■□□□□ 0.15
VAC17P25591 YBR190WYBR190W 312 nt15.61■□□□□ 0.09
VAC17P25591 TRN1tP(UGG)A 72 nt15.5■□□□□ 0.07
VAC17P25591 SUF9tP(UGG)F 72 nt15.5■□□□□ 0.07
VAC17P25591 SUF8tP(UGG)H 72 nt15.5■□□□□ 0.07
VAC17P25591 tP(UGG)LtP(UGG)L 72 nt15.5■□□□□ 0.07
VAC17P25591 SUF7tP(UGG)M 72 nt15.5■□□□□ 0.07
VAC17P25591 tP(UGG)N1tP(UGG)N1 72 nt15.5■□□□□ 0.07
VAC17P25591 tP(UGG)N2tP(UGG)N2 72 nt15.5■□□□□ 0.07
VAC17P25591 tP(UGG)O1tP(UGG)O1 72 nt15.5■□□□□ 0.07
VAC17P25591 SUF11tP(UGG)O2 72 nt15.5■□□□□ 0.07
VAC17P25591 CCC1YLR220W 969 nt15.29■□□□□ 0.04
VAC17P25591 YOL085CYOL085C 342 nt15.27■□□□□ 0.04
VAC17P25591 RTC3YHR087W 336 nt15.19■□□□□ 0.02
VAC17P25591 RPP1BYDL130W 321 nt15.14■□□□□ 0.01
VAC17P25591 PKP1YIL042C 1185 nt15.05■□□□□ -0
VAC17P25591 RVS167YDR388W 1449 nt14.92□□□□□ -0.02
VAC17P25591 SCJ1YMR214W 1134 nt14.86□□□□□ -0.03
VAC17P25591 Q0182Q0182 405 nt14.57□□□□□ -0.08
VAC17P25591 tP(UGG)O3tP(UGG)O3 72 nt14.55□□□□□ -0.08
VAC17P25591 ATS1YAL020C 1002 nt14.52□□□□□ -0.09
VAC17P25591 PET122YER153C 765 nt14.5□□□□□ -0.09
VAC17P25591 MOT3YMR070W 1473 nt14.5□□□□□ -0.09
VAC17P25591 PUT4YOR348C 1884 nt14.43□□□□□ -0.1
VAC17P25591 SHR5YOL110W 714 nt14.37□□□□□ -0.11
VAC17P25591 SCR1SCR1 522 nt14.22□□□□□ -0.13
VAC17P25591 SSA3YBL075C 1950 nt14.17□□□□□ -0.14
VAC17P25591 URN1YPR152C 1398 nt14.14□□□□□ -0.15
VAC17P25591 YDJ1YNL064C 1230 nt14.1□□□□□ -0.15
VAC17P25591 ARE1YCR048W 1833 nt14.08□□□□□ -0.16
VAC17P25591 DEP1YAL013W 1218 nt14.04□□□□□ -0.16
VAC17P25591 RRN5YLR141W 1092 nt14.04□□□□□ -0.16
VAC17P25591 OPI9YLR338W 858 nt14.03□□□□□ -0.16
VAC17P25591 SAH1YER043C 1350 nt14□□□□□ -0.17
VAC17P25591 YGR139WYGR139W 339 nt13.95□□□□□ -0.18
VAC17P25591 POA1YBR022W 534 nt13.91□□□□□ -0.18
VAC17P25591 YHR049C-AYHR049C-A 297 nt13.86□□□□□ -0.19
VAC17P25591 RPN10YHR200W 807 nt13.83□□□□□ -0.2
VAC17P25591 GAR1YHR089C 618 nt13.79□□□□□ -0.2
VAC17P25591 YNL208WYNL208W 600 nt13.79□□□□□ -0.2
VAC17P25591 YER088W-BYER088W-B 147 nt13.78□□□□□ -0.2
VAC17P25591 BSC6YOL137W 1494 nt13.68□□□□□ -0.22
VAC17P25591 RSB1YOR049C 1065 nt13.63□□□□□ -0.23
VAC17P25591 PUN1YLR414C 792 nt13.59□□□□□ -0.23
VAC17P25591 PTC2YER089C 1395 nt13.48□□□□□ -0.25
VAC17P25591 BUD23YCR047C 828 nt13.48□□□□□ -0.25
VAC17P25591 YJR018WYJR018W 363 nt13.47□□□□□ -0.25
VAC17P25591 PST2YDR032C 597 nt13.42□□□□□ -0.26
VAC17P25591 NME1NME1 340 nt13.41□□□□□ -0.26
VAC17P25591 TIR1YER011W 765 nt13.36□□□□□ -0.27
VAC17P25591 SPT5YML010W 3192 nt13.35□□□□□ -0.27
VAC17P25591 NAB2YGL122C 1578 nt13.34□□□□□ -0.27
VAC17P25591 SSA1YAL005C 1929 nt13.29□□□□□ -0.28
VAC17P25591 YJR120WYJR120W 351 nt13.28□□□□□ -0.28
VAC17P25591 FIS1YIL065C 468 nt13.17□□□□□ -0.3
VAC17P25591 DAL1YIR027C 1383 nt13.12□□□□□ -0.31
VAC17P25591 RPP2BYDR382W 333 nt13.09□□□□□ -0.31
VAC17P25591 SRB2YHR041C 633 nt13.05□□□□□ -0.32
VAC17P25591 INM2YDR287W 879 nt13.03□□□□□ -0.32
VAC17P25591 YKL097CYKL097C 411 nt13.02□□□□□ -0.33
VAC17P25591 FPR4YLR449W 1179 nt13.02□□□□□ -0.33
VAC17P25591 PHO4YFR034C 939 nt13□□□□□ -0.33
VAC17P25591 SSA4YER103W 1929 nt12.94□□□□□ -0.34
VAC17P25591 MEP2YNL142W 1500 nt12.88□□□□□ -0.35
VAC17P25591 YPS1YLR120C 1710 nt12.87□□□□□ -0.35
VAC17P25591 YBL100CYBL100C 315 nt12.86□□□□□ -0.35
VAC17P25591 BDH2YAL061W 1254 nt12.82□□□□□ -0.36
VAC17P25591 SHU1YHL006C 453 nt12.75□□□□□ -0.37
VAC17P25591 YDR095CYDR095C 411 nt12.74□□□□□ -0.37
VAC17P25591 WWM1YFL010C 636 nt12.73□□□□□ -0.37
VAC17P25591 CSM2YIL132C 642 nt12.71□□□□□ -0.37
VAC17P25591 FUN26YAL022C 1554 nt12.71□□□□□ -0.37
VAC17P25591 YHR165W-AYHR165W-A 312 nt12.69□□□□□ -0.38
VAC17P25591 DCW1YKL046C 1350 nt12.69□□□□□ -0.38
VAC17P25591 LSM3YLR438C-A 270 nt12.6□□□□□ -0.39
VAC17P25591 TRM9YML014W 840 nt12.6□□□□□ -0.39
VAC17P25591 YGR021WYGR021W 873 nt12.55□□□□□ -0.4
VAC17P25591 YAL037C-BYAL037C-B 975 nt12.55□□□□□ -0.4
VAC17P25591 ALF1YNL148C 765 nt12.54□□□□□ -0.4
VAC17P25591 CCT6YDR188W 1641 nt12.53□□□□□ -0.4
VAC17P25591 PTP1YDL230W 1008 nt12.52□□□□□ -0.41
VAC17P25591 YFL021C-AYFL021C-A 855 nt12.52□□□□□ -0.41
VAC17P25591 HOM6YJR139C 1080 nt12.52□□□□□ -0.41
VAC17P25591 BDF1YLR399C 2061 nt12.5□□□□□ -0.41
VAC17P25591 EMI2YDR516C 1503 nt12.5□□□□□ -0.41
VAC17P25591 RPP2AYOL039W 321 nt12.49□□□□□ -0.41
VAC17P25591 CAC2YML102W 1407 nt12.45□□□□□ -0.42
VAC17P25591 SIS1YNL007C 1059 nt12.43□□□□□ -0.42
VAC17P25591 PAU21YOR394W 495 nt12.42□□□□□ -0.42
VAC17P25591 PAU22YPL282C 495 nt12.42□□□□□ -0.42
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms