Protein–RNA interactions for Protein: P47161

VPS70, Vacuolar protein sorting-associated protein 70, yeastyeast

Predictions only

Length 811 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS70P47161 YML009W-BYML009W-B 477 nt21.86■■□□□ 1.09
VPS70P47161 NSR1YGR159C 1245 nt21.7■■□□□ 1.06
VPS70P47161 NOP1YDL014W 984 nt21.11■□□□□ 0.97
VPS70P47161 MDJ1YFL016C 1536 nt19.46■□□□□ 0.71
VPS70P47161 YKL036CYKL036C 393 nt19.44■□□□□ 0.7
VPS70P47161 SRX1YKL086W 384 nt18.46■□□□□ 0.55
VPS70P47161 Q0297Q0297 156 nt18.45■□□□□ 0.54
VPS70P47161 YJL027CYJL027C 417 nt18.17■□□□□ 0.5
VPS70P47161 Q0182Q0182 405 nt17.87■□□□□ 0.45
VPS70P47161 SCS3YGL126W 1143 nt17.76■□□□□ 0.43
VPS70P47161 MOT3YMR070W 1473 nt17.71■□□□□ 0.43
VPS70P47161 YCR051WYCR051W 669 nt17.6■□□□□ 0.41
VPS70P47161 DBP2YNL112W 1641 nt17.17■□□□□ 0.34
VPS70P47161 YOL085CYOL085C 342 nt16.87■□□□□ 0.29
VPS70P47161 TRN1tP(UGG)A 72 nt16.76■□□□□ 0.27
VPS70P47161 SUF9tP(UGG)F 72 nt16.76■□□□□ 0.27
VPS70P47161 SUF8tP(UGG)H 72 nt16.76■□□□□ 0.27
VPS70P47161 tP(UGG)LtP(UGG)L 72 nt16.76■□□□□ 0.27
VPS70P47161 SUF7tP(UGG)M 72 nt16.76■□□□□ 0.27
VPS70P47161 tP(UGG)N1tP(UGG)N1 72 nt16.76■□□□□ 0.27
VPS70P47161 tP(UGG)N2tP(UGG)N2 72 nt16.76■□□□□ 0.27
VPS70P47161 tP(UGG)O1tP(UGG)O1 72 nt16.76■□□□□ 0.27
VPS70P47161 SUF11tP(UGG)O2 72 nt16.76■□□□□ 0.27
VPS70P47161 PKP1YIL042C 1185 nt16.72■□□□□ 0.27
VPS70P47161 CCC1YLR220W 969 nt16.71■□□□□ 0.27
VPS70P47161 RPP1BYDL130W 321 nt16.59■□□□□ 0.25
VPS70P47161 YBR190WYBR190W 312 nt16.52■□□□□ 0.24
VPS70P47161 RTC3YHR087W 336 nt16.24■□□□□ 0.19
VPS70P47161 SCJ1YMR214W 1134 nt16.08■□□□□ 0.16
VPS70P47161 YGR139WYGR139W 339 nt16.06■□□□□ 0.16
VPS70P47161 RVS167YDR388W 1449 nt16.04■□□□□ 0.16
VPS70P47161 ATS1YAL020C 1002 nt15.96■□□□□ 0.15
VPS70P47161 PET122YER153C 765 nt15.92■□□□□ 0.14
VPS70P47161 NME1NME1 340 nt15.92■□□□□ 0.14
VPS70P47161 tP(UGG)O3tP(UGG)O3 72 nt15.86■□□□□ 0.13
VPS70P47161 SCR1SCR1 522 nt15.66■□□□□ 0.1
VPS70P47161 SHR5YOL110W 714 nt15.47■□□□□ 0.07
VPS70P47161 RRN5YLR141W 1092 nt15.46■□□□□ 0.07
VPS70P47161 YDJ1YNL064C 1230 nt15.27■□□□□ 0.04
VPS70P47161 DEP1YAL013W 1218 nt15.2■□□□□ 0.02
VPS70P47161 URN1YPR152C 1398 nt15.15■□□□□ 0.02
VPS70P47161 YER088W-BYER088W-B 147 nt15.14■□□□□ 0.01
VPS70P47161 PUT4YOR348C 1884 nt15.12■□□□□ 0.01
VPS70P47161 RSB1YOR049C 1065 nt15.11■□□□□ 0.01
VPS70P47161 GAR1YHR089C 618 nt15.06■□□□□ 0
VPS70P47161 SAH1YER043C 1350 nt14.9□□□□□ -0.02
VPS70P47161 OPI9YLR338W 858 nt14.9□□□□□ -0.02
VPS70P47161 ARE1YCR048W 1833 nt14.84□□□□□ -0.03
VPS70P47161 CSM2YIL132C 642 nt14.83□□□□□ -0.04
