Protein–RNA interactions for Protein: P46673

NUP85, Nucleoporin NUP85, yeastyeast

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP85P46673 YML009W-BYML009W-B 477 nt20■□□□□ 0.79
NUP85P46673 NSR1YGR159C 1245 nt19.69■□□□□ 0.74
NUP85P46673 NOP1YDL014W 984 nt19.61■□□□□ 0.73
NUP85P46673 YKL036CYKL036C 393 nt18.27■□□□□ 0.52
NUP85P46673 MDJ1YFL016C 1536 nt17.69■□□□□ 0.42
NUP85P46673 Q0297Q0297 156 nt17.19■□□□□ 0.34
NUP85P46673 YJL027CYJL027C 417 nt17.11■□□□□ 0.33
NUP85P46673 SRX1YKL086W 384 nt17.09■□□□□ 0.33
NUP85P46673 SCS3YGL126W 1143 nt16.71■□□□□ 0.27
NUP85P46673 YCR051WYCR051W 669 nt16.24■□□□□ 0.19
NUP85P46673 YOL085CYOL085C 342 nt15.79■□□□□ 0.12
NUP85P46673 DBP2YNL112W 1641 nt15.56■□□□□ 0.08
NUP85P46673 PKP1YIL042C 1185 nt15.5■□□□□ 0.07
NUP85P46673 RPP1BYDL130W 321 nt15.43■□□□□ 0.06
NUP85P46673 TRN1tP(UGG)A 72 nt15.28■□□□□ 0.04
NUP85P46673 SUF9tP(UGG)F 72 nt15.28■□□□□ 0.04
NUP85P46673 SUF8tP(UGG)H 72 nt15.28■□□□□ 0.04
NUP85P46673 tP(UGG)LtP(UGG)L 72 nt15.28■□□□□ 0.04
NUP85P46673 SUF7tP(UGG)M 72 nt15.28■□□□□ 0.04
NUP85P46673 tP(UGG)N1tP(UGG)N1 72 nt15.28■□□□□ 0.04
NUP85P46673 tP(UGG)N2tP(UGG)N2 72 nt15.28■□□□□ 0.04
NUP85P46673 tP(UGG)O1tP(UGG)O1 72 nt15.28■□□□□ 0.04
NUP85P46673 SUF11tP(UGG)O2 72 nt15.28■□□□□ 0.04
NUP85P46673 SCJ1YMR214W 1134 nt15.17■□□□□ 0.02
NUP85P46673 CCC1YLR220W 969 nt15.14■□□□□ 0.01
NUP85P46673 YBR190WYBR190W 312 nt15.08■□□□□ 0
NUP85P46673 ATS1YAL020C 1002 nt15.03■□□□□ -0
NUP85P46673 RTC3YHR087W 336 nt14.74□□□□□ -0.05
NUP85P46673 PET122YER153C 765 nt14.67□□□□□ -0.06
NUP85P46673 SCR1SCR1 522 nt14.67□□□□□ -0.06
NUP85P46673 RVS167YDR388W 1449 nt14.55□□□□□ -0.08
NUP85P46673 tP(UGG)O3tP(UGG)O3 72 nt14.54□□□□□ -0.08
NUP85P46673 RRN5YLR141W 1092 nt14.29□□□□□ -0.12
NUP85P46673 YDJ1YNL064C 1230 nt14.09□□□□□ -0.15
NUP85P46673 RSB1YOR049C 1065 nt14.09□□□□□ -0.15
NUP85P46673 SHR5YOL110W 714 nt14.05□□□□□ -0.16
NUP85P46673 YER088W-BYER088W-B 147 nt14.01□□□□□ -0.17
NUP85P46673 PUT4YOR348C 1884 nt13.94□□□□□ -0.18
NUP85P46673 PST2YDR032C 597 nt13.86□□□□□ -0.19
NUP85P46673 URN1YPR152C 1398 nt13.73□□□□□ -0.21
NUP85P46673 GAR1YHR089C 618 nt13.72□□□□□ -0.21
NUP85P46673 SSA3YBL075C 1950 nt13.69□□□□□ -0.22
NUP85P46673 DEP1YAL013W 1218 nt13.68□□□□□ -0.22
NUP85P46673 ARE1YCR048W 1833 nt13.62□□□□□ -0.23
NUP85P46673 SAH1YER043C 1350 nt13.58□□□□□ -0.24
NUP85P46673 OPI9YLR338W 858 nt13.57□□□□□ -0.24
NUP85P46673 YKL097CYKL097C 411 nt13.48□□□□□ -0.25
NUP85P46673 POA1YBR022W 534 nt13.48□□□□□ -0.25
NUP85P46673 YHR049C-AYHR049C-A 297 nt13.44□□□□□ -0.26
NUP85P46673 RPN10YHR200W 807 nt13.42□□□□□ -0.26
NUP85P46673 YNL208WYNL208W 600 nt13.4□□□□□ -0.26
NUP85P46673 YGR139WYGR139W 339 nt13.38□□□□□ -0.27
NUP85P46673 TIR1YER011W 765 nt13.25□□□□□ -0.29
NUP85P46673 BSC6YOL137W 1494 nt13.24□□□□□ -0.29
NUP85P46673 SHU1YHL006C 453 nt13.23□□□□□ -0.29
NUP85P46673 Q0182Q0182 405 nt13.15□□□□□ -0.3
NUP85P46673 PUN1YLR414C 792 nt13.15□□□□□ -0.3
NUP85P46673 BUD23YCR047C 828 nt13.09□□□□□ -0.31
NUP85P46673 YJR018WYJR018W 363 nt13.07□□□□□ -0.32
NUP85P46673 PTC2YER089C 1395 nt13.07□□□□□ -0.32
NUP85P46673 SSA1YAL005C 1929 nt13□□□□□ -0.33
NUP85P46673 YAL037C-BYAL037C-B 975 nt12.94□□□□□ -0.34
NUP85P46673 NAB2YGL122C 1578 nt12.91□□□□□ -0.34
NUP85P46673 MOT3YMR070W 1473 nt12.91□□□□□ -0.34
NUP85P46673 YJR120WYJR120W 351 nt12.9□□□□□ -0.34
NUP85P46673 SPT5YML010W 3192 nt12.83□□□□□ -0.36
NUP85P46673 YOR139CYOR139C 393 nt12.83□□□□□ -0.36
NUP85P46673 SRB2YHR041C 633 nt12.77□□□□□ -0.37
NUP85P46673 RPP2BYDR382W 333 nt12.76□□□□□ -0.37
NUP85P46673 NPL3YDR432W 1245 nt12.75□□□□□ -0.37
NUP85P46673 YGR021WYGR021W 873 nt12.75□□□□□ -0.37
NUP85P46673 FIS1YIL065C 468 nt12.75□□□□□ -0.37
NUP85P46673 DAL1YIR027C 1383 nt12.69□□□□□ -0.38
NUP85P46673 WWM1YFL010C 636 nt12.68□□□□□ -0.38
NUP85P46673 FPR4YLR449W 1179 nt12.68□□□□□ -0.38
NUP85P46673 HOM6YJR139C 1080 nt12.66□□□□□ -0.38
NUP85P46673 PHO4YFR034C 939 nt12.61□□□□□ -0.39
NUP85P46673 MNP1YGL068W 585 nt12.61□□□□□ -0.39
NUP85P46673 INM2YDR287W 879 nt12.6□□□□□ -0.39
NUP85P46673 YOL037CYOL037C 354 nt12.57□□□□□ -0.4
NUP85P46673 YFL021C-AYFL021C-A 855 nt12.52□□□□□ -0.41
NUP85P46673 BDH2YAL061W 1254 nt12.5□□□□□ -0.41
NUP85P46673 RKM5YLR137W 1104 nt12.49□□□□□ -0.41
NUP85P46673 YBL100CYBL100C 315 nt12.48□□□□□ -0.41
NUP85P46673 SSA4YER103W 1929 nt12.46□□□□□ -0.42
NUP85P46673 NME1NME1 340 nt12.45□□□□□ -0.42
NUP85P46673 MEP2YNL142W 1500 nt12.44□□□□□ -0.42
NUP85P46673 YPS1YLR120C 1710 nt12.44□□□□□ -0.42
NUP85P46673 LSM3YLR438C-A 270 nt12.41□□□□□ -0.42
NUP85P46673 tM(CAU)CtM(CAU)C 72 nt12.33□□□□□ -0.44
NUP85P46673 IMT4tM(CAU)E 72 nt12.33□□□□□ -0.44
NUP85P46673 IMT3tM(CAU)J3 72 nt12.33□□□□□ -0.44
NUP85P46673 IMT1tM(CAU)O1 72 nt12.33□□□□□ -0.44
NUP85P46673 IMT2tM(CAU)P 72 nt12.33□□□□□ -0.44
NUP85P46673 FUN26YAL022C 1554 nt12.33□□□□□ -0.44
NUP85P46673 YDR095CYDR095C 411 nt12.32□□□□□ -0.44
NUP85P46673 YHR165W-AYHR165W-A 312 nt12.31□□□□□ -0.44
NUP85P46673 DCW1YKL046C 1350 nt12.29□□□□□ -0.44
NUP85P46673 TRM9YML014W 840 nt12.25□□□□□ -0.45
NUP85P46673 YLR281CYLR281C 468 nt12.22□□□□□ -0.45
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms