Protein–RNA interactions for Protein: P53687

HST3, NAD-dependent histone deacetylase HST3, yeastyeast

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HST3P53687 YML009W-BYML009W-B 477 nt20.04■□□□□ 0.8
HST3P53687 NSR1YGR159C 1245 nt19.94■□□□□ 0.78
HST3P53687 NOP1YDL014W 984 nt19.48■□□□□ 0.71
HST3P53687 YKL036CYKL036C 393 nt17.99■□□□□ 0.47
HST3P53687 MDJ1YFL016C 1536 nt17.72■□□□□ 0.43
HST3P53687 Q0297Q0297 156 nt17.09■□□□□ 0.33
HST3P53687 SRX1YKL086W 384 nt17.05■□□□□ 0.32
HST3P53687 YJL027CYJL027C 417 nt16.8■□□□□ 0.28
HST3P53687 SCS3YGL126W 1143 nt16.52■□□□□ 0.24
HST3P53687 YCR051WYCR051W 669 nt16.14■□□□□ 0.17
HST3P53687 DBP2YNL112W 1641 nt15.72■□□□□ 0.11
HST3P53687 YOL085CYOL085C 342 nt15.62■□□□□ 0.09
HST3P53687 TRN1tP(UGG)A 72 nt15.43■□□□□ 0.06
HST3P53687 SUF9tP(UGG)F 72 nt15.43■□□□□ 0.06
HST3P53687 SUF8tP(UGG)H 72 nt15.43■□□□□ 0.06
HST3P53687 tP(UGG)LtP(UGG)L 72 nt15.43■□□□□ 0.06
HST3P53687 SUF7tP(UGG)M 72 nt15.43■□□□□ 0.06
HST3P53687 tP(UGG)N1tP(UGG)N1 72 nt15.43■□□□□ 0.06
HST3P53687 tP(UGG)N2tP(UGG)N2 72 nt15.43■□□□□ 0.06
HST3P53687 tP(UGG)O1tP(UGG)O1 72 nt15.43■□□□□ 0.06
HST3P53687 SUF11tP(UGG)O2 72 nt15.43■□□□□ 0.06
HST3P53687 PKP1YIL042C 1185 nt15.37■□□□□ 0.05
HST3P53687 RPP1BYDL130W 321 nt15.33■□□□□ 0.04
HST3P53687 CCC1YLR220W 969 nt15.24■□□□□ 0.03
HST3P53687 YBR190WYBR190W 312 nt15.09■□□□□ 0.01
HST3P53687 SCJ1YMR214W 1134 nt14.93□□□□□ -0.02
HST3P53687 ATS1YAL020C 1002 nt14.84□□□□□ -0.03
HST3P53687 RTC3YHR087W 336 nt14.73□□□□□ -0.05
HST3P53687 RVS167YDR388W 1449 nt14.69□□□□□ -0.06
HST3P53687 PET122YER153C 765 nt14.65□□□□□ -0.06
HST3P53687 tP(UGG)O3tP(UGG)O3 72 nt14.59□□□□□ -0.07
HST3P53687 SCR1SCR1 522 nt14.45□□□□□ -0.1
HST3P53687 RRN5YLR141W 1092 nt14.24□□□□□ -0.13
HST3P53687 SHR5YOL110W 714 nt14.21□□□□□ -0.13
HST3P53687 YDJ1YNL064C 1230 nt14.11□□□□□ -0.15
HST3P53687 YER088W-BYER088W-B 147 nt13.96□□□□□ -0.17
HST3P53687 RSB1YOR049C 1065 nt13.91□□□□□ -0.18
HST3P53687 DEP1YAL013W 1218 nt13.81□□□□□ -0.2
HST3P53687 URN1YPR152C 1398 nt13.81□□□□□ -0.2
HST3P53687 GAR1YHR089C 618 nt13.79□□□□□ -0.2
HST3P53687 YGR139WYGR139W 339 nt13.75□□□□□ -0.21
HST3P53687 PUT4YOR348C 1884 nt13.74□□□□□ -0.21
HST3P53687 PST2YDR032C 597 nt13.73□□□□□ -0.21
HST3P53687 OPI9YLR338W 858 nt13.62□□□□□ -0.23
HST3P53687 YNL208WYNL208W 600 nt13.59□□□□□ -0.23
HST3P53687 RPN10YHR200W 807 nt13.57□□□□□ -0.24
HST3P53687 SAH1YER043C 1350 nt13.54□□□□□ -0.24
HST3P53687 ARE1YCR048W 1833 nt13.49□□□□□ -0.25
HST3P53687 TIR1YER011W 765 nt13.32□□□□□ -0.28
HST3P53687 YHR049C-AYHR049C-A 297 nt13.29□□□□□ -0.28
HST3P53687 POA1YBR022W 534 nt13.29□□□□□ -0.28
HST3P53687 YKL097CYKL097C 411 nt13.25□□□□□ -0.29
HST3P53687 PUN1YLR414C 792 nt13.21□□□□□ -0.29
HST3P53687 SSA1YAL005C 1929 nt13.2□□□□□ -0.3
HST3P53687 YJR018WYJR018W 363 nt13.17□□□□□ -0.3
HST3P53687 SHU1YHL006C 453 nt13.11□□□□□ -0.31
HST3P53687 PTC2YER089C 1395 nt13.07□□□□□ -0.32
HST3P53687 YJR120WYJR120W 351 nt13.04□□□□□ -0.32
HST3P53687 Q0182Q0182 405 nt13.03□□□□□ -0.32
HST3P53687 SRB2YHR041C 633 nt13.02□□□□□ -0.33
HST3P53687 BSC6YOL137W 1494 nt13□□□□□ -0.33
HST3P53687 MOT3YMR070W 1473 nt12.97□□□□□ -0.33
HST3P53687 BUD23YCR047C 828 nt12.95□□□□□ -0.34
HST3P53687 NAB2YGL122C 1578 nt12.88□□□□□ -0.35
HST3P53687 RPP2BYDR382W 333 nt12.87□□□□□ -0.35
HST3P53687 YAL037C-BYAL037C-B 975 nt12.83□□□□□ -0.36
HST3P53687 WWM1YFL010C 636 nt12.76□□□□□ -0.37
HST3P53687 YOR139CYOR139C 393 nt12.76□□□□□ -0.37
HST3P53687 SSA3YBL075C 1950 nt12.76□□□□□ -0.37
HST3P53687 FIS1YIL065C 468 nt12.74□□□□□ -0.37
HST3P53687 DAL1YIR027C 1383 nt12.71□□□□□ -0.37
HST3P53687 NME1NME1 340 nt12.71□□□□□ -0.37
HST3P53687 INM2YDR287W 879 nt12.7□□□□□ -0.38
HST3P53687 FPR4YLR449W 1179 nt12.66□□□□□ -0.38
HST3P53687 YGR021WYGR021W 873 nt12.65□□□□□ -0.38
HST3P53687 HOM6YJR139C 1080 nt12.65□□□□□ -0.38
HST3P53687 BDH2YAL061W 1254 nt12.65□□□□□ -0.38
HST3P53687 PHO4YFR034C 939 nt12.6□□□□□ -0.39
HST3P53687 MNP1YGL068W 585 nt12.58□□□□□ -0.4
HST3P53687 YBL100CYBL100C 315 nt12.58□□□□□ -0.4
HST3P53687 YFL021C-AYFL021C-A 855 nt12.54□□□□□ -0.4
HST3P53687 NPL3YDR432W 1245 nt12.49□□□□□ -0.41
HST3P53687 LSM3YLR438C-A 270 nt12.49□□□□□ -0.41
HST3P53687 SPT5YML010W 3192 nt12.46□□□□□ -0.41
HST3P53687 FUN26YAL022C 1554 nt12.45□□□□□ -0.42
HST3P53687 RKM5YLR137W 1104 nt12.45□□□□□ -0.42
HST3P53687 TRM9YML014W 840 nt12.4□□□□□ -0.42
HST3P53687 YPS1YLR120C 1710 nt12.37□□□□□ -0.43
HST3P53687 YOL037CYOL037C 354 nt12.36□□□□□ -0.43
HST3P53687 CSM2YIL132C 642 nt12.32□□□□□ -0.44
HST3P53687 CCT6YDR188W 1641 nt12.3□□□□□ -0.44
HST3P53687 YDR095CYDR095C 411 nt12.29□□□□□ -0.44
HST3P53687 tM(CAU)CtM(CAU)C 72 nt12.23□□□□□ -0.45
HST3P53687 IMT4tM(CAU)E 72 nt12.23□□□□□ -0.45
HST3P53687 IMT3tM(CAU)J3 72 nt12.23□□□□□ -0.45
HST3P53687 IMT1tM(CAU)O1 72 nt12.23□□□□□ -0.45
HST3P53687 IMT2tM(CAU)P 72 nt12.23□□□□□ -0.45
HST3P53687 ALF1YNL148C 765 nt12.22□□□□□ -0.45
HST3P53687 MEP2YNL142W 1500 nt12.2□□□□□ -0.46
HST3P53687 YHR165W-AYHR165W-A 312 nt12.19□□□□□ -0.46
Retrieved 100 of 7,029 protein–RNA pairs in 8.1 ms