Protein–RNA interactions for Protein: P53378

TUB4, Tubulin gamma chain, yeastyeast

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TUB4P53378 YML009W-BYML009W-B 477 nt21.16■□□□□ 0.98
TUB4P53378 NOP1YDL014W 984 nt20.72■□□□□ 0.91
TUB4P53378 NSR1YGR159C 1245 nt20.63■□□□□ 0.89
TUB4P53378 YKL036CYKL036C 393 nt19.44■□□□□ 0.7
TUB4P53378 YJL027CYJL027C 417 nt18.25■□□□□ 0.51
TUB4P53378 Q0297Q0297 156 nt18.19■□□□□ 0.5
TUB4P53378 SRX1YKL086W 384 nt18.06■□□□□ 0.48
TUB4P53378 MDJ1YFL016C 1536 nt17.98■□□□□ 0.47
TUB4P53378 SCS3YGL126W 1143 nt17.87■□□□□ 0.45
TUB4P53378 YCR051WYCR051W 669 nt17.23■□□□□ 0.35
TUB4P53378 YOL085CYOL085C 342 nt16.79■□□□□ 0.28
TUB4P53378 PKP1YIL042C 1185 nt16.53■□□□□ 0.24
TUB4P53378 RPP1BYDL130W 321 nt16.35■□□□□ 0.21
TUB4P53378 SCJ1YMR214W 1134 nt16.28■□□□□ 0.2
TUB4P53378 TRN1tP(UGG)A 72 nt16.09■□□□□ 0.17
TUB4P53378 SUF9tP(UGG)F 72 nt16.09■□□□□ 0.17
TUB4P53378 SUF8tP(UGG)H 72 nt16.09■□□□□ 0.17
TUB4P53378 tP(UGG)LtP(UGG)L 72 nt16.09■□□□□ 0.17
TUB4P53378 SUF7tP(UGG)M 72 nt16.09■□□□□ 0.17
TUB4P53378 tP(UGG)N1tP(UGG)N1 72 nt16.09■□□□□ 0.17
TUB4P53378 tP(UGG)N2tP(UGG)N2 72 nt16.09■□□□□ 0.17
TUB4P53378 tP(UGG)O1tP(UGG)O1 72 nt16.09■□□□□ 0.17
TUB4P53378 SUF11tP(UGG)O2 72 nt16.09■□□□□ 0.17
TUB4P53378 ATS1YAL020C 1002 nt16.07■□□□□ 0.16
TUB4P53378 CCC1YLR220W 969 nt16■□□□□ 0.15
TUB4P53378 DBP2YNL112W 1641 nt15.98■□□□□ 0.15
TUB4P53378 SCR1SCR1 522 nt15.58■□□□□ 0.08
TUB4P53378 PET122YER153C 765 nt15.57■□□□□ 0.08
TUB4P53378 tP(UGG)O3tP(UGG)O3 72 nt15.36■□□□□ 0.05
TUB4P53378 RVS167YDR388W 1449 nt15.26■□□□□ 0.03
TUB4P53378 YBR190WYBR190W 312 nt15.22■□□□□ 0.03
TUB4P53378 RRN5YLR141W 1092 nt15.15■□□□□ 0.02
TUB4P53378 RSB1YOR049C 1065 nt15.01□□□□□ -0.01
TUB4P53378 RTC3YHR087W 336 nt14.99□□□□□ -0.01
TUB4P53378 Q0182Q0182 405 nt14.91□□□□□ -0.02
TUB4P53378 MOT3YMR070W 1473 nt14.85□□□□□ -0.03
TUB4P53378 YER088W-BYER088W-B 147 nt14.85□□□□□ -0.03
TUB4P53378 YDJ1YNL064C 1230 nt14.84□□□□□ -0.03
TUB4P53378 PST2YDR032C 597 nt14.79□□□□□ -0.04
TUB4P53378 SHR5YOL110W 714 nt14.76□□□□□ -0.05
TUB4P53378 GAR1YHR089C 618 nt14.5□□□□□ -0.09
TUB4P53378 YGR139WYGR139W 339 nt14.48□□□□□ -0.09
TUB4P53378 YKL097CYKL097C 411 nt14.48□□□□□ -0.09
TUB4P53378 DEP1YAL013W 1218 nt14.24□□□□□ -0.13
TUB4P53378 URN1YPR152C 1398 nt14.12□□□□□ -0.15
TUB4P53378 SHU1YHL006C 453 nt14.12□□□□□ -0.15
TUB4P53378 RPN10YHR200W 807 nt14.06□□□□□ -0.16
TUB4P53378 YNL208WYNL208W 600 nt14.04□□□□□ -0.16
TUB4P53378 TIR1YER011W 765 nt13.98□□□□□ -0.17
TUB4P53378 YAL037C-BYAL037C-B 975 nt13.81□□□□□ -0.2
TUB4P53378 OPI9YLR338W 858 nt13.81□□□□□ -0.2
TUB4P53378 NME1NME1 340 nt13.77□□□□□ -0.21
TUB4P53378 YOR139CYOR139C 393 nt13.75□□□□□ -0.21
TUB4P53378 SSA1YAL005C 1929 nt13.7□□□□□ -0.22
TUB4P53378 NPL3YDR432W 1245 nt13.66□□□□□ -0.22
TUB4P53378 SAH1YER043C 1350 nt13.63□□□□□ -0.23
TUB4P53378 YJR018WYJR018W 363 nt13.5□□□□□ -0.25
TUB4P53378 YGR021WYGR021W 873 nt13.49□□□□□ -0.25
TUB4P53378 PUT4YOR348C 1884 nt13.48□□□□□ -0.25
TUB4P53378 SRB2YHR041C 633 nt13.48□□□□□ -0.25
TUB4P53378 PUN1YLR414C 792 nt13.45□□□□□ -0.26
TUB4P53378 MNP1YGL068W 585 nt13.43□□□□□ -0.26
TUB4P53378 WWM1YFL010C 636 nt13.41□□□□□ -0.26
TUB4P53378 HOM6YJR139C 1080 nt13.41□□□□□ -0.26
TUB4P53378 RPP2BYDR382W 333 nt13.38□□□□□ -0.27
TUB4P53378 YOL037CYOL037C 354 nt13.37□□□□□ -0.27
TUB4P53378 ARE1YCR048W 1833 nt13.36□□□□□ -0.27
TUB4P53378 YJR120WYJR120W 351 nt13.27□□□□□ -0.29
TUB4P53378 YHR049C-AYHR049C-A 297 nt13.26□□□□□ -0.29
TUB4P53378 RKM5YLR137W 1104 nt13.23□□□□□ -0.29
TUB4P53378 YFL021C-AYFL021C-A 855 nt13.21□□□□□ -0.29
TUB4P53378 PTC2YER089C 1395 nt13.2□□□□□ -0.3
TUB4P53378 tM(CAU)CtM(CAU)C 72 nt13.19□□□□□ -0.3
TUB4P53378 IMT4tM(CAU)E 72 nt13.19□□□□□ -0.3
TUB4P53378 IMT3tM(CAU)J3 72 nt13.19□□□□□ -0.3
TUB4P53378 IMT1tM(CAU)O1 72 nt13.19□□□□□ -0.3
TUB4P53378 IMT2tM(CAU)P 72 nt13.19□□□□□ -0.3
TUB4P53378 CSM2YIL132C 642 nt13.15□□□□□ -0.3
TUB4P53378 POA1YBR022W 534 nt13.13□□□□□ -0.31
TUB4P53378 BDH2YAL061W 1254 nt13.12□□□□□ -0.31
TUB4P53378 PUS2YGL063W 1113 nt13.03□□□□□ -0.32
TUB4P53378 BUD23YCR047C 828 nt13.02□□□□□ -0.33
TUB4P53378 LSM3YLR438C-A 270 nt13.01□□□□□ -0.33
TUB4P53378 NAB2YGL122C 1578 nt12.98□□□□□ -0.33
TUB4P53378 YLR281CYLR281C 468 nt12.98□□□□□ -0.33
TUB4P53378 SSA3YBL075C 1950 nt12.97□□□□□ -0.33
TUB4P53378 INM2YDR287W 879 nt12.96□□□□□ -0.33
TUB4P53378 FPR4YLR449W 1179 nt12.93□□□□□ -0.34
TUB4P53378 YBL100CYBL100C 315 nt12.92□□□□□ -0.34
TUB4P53378 WHI5YOR083W 888 nt12.91□□□□□ -0.34
TUB4P53378 PAU21YOR394W 495 nt12.9□□□□□ -0.34
TUB4P53378 PAU22YPL282C 495 nt12.9□□□□□ -0.34
TUB4P53378 DAL1YIR027C 1383 nt12.9□□□□□ -0.34
TUB4P53378 TRM9YML014W 840 nt12.84□□□□□ -0.35
TUB4P53378 FIS1YIL065C 468 nt12.8□□□□□ -0.36
TUB4P53378 BSC6YOL137W 1494 nt12.77□□□□□ -0.37
TUB4P53378 PHO4YFR034C 939 nt12.76□□□□□ -0.37
TUB4P53378 ARO7YPR060C 771 nt12.76□□□□□ -0.37
TUB4P53378 FUN26YAL022C 1554 nt12.76□□□□□ -0.37
TUB4P53378 FMP45YDL222C 930 nt12.71□□□□□ -0.37
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms