Protein–RNA interactions for Protein: P38781

RSC30, Chromatin structure-remodeling complex protein RSC30, yeastyeast

Predictions only

Length 883 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC30P38781 YML009W-BYML009W-B 477 nt23.56■■□□□ 1.36
RSC30P38781 NOP1YDL014W 984 nt23.3■■□□□ 1.32
RSC30P38781 NSR1YGR159C 1245 nt22.82■■□□□ 1.24
RSC30P38781 YKL036CYKL036C 393 nt22.11■■□□□ 1.13
RSC30P38781 YJL027CYJL027C 417 nt20.78■□□□□ 0.92
RSC30P38781 Q0297Q0297 156 nt20.54■□□□□ 0.88
RSC30P38781 SCS3YGL126W 1143 nt20.42■□□□□ 0.86
RSC30P38781 SRX1YKL086W 384 nt20.28■□□□□ 0.84
RSC30P38781 MDJ1YFL016C 1536 nt19.46■□□□□ 0.71
RSC30P38781 YCR051WYCR051W 669 nt19.32■□□□□ 0.68
RSC30P38781 SCJ1YMR214W 1134 nt19.11■□□□□ 0.65
RSC30P38781 YOL085CYOL085C 342 nt19.08■□□□□ 0.64
RSC30P38781 PKP1YIL042C 1185 nt18.68■□□□□ 0.58
RSC30P38781 ATS1YAL020C 1002 nt18.49■□□□□ 0.55
RSC30P38781 RPP1BYDL130W 321 nt18.44■□□□□ 0.54
RSC30P38781 TRN1tP(UGG)A 72 nt17.86■□□□□ 0.45
RSC30P38781 SUF9tP(UGG)F 72 nt17.86■□□□□ 0.45
RSC30P38781 SUF8tP(UGG)H 72 nt17.86■□□□□ 0.45
RSC30P38781 tP(UGG)LtP(UGG)L 72 nt17.86■□□□□ 0.45
RSC30P38781 SUF7tP(UGG)M 72 nt17.86■□□□□ 0.45
RSC30P38781 tP(UGG)N1tP(UGG)N1 72 nt17.86■□□□□ 0.45
RSC30P38781 tP(UGG)N2tP(UGG)N2 72 nt17.86■□□□□ 0.45
RSC30P38781 tP(UGG)O1tP(UGG)O1 72 nt17.86■□□□□ 0.45
RSC30P38781 SUF11tP(UGG)O2 72 nt17.86■□□□□ 0.45
RSC30P38781 CCC1YLR220W 969 nt17.73■□□□□ 0.43
RSC30P38781 SCR1SCR1 522 nt17.63■□□□□ 0.41
RSC30P38781 PET122YER153C 765 nt17.48■□□□□ 0.39
RSC30P38781 DBP2YNL112W 1641 nt17.46■□□□□ 0.39
RSC30P38781 RTC3YHR087W 336 nt17.31■□□□□ 0.36
RSC30P38781 tP(UGG)O3tP(UGG)O3 72 nt17.16■□□□□ 0.34
RSC30P38781 RRN5YLR141W 1092 nt17.08■□□□□ 0.32
RSC30P38781 RSB1YOR049C 1065 nt16.99■□□□□ 0.31
RSC30P38781 PST2YDR032C 597 nt16.98■□□□□ 0.31
RSC30P38781 RVS167YDR388W 1449 nt16.8■□□□□ 0.28
RSC30P38781 YKL097CYKL097C 411 nt16.77■□□□□ 0.28
RSC30P38781 YER088W-BYER088W-B 147 nt16.73■□□□□ 0.27
RSC30P38781 YDJ1YNL064C 1230 nt16.62■□□□□ 0.25
RSC30P38781 YBR190WYBR190W 312 nt16.48■□□□□ 0.23
RSC30P38781 SHR5YOL110W 714 nt16.32■□□□□ 0.2
RSC30P38781 GAR1YHR089C 618 nt16.12■□□□□ 0.17
RSC30P38781 SHU1YHL006C 453 nt16.1■□□□□ 0.17
RSC30P38781 YOR139CYOR139C 393 nt15.83■□□□□ 0.12
RSC30P38781 NPL3YDR432W 1245 nt15.69■□□□□ 0.1
RSC30P38781 YAL037C-BYAL037C-B 975 nt15.61■□□□□ 0.09
RSC30P38781 Q0182Q0182 405 nt15.56■□□□□ 0.08
RSC30P38781 TIR1YER011W 765 nt15.55■□□□□ 0.08
RSC30P38781 DEP1YAL013W 1218 nt15.55■□□□□ 0.08
RSC30P38781 MOT3YMR070W 1473 nt15.5■□□□□ 0.07
RSC30P38781 YNL208WYNL208W 600 nt15.47■□□□□ 0.07
RSC30P38781 RPN10YHR200W 807 nt15.44■□□□□ 0.06
RSC30P38781 URN1YPR152C 1398 nt15.38■□□□□ 0.05
RSC30P38781 YOL037CYOL037C 354 nt15.23■□□□□ 0.03
RSC30P38781 tM(CAU)CtM(CAU)C 72 nt15.2■□□□□ 0.02
RSC30P38781 IMT4tM(CAU)E 72 nt15.2■□□□□ 0.02
RSC30P38781 IMT3tM(CAU)J3 72 nt15.2■□□□□ 0.02
RSC30P38781 IMT1tM(CAU)O1 72 nt15.2■□□□□ 0.02
RSC30P38781 IMT2tM(CAU)P 72 nt15.2■□□□□ 0.02
RSC30P38781 YGR021WYGR021W 873 nt15.19■□□□□ 0.02
RSC30P38781 SSA1YAL005C 1929 nt15.13■□□□□ 0.01
RSC30P38781 HOM6YJR139C 1080 nt15.08■□□□□ 0
RSC30P38781 MNP1YGL068W 585 nt15.07■□□□□ 0
RSC30P38781 BSC6YOL137W 1494 nt15.06■□□□□ 0
RSC30P38781 OPI9YLR338W 858 nt15□□□□□ -0.01
RSC30P38781 WWM1YFL010C 636 nt14.94□□□□□ -0.02
RSC30P38781 SRB2YHR041C 633 nt14.9□□□□□ -0.02
RSC30P38781 PUS2YGL063W 1113 nt14.87□□□□□ -0.03
RSC30P38781 RKM5YLR137W 1104 nt14.87□□□□□ -0.03
RSC30P38781 YFL021C-AYFL021C-A 855 nt14.76□□□□□ -0.05
RSC30P38781 YJR018WYJR018W 363 nt14.75□□□□□ -0.05
RSC30P38781 YLR281CYLR281C 468 nt14.75□□□□□ -0.05
RSC30P38781 RPP2BYDR382W 333 nt14.73□□□□□ -0.05
RSC30P38781 SAH1YER043C 1350 nt14.7□□□□□ -0.06
RSC30P38781 MRPL8YJL063C 717 nt14.66□□□□□ -0.06
RSC30P38781 PUN1YLR414C 792 nt14.64□□□□□ -0.07
RSC30P38781 PUT4YOR348C 1884 nt14.62□□□□□ -0.07
RSC30P38781 WHI5YOR083W 888 nt14.61□□□□□ -0.07
RSC30P38781 YJR120WYJR120W 351 nt14.51□□□□□ -0.09
RSC30P38781 FMP45YDL222C 930 nt14.49□□□□□ -0.09
RSC30P38781 BDH2YAL061W 1254 nt14.48□□□□□ -0.09
RSC30P38781 LSM3YLR438C-A 270 nt14.46□□□□□ -0.09
RSC30P38781 ADO1YJR105W 1023 nt14.44□□□□□ -0.1
RSC30P38781 YCH1YGR203W 447 nt14.42□□□□□ -0.1
RSC30P38781 ARE1YCR048W 1833 nt14.41□□□□□ -0.1
RSC30P38781 IMP2'YIL154C 1041 nt14.4□□□□□ -0.1
RSC30P38781 DSK2YMR276W 1122 nt14.4□□□□□ -0.1
RSC30P38781 SSA3YBL075C 1950 nt14.34□□□□□ -0.11
RSC30P38781 UBX6YJL048C 1191 nt14.31□□□□□ -0.12
RSC30P38781 YHR049C-AYHR049C-A 297 nt14.28□□□□□ -0.12
RSC30P38781 PTC2YER089C 1395 nt14.27□□□□□ -0.12
RSC30P38781 YGR139WYGR139W 339 nt14.27□□□□□ -0.13
RSC30P38781 YPR011CYPR011C 981 nt14.26□□□□□ -0.13
RSC30P38781 YEL076C-AYEL076C-A 651 nt14.22□□□□□ -0.13
RSC30P38781 YEL076CYEL076C 651 nt14.22□□□□□ -0.13
RSC30P38781 YLR464WYLR464W 651 nt14.22□□□□□ -0.13
RSC30P38781 POA1YBR022W 534 nt14.22□□□□□ -0.13
RSC30P38781 YLR236CYLR236C 324 nt14.21□□□□□ -0.13
RSC30P38781 INM2YDR287W 879 nt14.18□□□□□ -0.14
RSC30P38781 TRM9YML014W 840 nt14.13□□□□□ -0.15
RSC30P38781 YLR154C-GYLR154C-G 150 nt14.11□□□□□ -0.15
RSC30P38781 YBL100CYBL100C 315 nt14.11□□□□□ -0.15
Retrieved 100 of 7,029 protein–RNA pairs in 10.7 ms