VPS70P47161 YNL208WYNL208W 600 nt14.83□□□□□ -0.04
VPS70P47161 RPN10YHR200W 807 nt14.81□□□□□ -0.04
VPS70P47161 PST2YDR032C 597 nt14.75□□□□□ -0.05
VPS70P47161 POA1YBR022W 534 nt14.69□□□□□ -0.06
VPS70P47161 YHR049C-AYHR049C-A 297 nt14.64□□□□□ -0.07
VPS70P47161 TIR1YER011W 765 nt14.52□□□□□ -0.09
VPS70P47161 PAU21YOR394W 495 nt14.47□□□□□ -0.09
VPS70P47161 PAU22YPL282C 495 nt14.47□□□□□ -0.09
VPS70P47161 PUN1YLR414C 792 nt14.44□□□□□ -0.1
VPS70P47161 YJR018WYJR018W 363 nt14.43□□□□□ -0.1
VPS70P47161 SSA1YAL005C 1929 nt14.4□□□□□ -0.1
VPS70P47161 PTC2YER089C 1395 nt14.36□□□□□ -0.11
VPS70P47161 BSC6YOL137W 1494 nt14.35□□□□□ -0.11
VPS70P47161 BUD23YCR047C 828 nt14.34□□□□□ -0.11
VPS70P47161 YKL097CYKL097C 411 nt14.28□□□□□ -0.12
VPS70P47161 ARO7YPR060C 771 nt14.27□□□□□ -0.13
VPS70P47161 SSA3YBL075C 1950 nt14.25□□□□□ -0.13
VPS70P47161 YJR120WYJR120W 351 nt14.22□□□□□ -0.13
VPS70P47161 SRB2YHR041C 633 nt14.21□□□□□ -0.13
VPS70P47161 NAB2YGL122C 1578 nt14.13□□□□□ -0.15
VPS70P47161 SHU1YHL006C 453 nt14.09□□□□□ -0.15
VPS70P47161 RPP2BYDR382W 333 nt14.08□□□□□ -0.16
VPS70P47161 FPR4YLR449W 1179 nt14□□□□□ -0.17
VPS70P47161 YAL037C-BYAL037C-B 975 nt13.99□□□□□ -0.17
VPS70P47161 FIS1YIL065C 468 nt13.94□□□□□ -0.18
VPS70P47161 DAL1YIR027C 1383 nt13.94□□□□□ -0.18
VPS70P47161 WWM1YFL010C 636 nt13.91□□□□□ -0.18
VPS70P47161 MET8YBR213W 825 nt13.9□□□□□ -0.18
VPS70P47161 INM2YDR287W 879 nt13.87□□□□□ -0.19
VPS70P47161 REG2YBR050C 1017 nt13.84□□□□□ -0.19
VPS70P47161 PHO4YFR034C 939 nt13.82□□□□□ -0.2
VPS70P47161 BDH2YAL061W 1254 nt13.79□□□□□ -0.2
VPS70P47161 YBL100CYBL100C 315 nt13.78□□□□□ -0.2
VPS70P47161 CLB6YGR109C 1143 nt13.77□□□□□ -0.21
VPS70P47161 SPT5YML010W 3192 nt13.69□□□□□ -0.22
VPS70P47161 MNP1YGL068W 585 nt13.69□□□□□ -0.22
VPS70P47161 HOM6YJR139C 1080 nt13.69□□□□□ -0.22
VPS70P47161 YGR021WYGR021W 873 nt13.68□□□□□ -0.22
VPS70P47161 YOR139CYOR139C 393 nt13.67□□□□□ -0.22
VPS70P47161 PAM17YKR065C 594 nt13.62□□□□□ -0.23
VPS70P47161 FUN26YAL022C 1554 nt13.62□□□□□ -0.23
VPS70P47161 YFL021C-AYFL021C-A 855 nt13.59□□□□□ -0.23
VPS70P47161 YPS1YLR120C 1710 nt13.57□□□□□ -0.24
VPS70P47161 TRM9YML014W 840 nt13.57□□□□□ -0.24
VPS70P47161 LSM3YLR438C-A 270 nt13.56□□□□□ -0.24
VPS70P47161 YEL009C-AYEL009C-A 408 nt13.55□□□□□ -0.24
VPS70P47161 RKM5YLR137W 1104 nt13.49□□□□□ -0.25
VPS70P47161 NPL3YDR432W 1245 nt13.48□□□□□ -0.25
VPS70P47161 YHR165W-AYHR165W-A 312 nt13.46□□□□□ -0.25
VPS70P47161 YDR095CYDR095C 411 nt13.45□□□□□ -0.26
VPS70P47161 MEP2YNL142W 1500 nt13.44□□□□□ -0.26
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms