Protein–RNA interactions for Protein: P20604

SIT4, Serine/threonine-protein phosphatase PP1-1, yeastyeast

Predictions only

Length 311 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIT4P20604 YML009W-BYML009W-B 477 nt25.13■■□□□ 1.61
SIT4P20604 NOP1YDL014W 984 nt24.64■■□□□ 1.54
SIT4P20604 NSR1YGR159C 1245 nt24.46■■□□□ 1.51
SIT4P20604 YKL036CYKL036C 393 nt23.23■■□□□ 1.31
SIT4P20604 YJL027CYJL027C 417 nt21.82■■□□□ 1.08
SIT4P20604 Q0297Q0297 156 nt21.69■■□□□ 1.06
SIT4P20604 SRX1YKL086W 384 nt21.5■■□□□ 1.03
SIT4P20604 SCS3YGL126W 1143 nt21.39■■□□□ 1.01
SIT4P20604 MDJ1YFL016C 1536 nt21.23■□□□□ 0.99
SIT4P20604 YCR051WYCR051W 669 nt20.52■□□□□ 0.88
SIT4P20604 YOL085CYOL085C 342 nt20.11■□□□□ 0.81
SIT4P20604 PKP1YIL042C 1185 nt19.8■□□□□ 0.76
SIT4P20604 SCJ1YMR214W 1134 nt19.58■□□□□ 0.72
SIT4P20604 RPP1BYDL130W 321 nt19.49■□□□□ 0.71
SIT4P20604 ATS1YAL020C 1002 nt19.31■□□□□ 0.68
SIT4P20604 TRN1tP(UGG)A 72 nt19.08■□□□□ 0.64
SIT4P20604 SUF9tP(UGG)F 72 nt19.08■□□□□ 0.64
SIT4P20604 SUF8tP(UGG)H 72 nt19.08■□□□□ 0.64
SIT4P20604 tP(UGG)LtP(UGG)L 72 nt19.08■□□□□ 0.64
SIT4P20604 SUF7tP(UGG)M 72 nt19.08■□□□□ 0.64
SIT4P20604 tP(UGG)N1tP(UGG)N1 72 nt19.08■□□□□ 0.64
SIT4P20604 tP(UGG)N2tP(UGG)N2 72 nt19.08■□□□□ 0.64
SIT4P20604 tP(UGG)O1tP(UGG)O1 72 nt19.08■□□□□ 0.64
SIT4P20604 SUF11tP(UGG)O2 72 nt19.08■□□□□ 0.64
SIT4P20604 CCC1YLR220W 969 nt19.05■□□□□ 0.64
SIT4P20604 DBP2YNL112W 1641 nt18.95■□□□□ 0.62
SIT4P20604 PET122YER153C 765 nt18.57■□□□□ 0.56
SIT4P20604 SCR1SCR1 522 nt18.55■□□□□ 0.56
SIT4P20604 tP(UGG)O3tP(UGG)O3 72 nt18.29■□□□□ 0.52
SIT4P20604 RRN5YLR141W 1092 nt18.13■□□□□ 0.49
SIT4P20604 RVS167YDR388W 1449 nt18■□□□□ 0.47
SIT4P20604 RSB1YOR049C 1065 nt17.93■□□□□ 0.46
SIT4P20604 YBR190WYBR190W 312 nt17.93■□□□□ 0.46
SIT4P20604 RTC3YHR087W 336 nt17.92■□□□□ 0.46
SIT4P20604 PST2YDR032C 597 nt17.78■□□□□ 0.44
SIT4P20604 YER088W-BYER088W-B 147 nt17.75■□□□□ 0.43
SIT4P20604 YDJ1YNL064C 1230 nt17.64■□□□□ 0.41
SIT4P20604 SHR5YOL110W 714 nt17.47■□□□□ 0.39
SIT4P20604 YKL097CYKL097C 411 nt17.38■□□□□ 0.37
SIT4P20604 GAR1YHR089C 618 nt17.25■□□□□ 0.35
SIT4P20604 SHU1YHL006C 453 nt16.94■□□□□ 0.3
SIT4P20604 DEP1YAL013W 1218 nt16.89■□□□□ 0.29
SIT4P20604 URN1YPR152C 1398 nt16.68■□□□□ 0.26
SIT4P20604 YNL208WYNL208W 600 nt16.62■□□□□ 0.25
SIT4P20604 TIR1YER011W 765 nt16.61■□□□□ 0.25
SIT4P20604 YAL037C-BYAL037C-B 975 nt16.59■□□□□ 0.25
SIT4P20604 YOR139CYOR139C 393 nt16.56■□□□□ 0.24
SIT4P20604 RPN10YHR200W 807 nt16.54■□□□□ 0.24
SIT4P20604 NPL3YDR432W 1245 nt16.35■□□□□ 0.21
SIT4P20604 SSA1YAL005C 1929 nt16.29■□□□□ 0.2
SIT4P20604 OPI9YLR338W 858 nt16.28■□□□□ 0.2
SIT4P20604 SRB2YHR041C 633 nt16.1■□□□□ 0.17
SIT4P20604 SAH1YER043C 1350 nt16.09■□□□□ 0.17
SIT4P20604 MNP1YGL068W 585 nt16.01■□□□□ 0.15
SIT4P20604 YGR021WYGR021W 873 nt16.01■□□□□ 0.15
SIT4P20604 WWM1YFL010C 636 nt15.99■□□□□ 0.15
SIT4P20604 HOM6YJR139C 1080 nt15.98■□□□□ 0.15
SIT4P20604 YJR018WYJR018W 363 nt15.95■□□□□ 0.14
SIT4P20604 YOL037CYOL037C 354 nt15.92■□□□□ 0.14
SIT4P20604 tM(CAU)CtM(CAU)C 72 nt15.9■□□□□ 0.14
SIT4P20604 IMT4tM(CAU)E 72 nt15.9■□□□□ 0.14
SIT4P20604 IMT3tM(CAU)J3 72 nt15.9■□□□□ 0.14
SIT4P20604 IMT1tM(CAU)O1 72 nt15.9■□□□□ 0.14
SIT4P20604 IMT2tM(CAU)P 72 nt15.9■□□□□ 0.14
SIT4P20604 PUT4YOR348C 1884 nt15.82■□□□□ 0.12
SIT4P20604 PUN1YLR414C 792 nt15.82■□□□□ 0.12
SIT4P20604 RPP2BYDR382W 333 nt15.79■□□□□ 0.12
SIT4P20604 RKM5YLR137W 1104 nt15.76■□□□□ 0.11
SIT4P20604 YJR120WYJR120W 351 nt15.74■□□□□ 0.11
SIT4P20604 ARE1YCR048W 1833 nt15.73■□□□□ 0.11
SIT4P20604 YFL021C-AYFL021C-A 855 nt15.67■□□□□ 0.1
SIT4P20604 PUS2YGL063W 1113 nt15.64■□□□□ 0.09
SIT4P20604 PTC2YER089C 1395 nt15.59■□□□□ 0.09
SIT4P20604 Q0182Q0182 405 nt15.57■□□□□ 0.08
SIT4P20604 YHR049C-AYHR049C-A 297 nt15.55■□□□□ 0.08
SIT4P20604 YLR281CYLR281C 468 nt15.55■□□□□ 0.08
SIT4P20604 BDH2YAL061W 1254 nt15.52■□□□□ 0.08
SIT4P20604 MOT3YMR070W 1473 nt15.51■□□□□ 0.07
SIT4P20604 POA1YBR022W 534 nt15.47■□□□□ 0.07
SIT4P20604 SSA3YBL075C 1950 nt15.44■□□□□ 0.06
SIT4P20604 WHI5YOR083W 888 nt15.44■□□□□ 0.06
SIT4P20604 LSM3YLR438C-A 270 nt15.43■□□□□ 0.06
SIT4P20604 BSC6YOL137W 1494 nt15.33■□□□□ 0.04
SIT4P20604 BUD23YCR047C 828 nt15.31■□□□□ 0.04
SIT4P20604 INM2YDR287W 879 nt15.31■□□□□ 0.04
SIT4P20604 NAB2YGL122C 1578 nt15.27■□□□□ 0.03
SIT4P20604 FPR4YLR449W 1179 nt15.26■□□□□ 0.03
SIT4P20604 YBL100CYBL100C 315 nt15.25■□□□□ 0.03
SIT4P20604 FMP45YDL222C 930 nt15.23■□□□□ 0.03
SIT4P20604 TRM9YML014W 840 nt15.2■□□□□ 0.02
SIT4P20604 YPR011CYPR011C 981 nt15.18■□□□□ 0.02
SIT4P20604 DAL1YIR027C 1383 nt15.17■□□□□ 0.02
SIT4P20604 DSK2YMR276W 1122 nt15.15■□□□□ 0.02
SIT4P20604 FUN26YAL022C 1554 nt15.09■□□□□ 0.01
SIT4P20604 YCH1YGR203W 447 nt15.08■□□□□ 0
SIT4P20604 YLR236CYLR236C 324 nt15.06■□□□□ 0
SIT4P20604 IMP2'YIL154C 1041 nt15.05■□□□□ -0
SIT4P20604 FIS1YIL065C 468 nt15.04■□□□□ -0
SIT4P20604 YLR154C-GYLR154C-G 150 nt15.03■□□□□ -0
SIT4P20604 PHO4YFR034C 939 nt15.01□□□□□ -0.01
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms