Protein–RNA interactions for Protein: P43639

CKB1, Casein kinase II subunit beta, yeastyeast

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CKB1P43639 YML009W-BYML009W-B 477 nt30.48■■■□□ 2.47
CKB1P43639 NSR1YGR159C 1245 nt29.81■■■□□ 2.36
CKB1P43639 NOP1YDL014W 984 nt29.79■■■□□ 2.36
CKB1P43639 YKL036CYKL036C 393 nt28.04■■■□□ 2.08
CKB1P43639 Q0297Q0297 156 nt26.32■■□□□ 1.8
CKB1P43639 YJL027CYJL027C 417 nt26.27■■□□□ 1.8
CKB1P43639 SRX1YKL086W 384 nt26.09■■□□□ 1.77
CKB1P43639 MDJ1YFL016C 1536 nt26.01■■□□□ 1.75
CKB1P43639 SCS3YGL126W 1143 nt25.83■■□□□ 1.73
CKB1P43639 YCR051WYCR051W 669 nt24.79■■□□□ 1.56
CKB1P43639 YOL085CYOL085C 342 nt24.32■■□□□ 1.48
CKB1P43639 PKP1YIL042C 1185 nt23.9■■□□□ 1.42
CKB1P43639 RPP1BYDL130W 321 nt23.61■■□□□ 1.37
CKB1P43639 SCJ1YMR214W 1134 nt23.51■■□□□ 1.35
CKB1P43639 TRN1tP(UGG)A 72 nt23.28■■□□□ 1.32
CKB1P43639 SUF9tP(UGG)F 72 nt23.28■■□□□ 1.32
CKB1P43639 SUF8tP(UGG)H 72 nt23.28■■□□□ 1.32
CKB1P43639 tP(UGG)LtP(UGG)L 72 nt23.28■■□□□ 1.32
CKB1P43639 SUF7tP(UGG)M 72 nt23.28■■□□□ 1.32
CKB1P43639 tP(UGG)N1tP(UGG)N1 72 nt23.28■■□□□ 1.32
CKB1P43639 tP(UGG)N2tP(UGG)N2 72 nt23.28■■□□□ 1.32
CKB1P43639 tP(UGG)O1tP(UGG)O1 72 nt23.28■■□□□ 1.32
CKB1P43639 SUF11tP(UGG)O2 72 nt23.28■■□□□ 1.32
CKB1P43639 DBP2YNL112W 1641 nt23.28■■□□□ 1.32
CKB1P43639 ATS1YAL020C 1002 nt23.26■■□□□ 1.31
CKB1P43639 CCC1YLR220W 969 nt23.06■■□□□ 1.28
CKB1P43639 PET122YER153C 765 nt22.53■■□□□ 1.2
CKB1P43639 SCR1SCR1 522 nt22.34■■□□□ 1.17
CKB1P43639 tP(UGG)O3tP(UGG)O3 72 nt22.22■■□□□ 1.15
CKB1P43639 YBR190WYBR190W 312 nt21.99■■□□□ 1.11
CKB1P43639 RRN5YLR141W 1092 nt21.94■■□□□ 1.1
CKB1P43639 RVS167YDR388W 1449 nt21.87■■□□□ 1.09
CKB1P43639 RSB1YOR049C 1065 nt21.61■■□□□ 1.05
CKB1P43639 YER088W-BYER088W-B 147 nt21.52■■□□□ 1.04
CKB1P43639 RTC3YHR087W 336 nt21.52■■□□□ 1.04
CKB1P43639 PST2YDR032C 597 nt21.47■■□□□ 1.03
CKB1P43639 YDJ1YNL064C 1230 nt21.46■■□□□ 1.03
CKB1P43639 SHR5YOL110W 714 nt21.29■■□□□ 1
CKB1P43639 GAR1YHR089C 618 nt20.92■□□□□ 0.94
CKB1P43639 YKL097CYKL097C 411 nt20.85■□□□□ 0.93
CKB1P43639 DEP1YAL013W 1218 nt20.55■□□□□ 0.88
CKB1P43639 SHU1YHL006C 453 nt20.48■□□□□ 0.87
CKB1P43639 URN1YPR152C 1398 nt20.37■□□□□ 0.85
CKB1P43639 YNL208WYNL208W 600 nt20.24■□□□□ 0.83
CKB1P43639 TIR1YER011W 765 nt20.18■□□□□ 0.82
CKB1P43639 RPN10YHR200W 807 nt20.12■□□□□ 0.81
CKB1P43639 YAL037C-BYAL037C-B 975 nt20.02■□□□□ 0.8
CKB1P43639 YOR139CYOR139C 393 nt20■□□□□ 0.79
CKB1P43639 OPI9YLR338W 858 nt19.96■□□□□ 0.79
CKB1P43639 SSA1YAL005C 1929 nt19.88■□□□□ 0.77
CKB1P43639 SAH1YER043C 1350 nt19.73■□□□□ 0.75
CKB1P43639 SRB2YHR041C 633 nt19.73■□□□□ 0.75
CKB1P43639 NPL3YDR432W 1245 nt19.61■□□□□ 0.73
CKB1P43639 PUT4YOR348C 1884 nt19.6■□□□□ 0.73
CKB1P43639 YJR018WYJR018W 363 nt19.46■□□□□ 0.71
CKB1P43639 MNP1YGL068W 585 nt19.43■□□□□ 0.7
CKB1P43639 HOM6YJR139C 1080 nt19.43■□□□□ 0.7
CKB1P43639 ARE1YCR048W 1833 nt19.43■□□□□ 0.7
CKB1P43639 WWM1YFL010C 636 nt19.42■□□□□ 0.7
CKB1P43639 YGR021WYGR021W 873 nt19.39■□□□□ 0.69
CKB1P43639 YJR120WYJR120W 351 nt19.38■□□□□ 0.69
CKB1P43639 PUN1YLR414C 792 nt19.35■□□□□ 0.69
CKB1P43639 YOL037CYOL037C 354 nt19.24■□□□□ 0.67
CKB1P43639 tM(CAU)CtM(CAU)C 72 nt19.17■□□□□ 0.66
CKB1P43639 IMT4tM(CAU)E 72 nt19.17■□□□□ 0.66
CKB1P43639 IMT3tM(CAU)J3 72 nt19.17■□□□□ 0.66
CKB1P43639 IMT1tM(CAU)O1 72 nt19.17■□□□□ 0.66
CKB1P43639 IMT2tM(CAU)P 72 nt19.17■□□□□ 0.66
CKB1P43639 RPP2BYDR382W 333 nt19.16■□□□□ 0.66
CKB1P43639 YHR049C-AYHR049C-A 297 nt19.13■□□□□ 0.65
CKB1P43639 RKM5YLR137W 1104 nt19.13■□□□□ 0.65
CKB1P43639 SSA3YBL075C 1950 nt19.08■□□□□ 0.65
CKB1P43639 PTC2YER089C 1395 nt19.06■□□□□ 0.64
CKB1P43639 YFL021C-AYFL021C-A 855 nt19.04■□□□□ 0.64
CKB1P43639 POA1YBR022W 534 nt19.04■□□□□ 0.64
CKB1P43639 BDH2YAL061W 1254 nt18.92■□□□□ 0.62
CKB1P43639 YLR281CYLR281C 468 nt18.82■□□□□ 0.6
CKB1P43639 PUS2YGL063W 1113 nt18.81■□□□□ 0.6
CKB1P43639 LSM3YLR438C-A 270 nt18.77■□□□□ 0.6
CKB1P43639 BUD23YCR047C 828 nt18.72■□□□□ 0.59
CKB1P43639 NAB2YGL122C 1578 nt18.71■□□□□ 0.59
CKB1P43639 INM2YDR287W 879 nt18.67■□□□□ 0.58
CKB1P43639 WHI5YOR083W 888 nt18.67■□□□□ 0.58
CKB1P43639 MOT3YMR070W 1473 nt18.62■□□□□ 0.57
CKB1P43639 YBL100CYBL100C 315 nt18.6■□□□□ 0.57
CKB1P43639 DAL1YIR027C 1383 nt18.58■□□□□ 0.57
CKB1P43639 FIS1YIL065C 468 nt18.55■□□□□ 0.56
CKB1P43639 FPR4YLR449W 1179 nt18.55■□□□□ 0.56
CKB1P43639 BSC6YOL137W 1494 nt18.5■□□□□ 0.55
CKB1P43639 TRM9YML014W 840 nt18.45■□□□□ 0.54
CKB1P43639 YPR011CYPR011C 981 nt18.44■□□□□ 0.54
CKB1P43639 FUN26YAL022C 1554 nt18.42■□□□□ 0.54
CKB1P43639 PHO4YFR034C 939 nt18.42■□□□□ 0.54
CKB1P43639 Q0182Q0182 405 nt18.39■□□□□ 0.53
CKB1P43639 FMP45YDL222C 930 nt18.33■□□□□ 0.52
CKB1P43639 YLR236CYLR236C 324 nt18.31■□□□□ 0.52
CKB1P43639 DSK2YMR276W 1122 nt18.31■□□□□ 0.52
CKB1P43639 CCT6YDR188W 1641 nt18.26■□□□□ 0.51
CKB1P43639 YLR154C-GYLR154C-G 150 nt18.25■□□□□ 0.51
CKB1P43639 IMP2'YIL154C 1041 nt18.17■□□□□ 0.5
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms