Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 Q0182Q0182 405 nt17.11■□□□□ 0.33
NUP42P49686 MOT3YMR070W 1473 nt17■□□□□ 0.31
NUP42P49686 YGR139WYGR139W 339 nt15.29■□□□□ 0.04
NUP42P49686 NME1NME1 340 nt15.16■□□□□ 0.02
NUP42P49686 NSR1YGR159C 1245 nt14.56□□□□□ -0.08
NUP42P49686 YML009W-BYML009W-B 477 nt14.19□□□□□ -0.14
NUP42P49686 CSM2YIL132C 642 nt14.12□□□□□ -0.15
NUP42P49686 PAU21YOR394W 495 nt13.75□□□□□ -0.21
NUP42P49686 PAU22YPL282C 495 nt13.75□□□□□ -0.21
NUP42P49686 NOP1YDL014W 984 nt13.6□□□□□ -0.23
NUP42P49686 ARO7YPR060C 771 nt13.59□□□□□ -0.23
NUP42P49686 MDJ1YFL016C 1536 nt13.44□□□□□ -0.26
NUP42P49686 MET8YBR213W 825 nt13.23□□□□□ -0.29
NUP42P49686 CLB6YGR109C 1143 nt13.17□□□□□ -0.3
NUP42P49686 REG2YBR050C 1017 nt13.11□□□□□ -0.31
NUP42P49686 SSA3YBL075C 1950 nt13.08□□□□□ -0.32
NUP42P49686 PAM17YKR065C 594 nt12.96□□□□□ -0.33
NUP42P49686 YEL009C-AYEL009C-A 408 nt12.88□□□□□ -0.35
NUP42P49686 ARA2YMR041C 1008 nt12.76□□□□□ -0.37
NUP42P49686 YLR122CYLR122C 378 nt12.64□□□□□ -0.39
NUP42P49686 Q0010Q0010 387 nt12.64□□□□□ -0.39
NUP42P49686 BUR6YER159C 429 nt12.57□□□□□ -0.4
NUP42P49686 YKL036CYKL036C 393 nt12.52□□□□□ -0.41
NUP42P49686 TOM20YGR082W 552 nt12.47□□□□□ -0.41
NUP42P49686 URH1YDR400W 1023 nt12.46□□□□□ -0.41
NUP42P49686 LCP5YER127W 1074 nt12.46□□□□□ -0.41
NUP42P49686 YJR154WYJR154W 1041 nt12.44□□□□□ -0.42
NUP42P49686 ABZ2YMR289W 1125 nt12.42□□□□□ -0.42
NUP42P49686 SSA1YAL005C 1929 nt12.42□□□□□ -0.42
NUP42P49686 YJL027CYJL027C 417 nt12.41□□□□□ -0.42
NUP42P49686 BMT5YIL096C 1011 nt12.36□□□□□ -0.43
NUP42P49686 YIR018C-AYIR018C-A 138 nt12.35□□□□□ -0.43
NUP42P49686 AI5_BETAQ0075 1065 nt12.34□□□□□ -0.43
NUP42P49686 SRN2YLR119W 642 nt12.33□□□□□ -0.44
NUP42P49686 PAB1YER165W 1734 nt12.19□□□□□ -0.46
NUP42P49686 YJL118WYJL118W 660 nt12.18□□□□□ -0.46
NUP42P49686 FPS1YLL043W 2010 nt12.1□□□□□ -0.47
NUP42P49686 HMT1YBR034C 1047 nt12.03□□□□□ -0.48
NUP42P49686 YMR057CYMR057C 372 nt12□□□□□ -0.49
NUP42P49686 YNL067W-AYNL067W-A 147 nt11.99□□□□□ -0.49
NUP42P49686 COG1YGL223C 1254 nt11.97□□□□□ -0.49
NUP42P49686 YHM2YMR241W 945 nt11.97□□□□□ -0.49
NUP42P49686 FRE6YLL051C 2139 nt11.95□□□□□ -0.5
NUP42P49686 YPL041CYPL041C 624 nt11.92□□□□□ -0.5
NUP42P49686 ARP10YDR106W 855 nt11.9□□□□□ -0.5
NUP42P49686 UTP6YDR449C 1323 nt11.89□□□□□ -0.51
NUP42P49686 FTH1YBR207W 1398 nt11.88□□□□□ -0.51
NUP42P49686 Q0297Q0297 156 nt11.85□□□□□ -0.51
NUP42P49686 YPL071CYPL071C 471 nt11.83□□□□□ -0.52
NUP42P49686 SRX1YKL086W 384 nt11.82□□□□□ -0.52
NUP42P49686 YDR509WYDR509W 348 nt11.81□□□□□ -0.52
NUP42P49686 SEM1YDR363W-A 270 nt11.79□□□□□ -0.52
NUP42P49686 NVJ2YPR091C 2313 nt11.74□□□□□ -0.53
NUP42P49686 STB1YNL309W 1263 nt11.67□□□□□ -0.54
NUP42P49686 YTH1YPR107C 627 nt11.67□□□□□ -0.54
NUP42P49686 Q0144Q0144 330 nt11.65□□□□□ -0.54
NUP42P49686 SKG1YKR100C 1068 nt11.62□□□□□ -0.55
NUP42P49686 YBR190WYBR190W 312 nt11.62□□□□□ -0.55
NUP42P49686 BNS1YGR230W 414 nt11.6□□□□□ -0.55
NUP42P49686 DBP2YNL112W 1641 nt11.57□□□□□ -0.56
NUP42P49686 REC114YMR133W 1287 nt11.55□□□□□ -0.56
NUP42P49686 FAF1YIL019W 1041 nt11.54□□□□□ -0.56
NUP42P49686 PUS5YLR165C 765 nt11.53□□□□□ -0.56
NUP42P49686 PET20YPL159C 762 nt11.5□□□□□ -0.57
NUP42P49686 FHN1YGR131W 525 nt11.49□□□□□ -0.57
NUP42P49686 snR78snR78 87 nt11.46□□□□□ -0.57
NUP42P49686 RSC4YKR008W 1878 nt11.45□□□□□ -0.58
NUP42P49686 YJL107CYJL107C 1164 nt11.44□□□□□ -0.58
NUP42P49686 YCR099CYCR099C 468 nt11.43□□□□□ -0.58
NUP42P49686 PAC11YDR488C 1602 nt11.42□□□□□ -0.58
NUP42P49686 YDR510C-AYDR510C-A 117 nt11.42□□□□□ -0.58
NUP42P49686 SCS3YGL126W 1143 nt11.41□□□□□ -0.58
NUP42P49686 RTC3YHR087W 336 nt11.41□□□□□ -0.58
NUP42P49686 ATG17YLR423C 1254 nt11.41□□□□□ -0.58
NUP42P49686 RSM23YGL129C 1353 nt11.4□□□□□ -0.59
NUP42P49686 NAS6YGR232W 687 nt11.36□□□□□ -0.59
NUP42P49686 AST1YBL069W 1290 nt11.33□□□□□ -0.6
NUP42P49686 YNR068CYNR068C 819 nt11.31□□□□□ -0.6
NUP42P49686 THP3YPR045C 1413 nt11.3□□□□□ -0.6
NUP42P49686 RPM1RPM1 483 nt11.28□□□□□ -0.6
NUP42P49686 HOS2YGL194C 1359 nt11.26□□□□□ -0.61
NUP42P49686 YCR051WYCR051W 669 nt11.23□□□□□ -0.61
NUP42P49686 URE2YNL229C 1065 nt11.23□□□□□ -0.61
NUP42P49686 KDX1YKL161C 1302 nt11.22□□□□□ -0.61
NUP42P49686 XDJ1YLR090W 1380 nt11.22□□□□□ -0.61
NUP42P49686 YGL118CYGL118C 438 nt11.21□□□□□ -0.61
NUP42P49686 COX16YJL003W 357 nt11.18□□□□□ -0.62
NUP42P49686 APM1YPL259C 1428 nt11.16□□□□□ -0.62
NUP42P49686 SWP1YMR149W 861 nt11.15□□□□□ -0.62
NUP42P49686 AI3Q0060 1248 nt11.14□□□□□ -0.63
NUP42P49686 PIC2YER053C 903 nt11.14□□□□□ -0.63
NUP42P49686 YBL081WYBL081W 1107 nt11.13□□□□□ -0.63
NUP42P49686 YEL074WYEL074W 339 nt11.12□□□□□ -0.63
NUP42P49686 YMR147WYMR147W 672 nt11.11□□□□□ -0.63
NUP42P49686 YJL211CYJL211C 444 nt11.1□□□□□ -0.63
NUP42P49686 MOD5YOR274W 1287 nt11.08□□□□□ -0.64
NUP42P49686 EEB1YPL095C 1371 nt11.07□□□□□ -0.64
NUP42P49686 NAT5YOR253W 531 nt11.07□□□□□ -0.64
NUP42P49686 YPL168WYPL168W 1293 nt11.07□□□□□ -0.64
NUP42P49686 ICE2YIL090W 1476 nt11.06□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms