Protein–RNA interactions for Protein: P07834

CDC4, Cell division control protein 4, yeastyeast

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC4P07834 NSR1YGR159C 1245 nt18.96■□□□□ 0.63
CDC4P07834 YML009W-BYML009W-B 477 nt18.75■□□□□ 0.59
CDC4P07834 NOP1YDL014W 984 nt18.09■□□□□ 0.49
CDC4P07834 MDJ1YFL016C 1536 nt17.16■□□□□ 0.34
CDC4P07834 YKL036CYKL036C 393 nt16.33■□□□□ 0.2
CDC4P07834 YJL027CYJL027C 417 nt15.83■□□□□ 0.12
CDC4P07834 SRX1YKL086W 384 nt15.79■□□□□ 0.12
CDC4P07834 Q0297Q0297 156 nt15.7■□□□□ 0.1
CDC4P07834 DBP2YNL112W 1641 nt15.04■□□□□ -0
CDC4P07834 YCR051WYCR051W 669 nt14.96□□□□□ -0.01
CDC4P07834 YBR190WYBR190W 312 nt14.75□□□□□ -0.05
CDC4P07834 SCS3YGL126W 1143 nt14.66□□□□□ -0.06
CDC4P07834 TRN1tP(UGG)A 72 nt14.49□□□□□ -0.09
CDC4P07834 SUF9tP(UGG)F 72 nt14.49□□□□□ -0.09
CDC4P07834 SUF8tP(UGG)H 72 nt14.49□□□□□ -0.09
CDC4P07834 tP(UGG)LtP(UGG)L 72 nt14.49□□□□□ -0.09
CDC4P07834 SUF7tP(UGG)M 72 nt14.49□□□□□ -0.09
CDC4P07834 tP(UGG)N1tP(UGG)N1 72 nt14.49□□□□□ -0.09
CDC4P07834 tP(UGG)N2tP(UGG)N2 72 nt14.49□□□□□ -0.09
CDC4P07834 tP(UGG)O1tP(UGG)O1 72 nt14.49□□□□□ -0.09
CDC4P07834 SUF11tP(UGG)O2 72 nt14.49□□□□□ -0.09
CDC4P07834 RTC3YHR087W 336 nt14.41□□□□□ -0.1
CDC4P07834 CCC1YLR220W 969 nt14.35□□□□□ -0.11
CDC4P07834 YOL085CYOL085C 342 nt14.16□□□□□ -0.14
CDC4P07834 RPP1BYDL130W 321 nt14.1□□□□□ -0.15
CDC4P07834 RVS167YDR388W 1449 nt14.07□□□□□ -0.16
CDC4P07834 PKP1YIL042C 1185 nt13.98□□□□□ -0.17
CDC4P07834 YGR139WYGR139W 339 nt13.93□□□□□ -0.18
CDC4P07834 SCJ1YMR214W 1134 nt13.9□□□□□ -0.18
CDC4P07834 PUT4YOR348C 1884 nt13.66□□□□□ -0.22
CDC4P07834 SSA3YBL075C 1950 nt13.63□□□□□ -0.23
CDC4P07834 tP(UGG)O3tP(UGG)O3 72 nt13.6□□□□□ -0.23
CDC4P07834 PET122YER153C 765 nt13.5□□□□□ -0.25
CDC4P07834 SHR5YOL110W 714 nt13.49□□□□□ -0.25
CDC4P07834 URN1YPR152C 1398 nt13.34□□□□□ -0.27
CDC4P07834 ARE1YCR048W 1833 nt13.3□□□□□ -0.28
CDC4P07834 SCR1SCR1 522 nt13.27□□□□□ -0.29
CDC4P07834 SAH1YER043C 1350 nt13.24□□□□□ -0.29
CDC4P07834 DEP1YAL013W 1218 nt13.23□□□□□ -0.29
CDC4P07834 OPI9YLR338W 858 nt13.23□□□□□ -0.29
CDC4P07834 POA1YBR022W 534 nt13.22□□□□□ -0.29
CDC4P07834 Q0182Q0182 405 nt13.21□□□□□ -0.29
CDC4P07834 YDJ1YNL064C 1230 nt13.16□□□□□ -0.3
CDC4P07834 YHR049C-AYHR049C-A 297 nt13.13□□□□□ -0.31
CDC4P07834 RRN5YLR141W 1092 nt13.08□□□□□ -0.32
CDC4P07834 RPN10YHR200W 807 nt13.07□□□□□ -0.32
CDC4P07834 MOT3YMR070W 1473 nt13.05□□□□□ -0.32
CDC4P07834 ATS1YAL020C 1002 nt13.02□□□□□ -0.33
CDC4P07834 BSC6YOL137W 1494 nt12.99□□□□□ -0.33
CDC4P07834 YNL208WYNL208W 600 nt12.99□□□□□ -0.33
CDC4P07834 GAR1YHR089C 618 nt12.92□□□□□ -0.34
CDC4P07834 PUN1YLR414C 792 nt12.84□□□□□ -0.35
CDC4P07834 BUD23YCR047C 828 nt12.82□□□□□ -0.36
CDC4P07834 YER088W-BYER088W-B 147 nt12.82□□□□□ -0.36
CDC4P07834 PTC2YER089C 1395 nt12.75□□□□□ -0.37
CDC4P07834 NME1NME1 340 nt12.72□□□□□ -0.37
CDC4P07834 YJR018WYJR018W 363 nt12.71□□□□□ -0.37
CDC4P07834 RSB1YOR049C 1065 nt12.7□□□□□ -0.38
CDC4P07834 SPT5YML010W 3192 nt12.65□□□□□ -0.39
CDC4P07834 NAB2YGL122C 1578 nt12.64□□□□□ -0.39
CDC4P07834 TIR1YER011W 765 nt12.51□□□□□ -0.41
CDC4P07834 CSM2YIL132C 642 nt12.44□□□□□ -0.42
CDC4P07834 SSA1YAL005C 1929 nt12.43□□□□□ -0.42
CDC4P07834 VAR1Q0140 1197 nt12.41□□□□□ -0.42
CDC4P07834 YJR120WYJR120W 351 nt12.41□□□□□ -0.42
CDC4P07834 FIS1YIL065C 468 nt12.4□□□□□ -0.42
CDC4P07834 DAL1YIR027C 1383 nt12.4□□□□□ -0.42
CDC4P07834 SSA4YER103W 1929 nt12.37□□□□□ -0.43
CDC4P07834 RPP2BYDR382W 333 nt12.36□□□□□ -0.43
CDC4P07834 FPR4YLR449W 1179 nt12.36□□□□□ -0.43
CDC4P07834 INM2YDR287W 879 nt12.32□□□□□ -0.44
CDC4P07834 PHO4YFR034C 939 nt12.27□□□□□ -0.45
CDC4P07834 PAU21YOR394W 495 nt12.25□□□□□ -0.45
CDC4P07834 PAU22YPL282C 495 nt12.25□□□□□ -0.45
CDC4P07834 MEP2YNL142W 1500 nt12.24□□□□□ -0.45
CDC4P07834 YPS1YLR120C 1710 nt12.17□□□□□ -0.46
CDC4P07834 PAM17YKR065C 594 nt12.15□□□□□ -0.46
CDC4P07834 ARO7YPR060C 771 nt12.15□□□□□ -0.46
CDC4P07834 SRB2YHR041C 633 nt12.13□□□□□ -0.47
CDC4P07834 PST2YDR032C 597 nt12.12□□□□□ -0.47
CDC4P07834 YBL100CYBL100C 315 nt12.12□□□□□ -0.47
CDC4P07834 YDR509WYDR509W 348 nt12.06□□□□□ -0.48
CDC4P07834 YHR165W-AYHR165W-A 312 nt12.06□□□□□ -0.48
CDC4P07834 BDH2YAL061W 1254 nt12.05□□□□□ -0.48
CDC4P07834 DCW1YKL046C 1350 nt12.04□□□□□ -0.48
CDC4P07834 YDR095CYDR095C 411 nt12.03□□□□□ -0.48
CDC4P07834 FUN26YAL022C 1554 nt11.97□□□□□ -0.49
CDC4P07834 BDF1YLR399C 2061 nt11.92□□□□□ -0.5
CDC4P07834 WWM1YFL010C 636 nt11.89□□□□□ -0.51
CDC4P07834 TRM9YML014W 840 nt11.89□□□□□ -0.51
CDC4P07834 EMI2YDR516C 1503 nt11.88□□□□□ -0.51
CDC4P07834 ALF1YNL148C 765 nt11.88□□□□□ -0.51
CDC4P07834 REG2YBR050C 1017 nt11.88□□□□□ -0.51
CDC4P07834 YMR090WYMR090W 684 nt11.85□□□□□ -0.51
CDC4P07834 LSM3YLR438C-A 270 nt11.83□□□□□ -0.52
CDC4P07834 RPP2AYOL039W 321 nt11.82□□□□□ -0.52
CDC4P07834 PTP1YDL230W 1008 nt11.79□□□□□ -0.52
CDC4P07834 CCT6YDR188W 1641 nt11.78□□□□□ -0.52
CDC4P07834 CAC2YML102W 1407 nt11.77□□□□□ -0.52
CDC4P07834 BUR6YER159C 429 nt11.77□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms